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retropepsin_like
Transcript | Name | Description | Predicted domains | Domain count |
---|---|---|---|---|
– | Cellular nucleic acid-binding protein [Medicago truncatula] gi|357459751|ref|XP_003600156.1| | 15 | ||
– | Retropepsin-like protein [Phaseolus vulgaris] gi|396582334|gb|AFN88198.1| | 4 | ||
– | Polyprotein [Glycine max] gi|27764548|gb|AAO23078.1| | 5 | ||
– | Gag-pro-like protein [Theobroma cacao] gi|508716038|gb|EOY07935.1| | 10 | ||
– | Polyprotein [Glycine max] gi|27764548|gb|AAO23078.1| | 4 | ||
– | RNA-directed DNA polymerase (Reverse transcriptase); Chromo; Zinc finger, CCHC-type; Peptidase aspartic, active site; Polynucleotidyl transferase, Ribonuclease H fold [Medicago truncatula] gi|124359710|gb|ABN06064.1| | 3 | ||
– | Retropepsin-like protein [Phaseolus vulgaris] gi|396582334|gb|AFN88198.1| | 4 | ||
– | Polyprotein [Glycine max] gi|27764548|gb|AAO23078.1| | 6 | ||
– | Gag-pro-like protein [Theobroma cacao] gi|508716038|gb|EOY07935.1| | 6 | ||
– | 11 | |||
– | Polyprotein [Glycine max] gi|27764548|gb|AAO23078.1| | 6 | ||
– | Polyprotein [Glycine max] gi|27764548|gb|AAO23078.1| | 10 | ||
– | Retropepsin-like protein [Phaseolus vulgaris] gi|396582334|gb|AFN88198.1| | 4 | ||
– | Polyprotein [Glycine max] gi|27764548|gb|AAO23078.1| | 10 | ||
– | Gag-pro-like protein [Theobroma cacao] gi|508716038|gb|EOY07935.1| | 7 | ||
– | Gag-pro-like protein [Theobroma cacao] gi|508775680|gb|EOY22936.1| | 5 | ||
– | Mutant gag-pol polyprotein [Pisum sativum] gi|310753569|gb|ADP20181.1| | 2 | ||
– | Mutant gag-pol polyprotein [Pisum sativum] gi|310753569|gb|ADP20181.1| | 4 | ||
– | Retrotransposon protein, putative, Ty3-gypsy subclass; TAIR: ATMG00860.1 DNA/RNA polymerases superfamily protein (ChrM); Swiss-Prot: sp|Q99315|YG31B_YEAST Transposon Ty3-G Gag-Pol polyprotein; TrEMBL-Plants: tr|B5U9W0|B5U9W0_LOTJA Putative uncharacterized protein; Found in the gene: LotjaGi1g1v0048500_LC | 39 | ||
– | Retrotransposon protein, putative, Ty3-gypsy subclass; TAIR: ATMG00860.1 DNA/RNA polymerases superfamily protein (ChrM); Swiss-Prot: sp|Q99315|YG31B_YEAST Transposon Ty3-G Gag-Pol polyprotein; TrEMBL-Plants: tr|B5U9W0|B5U9W0_LOTJA Putative uncharacterized protein; Found in the gene: LotjaGi1g1v0048500_LC | 39 | ||
– | Retrotransposon protein, putative, Ty3-gypsy subclass; TAIR: ATMG00850.1 DNA/RNA polymerases superfamily protein (ChrM); Swiss-Prot: sp|Q99315|YG31B_YEAST Transposon Ty3-G Gag-Pol polyprotein; TrEMBL-Plants: tr|A0A061F1K1|A0A061F1K1_THECC Retrotransposon-like protein; Found in the gene: LotjaGi1g1v0089900_LC | 11 | ||
