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Transcript | Name | Description | Predicted domains | Domain count |
---|---|---|---|---|
– | Retropepsin-like protein [Phaseolus vulgaris] gi|396582334|gb|AFN88198.1| | 4 | ||
– | Retropepsin-like protein [Phaseolus vulgaris] gi|396582334|gb|AFN88198.1| | 4 | ||
– | Retropepsin-like protein [Phaseolus vulgaris] gi|396582334|gb|AFN88198.1| | 3 | ||
– | Retropepsin-like protein [Phaseolus vulgaris] gi|396582334|gb|AFN88198.1| | 4 | ||
– | Hydrogenobyrinate a,c-diamide synthase; TAIR: AT1G13630.2 Tetratricopeptide repeat (TPR)-like superfamily protein; Swiss-Prot: sp|Q2JHS8|Y2931_SYNJB UPF0754 membrane protein CYB_2931; TrEMBL-Plants: tr|U5CUI2|U5CUI2_AMBTC Uncharacterized protein; Found in the gene: LotjaGi1g1v0096600_LC | 5 | ||
– | Transposon Ty3-I Gag-Pol polyprotein; TAIR: AT2G06105.1 aspartyl protease gag-polyprotein; Swiss-Prot: sp|Q754R2|DDI1_ASHGO DNA damage-inducible protein 1; TrEMBL-Plants: tr|A0A1B5Z879|A0A1B5Z879_TRISU Uncharacterized protein; Found in the gene: LotjaGi1g1v0173400 | 10 | ||
– | Transposon Ty3-I Gag-Pol polyprotein; TAIR: AT2G06105.1 aspartyl protease gag-polyprotein; Swiss-Prot: sp|Q754R2|DDI1_ASHGO DNA damage-inducible protein 1; TrEMBL-Plants: tr|A0A1B5Z879|A0A1B5Z879_TRISU Uncharacterized protein; Found in the gene: LotjaGi1g1v0173400 | 10 | ||
– | Retrotransposon gag protein; TAIR: AT1G29030.1 Apoptosis inhibitory protein 5 (API5); Swiss-Prot: sp|B7KUA4|ATPA_METC4 ATP synthase subunit alpha; TrEMBL-Plants: tr|A0A1D6DKT5|A0A1D6DKT5_WHEAT Uncharacterized protein; Found in the gene: LotjaGi1g1v0203600_LC | 6 | ||
– | Retrovirus-related Pol polyprotein from transposon opus; TAIR: AT3G14370.1 Protein kinase superfamily protein; Swiss-Prot: sp|Q6FQE9|DDI1_CANGA DNA damage-inducible protein 1; TrEMBL-Plants: tr|A0A0S3QWS7|A0A0S3QWS7_PHAAN Uncharacterized protein; Found in the gene: LotjaGi1g1v0289800_LC | 6 | ||
– | Retrovirus-related Pol polyprotein from transposon opus; TAIR: AT2G06105.1 aspartyl protease gag-polyprotein; Swiss-Prot: sp|P13010|XRCC5_HUMAN X-ray repair cross-complementing protein 5; TrEMBL-Plants: tr|A0A151R285|A0A151R285_CAJCA Uncharacterized protein; Found in the gene: LotjaGi1g1v0299900_LC | 6 | ||
– | Transposon Ty3-I Gag-Pol polyprotein; TAIR: AT2G06105.1 aspartyl protease gag-polyprotein; Swiss-Prot: sp|Q4WGS4|DDI1_ASPFU DNA damage-inducible protein 1; TrEMBL-Plants: tr|A0A151R7N2|A0A151R7N2_CAJCA Uncharacterized protein; Found in the gene: LotjaGi1g1v0337000 | 11 | ||
– | Transposon Ty3-I Gag-Pol polyprotein; TAIR: AT2G06105.1 aspartyl protease gag-polyprotein; Swiss-Prot: sp|Q4WGS4|DDI1_ASPFU DNA damage-inducible protein 1; TrEMBL-Plants: tr|A0A151R7N2|A0A151R7N2_CAJCA Uncharacterized protein; Found in the gene: LotjaGi1g1v0337000 | 11 | ||
– | Transposable element protein, putative, Retrotrans_gag; TAIR: AT2G03880.1 Pentatricopeptide repeat (PPR) superfamily protein; Swiss-Prot: sp|Q03R43|SYA_LACBA Alanine--tRNA ligase; TrEMBL-Plants: tr|A0A151T4H0|A0A151T4H0_CAJCA Uncharacterized protein; Found in the gene: LotjaGi1g1v0678300_LC | 5 | ||