– | Retrotransposon protein, putative, Ty3-gypsy subclass; TAIR: AT5G44670.1 glycosyltransferase family protein (DUF23); Swiss-Prot: sp|Q53RT3|APRV1_HUMAN Retroviral-like aspartic protease 1; TrEMBL-Plants: tr|A0A151RYL7|A0A151RYL7_CAJCA Transposon Ty3-G Gag-Pol polyprotein; Found in the gene: LotjaGi1g1v0107700_LC | 5 | ||
– | Gag-pol polyprotein; TAIR: AT3G29750.1 Eukaryotic aspartyl protease family protein; Swiss-Prot: sp|P20825|POL2_DROME Retrovirus-related Pol polyprotein from transposon 297; TrEMBL-Plants: tr|A0A151RBM5|A0A151RBM5_CAJCA Retrovirus-related Pol polyprotein from transposon 297 family; Found in the gene: LotjaGi1g1v0136100_LC | 16 | ||
– | Retrotransposon protein, putative, Ty3-gypsy subclass; TAIR: ATMG00860.1 DNA/RNA polymerases superfamily protein (ChrM); Swiss-Prot: sp|Q7LHG5|YI31B_YEAST Transposon Ty3-I Gag-Pol polyprotein; TrEMBL-Plants: tr|A0A151QNT0|A0A151QNT0_CAJCA Transposon Ty3-I Gag-Pol polyprotein; Found in the gene: LotjaGi1g1v0153800_LC | 30 | ||
– | Transposon Ty3-I Gag-Pol polyprotein; TAIR: AT2G06105.1 aspartyl protease gag-polyprotein; Swiss-Prot: sp|Q754R2|DDI1_ASHGO DNA damage-inducible protein 1; TrEMBL-Plants: tr|A0A1B5Z879|A0A1B5Z879_TRISU Uncharacterized protein; Found in the gene: LotjaGi1g1v0173400 | 10 | ||
– | Transposon Ty3-I Gag-Pol polyprotein; TAIR: AT2G06105.1 aspartyl protease gag-polyprotein; Swiss-Prot: sp|Q754R2|DDI1_ASHGO DNA damage-inducible protein 1; TrEMBL-Plants: tr|A0A1B5Z879|A0A1B5Z879_TRISU Uncharacterized protein; Found in the gene: LotjaGi1g1v0173400 | 10 | ||
– | Transposon Ty3-G Gag-Pol polyprotein; TAIR: AT3G29750.1 Eukaryotic aspartyl protease family protein; Swiss-Prot: sp|Q7LHG5|YI31B_YEAST Transposon Ty3-I Gag-Pol polyprotein; TrEMBL-Plants: tr|A0A0L9V4B0|A0A0L9V4B0_PHAAN Uncharacterized protein; Found in the gene: LotjaGi1g1v0196000 | 13 | ||
– | Gag-Pol polyprotein; TAIR: AT1G75560.1 zinc knuckle (CCHC-type) family protein; Swiss-Prot: sp|Q65XV7|RFA1C_ORYSJ Replication protein A 70 kDa DNA-binding subunit C; TrEMBL-Plants: tr|Q949L4|Q949L4_CICAR Putative polyprotein; Found in the gene: LotjaGi1g1v0226700_LC | 15 | ||
– | Retrotransposon protein, putative, Ty3-gypsy subclass; TAIR: ATMG00860.1 DNA/RNA polymerases superfamily protein (ChrM); Swiss-Prot: sp|Q99315|YG31B_YEAST Transposon Ty3-G Gag-Pol polyprotein; TrEMBL-Plants: tr|A0A1B5Z8G7|A0A1B5Z8G7_TRISU Uncharacterized protein; Found in the gene: LotjaGi1g1v0229300_LC | 30 | ||
– | Retrotransposon protein, putative, Ty3-gypsy subclass; TAIR: ATMG00860.1 DNA/RNA polymerases superfamily protein (ChrM); Swiss-Prot: sp|Q7LHG5|YI31B_YEAST Transposon Ty3-I Gag-Pol polyprotein; TrEMBL-Plants: tr|A0A1B5Z8G7|A0A1B5Z8G7_TRISU Uncharacterized protein; Found in the gene: LotjaGi1g1v0281700_LC | 45 | ||
– | Retrovirus-related Pol polyprotein from transposon opus; TAIR: AT3G14370.1 Protein kinase superfamily protein; Swiss-Prot: sp|Q6FQE9|DDI1_CANGA DNA damage-inducible protein 1; TrEMBL-Plants: tr|A0A0S3QWS7|A0A0S3QWS7_PHAAN Uncharacterized protein; Found in the gene: LotjaGi1g1v0289800_LC | 6 | ||
– | Retrotransposon protein, putative, Ty3-gypsy subclass; TAIR: ATMG00860.1 DNA/RNA polymerases superfamily protein (ChrM); Swiss-Prot: sp|Q99315|YG31B_YEAST Transposon Ty3-G Gag-Pol polyprotein; TrEMBL-Plants: tr|A2Q2C7|A2Q2C7_MEDTR RNA-directed DNA polymerase (Reverse transcriptase); Chromo; Zinc finger, CCHC-type; Peptidase aspartic, active site; Polynucleotidyl transferase, Ribonuclease H fold; Found in the gene: LotjaGi1g1v0311100_LC | 42 | ||
– | Transposon Ty3-I Gag-Pol polyprotein; TAIR: AT2G06105.1 aspartyl protease gag-polyprotein; Swiss-Prot: sp|Q4WGS4|DDI1_ASPFU DNA damage-inducible protein 1; TrEMBL-Plants: tr|A0A151R7N2|A0A151R7N2_CAJCA Uncharacterized protein; Found in the gene: LotjaGi1g1v0337000 | 11 | ||
– | Transposon Ty3-I Gag-Pol polyprotein; TAIR: AT2G06105.1 aspartyl protease gag-polyprotein; Swiss-Prot: sp|Q4WGS4|DDI1_ASPFU DNA damage-inducible protein 1; TrEMBL-Plants: tr|A0A151R7N2|A0A151R7N2_CAJCA Uncharacterized protein; Found in the gene: LotjaGi1g1v0337000 | 11 | ||
– | Transposon Ty3-G Gag-Pol polyprotein; TAIR: AT3G29750.1 Eukaryotic aspartyl protease family protein; Swiss-Prot: sp|Q7LHG5|YI31B_YEAST Transposon Ty3-I Gag-Pol polyprotein; TrEMBL-Plants: tr|A0A0L9V4B0|A0A0L9V4B0_PHAAN Uncharacterized protein; Found in the gene: LotjaGi1g1v0361200_LC | 12 | ||
– | Retrotransposon protein, putative, Ty3-gypsy subclass; TAIR: ATMG00860.1 DNA/RNA polymerases superfamily protein (ChrM); Swiss-Prot: sp|Q99315|YG31B_YEAST Transposon Ty3-G Gag-Pol polyprotein; TrEMBL-Plants: tr|Q2HW87|Q2HW87_MEDTR RNA-directed DNA polymerase (Reverse transcriptase); Zinc finger, CCHC-type; Peptidase aspartic, active site; Retrotransposon gag protein; Found in the gene: LotjaGi1g1v0388900_LC | 16 | ||
– | Retrotransposon protein, putative, Ty3-gypsy subclass; TAIR: AT3G44713.1 hypothetical protein; Swiss-Prot: sp|Q9PT98|PY_DICLA Peptide Y; TrEMBL-Plants: tr|A0A151S659|A0A151S659_CAJCA Uncharacterized protein; Found in the gene: LotjaGi1g1v0391900_LC | 6 | ||
– | Pol polyprotein; TAIR: AT5G24750.1 UDP-Glycosyltransferase superfamily protein; Swiss-Prot: sp|Q9UR07|TF211_SCHPO Transposon Tf2-11 polyprotein; TrEMBL-Plants: tr|A0A151RYL7|A0A151RYL7_CAJCA Transposon Ty3-G Gag-Pol polyprotein; Found in the gene: LotjaGi1g1v0537700_LC | 9 | ||