– | Transposable element protein, putative; TAIR: AT2G36370.1 ubiquitin-protein ligase; Swiss-Prot: sp|Q8S8F2|FBL11_ARATH BTB/POZ domain-containing protein FBL11; TrEMBL-Plants: tr|A0A061EW79|A0A061EW79_THECC Uncharacterized protein; Found in the gene: LotjaGi1g1v0678400_LC | 4 | ||
– | Retrovirus-related Pol polyprotein from transposon opus; TAIR: AT2G06105.1 aspartyl protease gag-polyprotein; Swiss-Prot: sp|Q4WGS4|DDI1_ASPFU DNA damage-inducible protein 1; TrEMBL-Plants: tr|A0A0S3QWS7|A0A0S3QWS7_PHAAN Uncharacterized protein; Found in the gene: LotjaGi2g1v0014500_LC | 7 | ||
– | Retrovirus-related Pol polyprotein from transposon opus; TAIR: AT2G06105.1 aspartyl protease gag-polyprotein; Swiss-Prot: sp|A1DCU5|DDI1_NEOFI DNA damage-inducible protein 1; TrEMBL-Plants: tr|A0A0S3QWS7|A0A0S3QWS7_PHAAN Uncharacterized protein; Found in the gene: LotjaGi2g1v0062500_LC | 7 | ||
– | Transposable element protein, putative, Retrotrans_gag; TAIR: AT4G31920.1 response regulator 10; Swiss-Prot: sp|A5DHT2|RPB2_PICGU DNA-directed RNA polymerase II subunit RPB2; TrEMBL-Plants: tr|U5CUI2|U5CUI2_AMBTC Uncharacterized protein; Found in the gene: LotjaGi2g1v0187700_LC | 4 | ||
– | Transposon Ty3-G Gag-Pol polyprotein; TAIR: AT5G16650.2 Chaperone DnaJ-domain superfamily protein; Swiss-Prot: sp|P97260|SCAP_CRIGR Sterol regulatory element-binding protein cleavage-activating protein; TrEMBL-Plants: tr|A0A151QMT5|A0A151QMT5_CAJCA Uncharacterized protein; Found in the gene: LotjaGi3g1v0264200 | 4 | ||
– | Transposable element protein, putative, Retrotrans_gag; TAIR: AT1G52730.1 Transducin/WD40 repeat-like superfamily protein; Swiss-Prot: sp|A3DBQ1|TPIS_CLOTH Triosephosphate isomerase; TrEMBL-Plants: tr|A0A151R0D0|A0A151R0D0_CAJCA Copia protein; Found in the gene: LotjaGi3g1v0306000 | 4 | ||
– | Transposable element protein, putative, Retrotrans_gag; TAIR: AT1G52730.1 Transducin/WD40 repeat-like superfamily protein; Swiss-Prot: sp|A3DBQ1|TPIS_CLOTH Triosephosphate isomerase; TrEMBL-Plants: tr|A0A151R0D0|A0A151R0D0_CAJCA Copia protein; Found in the gene: LotjaGi3g1v0306000 | 4 | ||
– | Transposable element protein, putative, Retrotrans_gag; TAIR: AT1G52730.1 Transducin/WD40 repeat-like superfamily protein; Swiss-Prot: sp|A3DBQ1|TPIS_CLOTH Triosephosphate isomerase; TrEMBL-Plants: tr|A0A151R0D0|A0A151R0D0_CAJCA Copia protein; Found in the gene: LotjaGi3g1v0306000 | 4 | ||
– | Transposon Ty3-I Gag-Pol polyprotein; TAIR: AT2G06105.1 aspartyl protease gag-polyprotein; Swiss-Prot: sp|B5YIF8|DNLJ_THEYD DNA ligase; TrEMBL-Plants: tr|A0A0S3QWS7|A0A0S3QWS7_PHAAN Uncharacterized protein; Found in the gene: LotjaGi4g1v0178200_LC | 7 | ||
– | Transposon Ty3-I Gag-Pol polyprotein; TAIR: AT2G06105.1 aspartyl protease gag-polyprotein; Swiss-Prot: sp|Q751J3|ATM_ASHGO Serine/threonine-protein kinase TEL1; TrEMBL-Plants: tr|A0A151R7X5|A0A151R7X5_CAJCA Transposon Ty3-I Gag-Pol polyprotein; Found in the gene: LotjaGi4g1v0186600 | 6 | ||