– | Retrotransposon protein, putative, Ty3-gypsy subclass; TAIR: AT5G45170.2 Haloacid dehalogenase-like hydrolase (HAD) superfamily protein; Swiss-Prot: sp|Q9EPE9|AT131_MOUSE Manganese-transporting ATPase 13A1; TrEMBL-Plants: tr|A0A151U0E6|A0A151U0E6_CAJCA Uncharacterized protein; Found in the gene: LotjaGi1g1v0548600_LC | 4 | ||
– | Retrotransposon protein, putative, Ty3-gypsy subclass; TAIR: ATMG00860.1 DNA/RNA polymerases superfamily protein (ChrM); Swiss-Prot: sp|Q99315|YG31B_YEAST Transposon Ty3-G Gag-Pol polyprotein; TrEMBL-Plants: tr|A2Q2C7|A2Q2C7_MEDTR RNA-directed DNA polymerase (Reverse transcriptase); Chromo; Zinc finger, CCHC-type; Peptidase aspartic, active site; Polynucleotidyl transferase, Ribonuclease H fold; Found in the gene: LotjaGi1g1v0622800_LC | 37 | ||
– | Retrotransposon protein, putative, Ty3-gypsy subclass; TAIR: AT1G50620.1 RING/FYVE/PHD zinc finger superfamily protein; Swiss-Prot: sp|Q9HLB9|DCUP_THEAC Uroporphyrinogen decarboxylase; TrEMBL-Plants: tr|A0A151U0E6|A0A151U0E6_CAJCA Uncharacterized protein; Found in the gene: LotjaGi2g1v0002300_LC | 6 | ||
– | Gag-Pol polyprotein; TAIR: AT4G36020.1 cold shock domain protein 1; Swiss-Prot: sp|P53849|GIS2_YEAST Zinc finger protein GIS2; TrEMBL-Plants: tr|Q2HW87|Q2HW87_MEDTR RNA-directed DNA polymerase (Reverse transcriptase); Zinc finger, CCHC-type; Peptidase aspartic, active site; Retrotransposon gag protein; Found in the gene: LotjaGi2g1v0013600_LC | 21 | ||
– | Retrovirus-related Pol polyprotein from transposon opus; TAIR: AT2G06105.1 aspartyl protease gag-polyprotein; Swiss-Prot: sp|Q4WGS4|DDI1_ASPFU DNA damage-inducible protein 1; TrEMBL-Plants: tr|A0A0S3QWS7|A0A0S3QWS7_PHAAN Uncharacterized protein; Found in the gene: LotjaGi2g1v0014500_LC | 7 | ||
– | Pol polyprotein; TAIR: ATMG00860.1 DNA/RNA polymerases superfamily protein (ChrM); Swiss-Prot: sp|P20825|POL2_DROME Retrovirus-related Pol polyprotein from transposon 297; TrEMBL-Plants: tr|A0A0L9V4Z2|A0A0L9V4Z2_PHAAN Uncharacterized protein; Found in the gene: LotjaGi2g1v0016800_LC | 24 | ||
– | Pol polyprotein; TAIR: ATMG00860.1 DNA/RNA polymerases superfamily protein (ChrM); Swiss-Prot: sp|P20825|POL2_DROME Retrovirus-related Pol polyprotein from transposon 297; TrEMBL-Plants: tr|A0A0L9V4Z2|A0A0L9V4Z2_PHAAN Uncharacterized protein; Found in the gene: LotjaGi2g1v0016800_LC | 24 | ||
– | Transposon Ty3-I Gag-Pol polyprotein; TAIR: AT3G29750.1 Eukaryotic aspartyl protease family protein; Swiss-Prot: sp|Q8I7P9|POL5_DROME Retrovirus-related Pol polyprotein from transposon opus; TrEMBL-Plants: tr|A2Q2C7|A2Q2C7_MEDTR RNA-directed DNA polymerase (Reverse transcriptase); Chromo; Zinc finger, CCHC-type; Peptidase aspartic, active site; Polynucleotidyl transferase, Ribonuclease H fold; Found in the gene: LotjaGi2g1v0020300_LC | 16 | ||
– | Retrovirus-related Pol polyprotein from transposon opus; TAIR: AT2G06105.1 aspartyl protease gag-polyprotein; Swiss-Prot: sp|A1DCU5|DDI1_NEOFI DNA damage-inducible protein 1; TrEMBL-Plants: tr|A0A0S3QWS7|A0A0S3QWS7_PHAAN Uncharacterized protein; Found in the gene: LotjaGi2g1v0062500_LC | 7 | ||
– | Gag-Pol polyprotein; TAIR: AT3G43590.1 zinc knuckle (CCHC-type) family protein; Swiss-Prot: sp|P05895|POL_SIVVT Gag-Pol polyprotein; TrEMBL-Plants: tr|Q949L3|Q949L3_CICAR Putative polyprotein; Found in the gene: LotjaGi2g1v0090500_LC | 12 | ||
– | Retrotransposon protein, putative, Ty3-gypsy subclass; TAIR: AT1G55540.1 Nuclear pore complex protein; Swiss-Prot: sp|A7KAI1|ATG2_PICAN Autophagy-related protein 2; TrEMBL-Plants: tr|A0A151U0E6|A0A151U0E6_CAJCA Uncharacterized protein; Found in the gene: LotjaGi2g1v0097100_LC | 5 | ||
– | Retrotransposon protein, putative, Ty3-gypsy subclass; TAIR: ATMG00860.1 DNA/RNA polymerases superfamily protein (ChrM); Swiss-Prot: sp|Q99315|YG31B_YEAST Transposon Ty3-G Gag-Pol polyprotein; TrEMBL-Plants: tr|Q2HW87|Q2HW87_MEDTR RNA-directed DNA polymerase (Reverse transcriptase); Zinc finger, CCHC-type; Peptidase aspartic, active site; Retrotransposon gag protein; Found in the gene: LotjaGi2g1v0106400_LC | 32 | ||
– | Gag-Pol polyprotein; TAIR: AT4G36020.2 cold shock domain protein 1; Swiss-Prot: sp|P05895|POL_SIVVT Gag-Pol polyprotein; TrEMBL-Plants: tr|Q949L4|Q949L4_CICAR Putative polyprotein; Found in the gene: LotjaGi2g1v0110300_LC | 13 | ||
– | Retrotransposon protein, putative, Ty3-gypsy subclass; TAIR: ATMG00860.1 DNA/RNA polymerases superfamily protein (ChrM); Swiss-Prot: sp|Q99315|YG31B_YEAST Transposon Ty3-G Gag-Pol polyprotein; TrEMBL-Plants: tr|A0A0L9V4A1|A0A0L9V4A1_PHAAN Uncharacterized protein; Found in the gene: LotjaGi2g1v0113200_LC | 37 | ||
– | Transposon Ty3-I Gag-Pol polyprotein; TAIR: AT4G13320.1 hypothetical protein; Swiss-Prot: sp|Q8RCZ0|ADDA_CALS4 ATP-dependent helicase/nuclease subunit A; TrEMBL-Plants: tr|A0A151T1K8|A0A151T1K8_CAJCA Transposon Ty3-I Gag-Pol polyprotein; Found in the gene: LotjaGi2g1v0113700_LC | 5 | ||
– | Retrotransposon protein, putative, Ty3-gypsy subclass; TAIR: ATMG00860.1 DNA/RNA polymerases superfamily protein (ChrM); Swiss-Prot: sp|Q7LHG5|YI31B_YEAST Transposon Ty3-I Gag-Pol polyprotein; TrEMBL-Plants: tr|A0A151S2S3|A0A151S2S3_CAJCA Transposon Ty3-I Gag-Pol polyprotein; Found in the gene: LotjaGi2g1v0116300_LC | 43 | ||
– | Retrotransposon protein, putative, Ty3-gypsy subclass; TAIR: AT1G75790.1 SKU5 similar 18; Swiss-Prot: sp|Q9BQI9|NRIP2_HUMAN Nuclear receptor-interacting protein 2; TrEMBL-Plants: tr|A0A151TJB2|A0A151TJB2_CAJCA Transposon Ty3-I Gag-Pol polyprotein; Found in the gene: LotjaGi2g1v0401700_LC | 5 | ||