– | Transposon Ty3-I Gag-Pol polyprotein; TAIR: AT2G06105.1 aspartyl protease gag-polyprotein; Swiss-Prot: sp|Q4WGS4|DDI1_ASPFU DNA damage-inducible protein 1; TrEMBL-Plants: tr|A0A151TWR6|A0A151TWR6_CAJCA Uncharacterized protein; Found in the gene: LotjaGi4g1v0205100 | 10 | ||
– | Transposable element protein, putative, Retrotrans_gag; TAIR: ATCG00480.1 ATP synthase subunit beta (ChrC); Swiss-Prot: sp|O94613|NDOR1_SCHPO NADPH-dependent diflavin oxidoreductase 1; TrEMBL-Plants: tr|A0A151QNH2|A0A151QNH2_CAJCA Uncharacterized protein; Found in the gene: LotjaGi4g1v0214600 | 5 | ||
– | DNA-directed RNA polymerase subunit beta''; TAIR: ATCG00170.1 DNA-directed RNA polymerase family protein (ChrC); Swiss-Prot: sp|P48120|RPOC2_CYAPA DNA-directed RNA polymerase subunit beta''; TrEMBL-Plants: tr|A0A151QQY4|A0A151QQY4_CAJCA Uncharacterized protein; Found in the gene: LotjaGi4g1v0215500 | 5 | ||
– | Transposable element protein, putative, Retrotrans_gag; TAIR: AT4G23600.3 Tyrosine transaminase family protein; Swiss-Prot: sp|Q89DR1|GREA_BRADU Transcription elongation factor GreA; TrEMBL-Plants: tr|A0A151S4N2|A0A151S4N2_CAJCA Uncharacterized protein; Found in the gene: LotjaGi4g1v0218200_LC | 4 | ||
– | Retrovirus-related Pol polyprotein from transposon 297; TAIR: AT3G55650.1 Pyruvate kinase family protein; Swiss-Prot: sp|Q3J6U0|DEF_NITOC Peptide deformylase; TrEMBL-Plants: tr|A0A151U9B6|A0A151U9B6_CAJCA Uncharacterized protein; Found in the gene: LotjaGi5g1v0110600_LC | 5 | ||
– | Transposon Ty3-I Gag-Pol polyprotein; TAIR: AT1G13630.3 Tetratricopeptide repeat (TPR)-like superfamily protein; Swiss-Prot: sp|Q8C6S9|CFA54_MOUSE Cilia- and flagella-associated protein 54; TrEMBL-Plants: tr|A0A1D6DKT5|A0A1D6DKT5_WHEAT Uncharacterized protein; Found in the gene: LotjaGi5g1v0124200_LC | 6 | ||
– | Transposon Ty3-G Gag-Pol polyprotein; TAIR: AT2G06105.1 aspartyl protease gag-polyprotein; Swiss-Prot: sp|Q0VCK0|PUR9_BOVIN Bifunctional purine biosynthesis protein PURH; TrEMBL-Plants: tr|I7AYD2|I7AYD2_PHAVU Retropepsin-like protein; Found in the gene: LotjaGi5g1v0334400_LC | 9 | ||
– | DNA-directed RNA polymerase subunit beta''; TAIR: AT2G06105.1 aspartyl protease gag-polyprotein; Swiss-Prot: sp|Q06FX1|RPOC2_PELHO DNA-directed RNA polymerase subunit beta''; TrEMBL-Plants: tr|I7AYD2|I7AYD2_PHAVU Retropepsin-like protein; Found in the gene: LotjaGi6g1v0016800 | 8 | ||
– | DNA-directed RNA polymerase subunit beta''; TAIR: AT2G06105.1 aspartyl protease gag-polyprotein; Swiss-Prot: sp|Q06FX1|RPOC2_PELHO DNA-directed RNA polymerase subunit beta''; TrEMBL-Plants: tr|I7AYD2|I7AYD2_PHAVU Retropepsin-like protein; Found in the gene: LotjaGi6g1v0016800 | 8 |
A list of co-occurring predicted domains within the L. japonicus gene space:
Predicted domain | Source | Observations | Saturation (%) |
---|---|---|---|
mobidb-lite | MobiDBLite | 1 | 3.13 |