– | Retrotransposon protein, putative, unclassified; TAIR: AT3G51990.1 Protein kinase superfamily protein; Swiss-Prot: sp|Q6DAR6|CAPP_PECAS Phosphoenolpyruvate carboxylase; TrEMBL-Plants: tr|A0A151RTH9|A0A151RTH9_CAJCA Uncharacterized protein K02A2.6; Found in the gene: LotjaGi3g1v0097300_LC | 5 | ||
– | Transposon Ty3-G Gag-Pol polyprotein; TAIR: AT3G29750.1 Eukaryotic aspartyl protease family protein; Swiss-Prot: sp|P05400|POL_CERV Enzymatic polyprotein; TrEMBL-Plants: tr|Q84ZV5|Q84ZV5_SOYBN Polyprotein; Found in the gene: LotjaGi3g1v0128000_LC | 8 | ||
– | Transposon Ty3-G Gag-Pol polyprotein; TAIR: AT3G42723.1 ATP binding / aminoacyl-tRNA ligase/ nucleotide binding protein; Swiss-Prot: sp|Q7TN75|PEG10_MOUSE Retrotransposon-derived protein PEG10; TrEMBL-Plants: tr|A0A151RSW7|A0A151RSW7_CAJCA Transposon Ty3-G Gag-Pol polyprotein; Found in the gene: LotjaGi3g1v0134300 | 7 | ||
– | Transposon Ty3-G Gag-Pol polyprotein; TAIR: AT3G29750.1 Eukaryotic aspartyl protease family protein; Swiss-Prot: sp|Q53RT3|APRV1_HUMAN Retroviral-like aspartic protease 1; TrEMBL-Plants: tr|B5U9V8|B5U9V8_LOTJA Putative uncharacterized protein; Found in the gene: LotjaGi3g1v0148900 | 11 | ||
– | Retrotransposon protein, putative, Ty3-gypsy subclass; TAIR: ATMG00860.1 DNA/RNA polymerases superfamily protein (ChrM); Swiss-Prot: sp|Q99315|YG31B_YEAST Transposon Ty3-G Gag-Pol polyprotein; TrEMBL-Plants: tr|B5U9V8|B5U9V8_LOTJA Putative uncharacterized protein; Found in the gene: LotjaGi3g1v0167800_LC | 39 | ||
– | Pol polyprotein; TAIR: ATMG00860.1 DNA/RNA polymerases superfamily protein (ChrM); Swiss-Prot: sp|Q99315|YG31B_YEAST Transposon Ty3-G Gag-Pol polyprotein; TrEMBL-Plants: tr|A0A0L9TXH6|A0A0L9TXH6_PHAAN Uncharacterized protein; Found in the gene: LotjaGi3g1v0264300_LC | 30 | ||
– | Retrotransposon protein, putative, unclassified; TAIR: AT3G49142.1 Tetratricopeptide repeat (TPR)-like superfamily protein; Swiss-Prot: sp|P04323|POL3_DROME Retrovirus-related Pol polyprotein from transposon 17.6; TrEMBL-Plants: tr|A0A151TV51|A0A151TV51_CAJCA Uncharacterized protein; Found in the gene: LotjaGi3g1v0269700 | 8 | ||
– | Pol polyprotein; TAIR: ATMG00860.1 DNA/RNA polymerases superfamily protein (ChrM); Swiss-Prot: sp|P04323|POL3_DROME Retrovirus-related Pol polyprotein from transposon 17.6; TrEMBL-Plants: tr|A0A151UCZ5|A0A151UCZ5_CAJCA Retrovirus-related Pol polyprotein from transposon 17.6; Found in the gene: LotjaGi3g1v0271400_LC | 20 | ||
– | Retrotransposon protein, putative, Ty3-gypsy subclass; TAIR: ATMG00860.1 DNA/RNA polymerases superfamily protein (ChrM); Swiss-Prot: sp|Q7LHG5|YI31B_YEAST Transposon Ty3-I Gag-Pol polyprotein; TrEMBL-Plants: tr|A0A151S2S3|A0A151S2S3_CAJCA Transposon Ty3-I Gag-Pol polyprotein; Found in the gene: LotjaGi3g1v0306700_LC | 32 | ||
– | Retrotransposon protein, putative, Ty3-gypsy subclass; TAIR: ATMG00860.1 DNA/RNA polymerases superfamily protein (ChrM); Swiss-Prot: sp|Q99315|YG31B_YEAST Transposon Ty3-G Gag-Pol polyprotein; TrEMBL-Plants: tr|A0A151S2S3|A0A151S2S3_CAJCA Transposon Ty3-I Gag-Pol polyprotein; Found in the gene: LotjaGi3g1v0307200_LC | 43 | ||
– | Retrotransposon protein, putative, Ty3-gypsy subclass; TAIR: ATMG00860.1 DNA/RNA polymerases superfamily protein (ChrM); Swiss-Prot: sp|Q99315|YG31B_YEAST Transposon Ty3-G Gag-Pol polyprotein; TrEMBL-Plants: tr|A0A151S2S3|A0A151S2S3_CAJCA Transposon Ty3-I Gag-Pol polyprotein; Found in the gene: LotjaGi3g1v0307200_LC | 43 | ||
– | Retrotransposon protein, putative, Ty3-gypsy subclass; TAIR: ATMG00860.1 DNA/RNA polymerases superfamily protein (ChrM); Swiss-Prot: sp|Q99315|YG31B_YEAST Transposon Ty3-G Gag-Pol polyprotein; TrEMBL-Plants: tr|A0A151S2S3|A0A151S2S3_CAJCA Transposon Ty3-I Gag-Pol polyprotein; Found in the gene: LotjaGi3g1v0307200_LC | 43 | ||
– | Polyprotein; TAIR: AT3G01630.1 Major facilitator superfamily protein; Swiss-Prot: sp|A8X9H4|CPG4_CAEBR Chondroitin proteoglycan 4; TrEMBL-Plants: tr|A0A0R0JZ47|A0A0R0JZ47_SOYBN Uncharacterized protein; Found in the gene: LotjaGi3g1v0326600_LC | 11 | ||
– | Retrotransposon protein, putative, Ty3-gypsy subclass; TAIR: ATMG00860.1 DNA/RNA polymerases superfamily protein (ChrM); Swiss-Prot: sp|Q99315|YG31B_YEAST Transposon Ty3-G Gag-Pol polyprotein; TrEMBL-Plants: tr|B5U9V8|B5U9V8_LOTJA Putative uncharacterized protein; Found in the gene: LotjaGi3g1v0423100_LC | 37 | ||
– | Retrotransposon protein, putative, Ty3-gypsy subclass; TAIR: ATMG00860.1 DNA/RNA polymerases superfamily protein (ChrM); Swiss-Prot: sp|Q99315|YG31B_YEAST Transposon Ty3-G Gag-Pol polyprotein; TrEMBL-Plants: tr|B5U9V8|B5U9V8_LOTJA Putative uncharacterized protein; Found in the gene: LotjaGi3g1v0423100_LC | 37 | ||
– | Retrotransposon protein, putative, Ty3-gypsy subclass; TAIR: AT3G13235.1 ubiquitin family protein; Swiss-Prot: sp|Q9NRU3|CNNM1_HUMAN Metal transporter CNNM1; TrEMBL-Plants: tr|Q69F85|Q69F85_PHAVU Gag-pol polyprotein; Found in the gene: LotjaGi3g1v0450200_LC | 6 | ||
– | Transposon Ty3-G Gag-Pol polyprotein; TAIR: AT3G29750.1 Eukaryotic aspartyl protease family protein; Swiss-Prot: sp|Q7LHG5|YI31B_YEAST Transposon Ty3-I Gag-Pol polyprotein; TrEMBL-Plants: tr|A0A0L9V4B0|A0A0L9V4B0_PHAAN Uncharacterized protein; Found in the gene: LotjaGi3g1v0472900_LC | 6 | ||
– | Gag-pro; TAIR: AT3G57910.1 D111/G-patch domain-containing protein; Swiss-Prot: sp|Q6GQ76|CMTR1_XENLA Cap-specific mRNA (nucleoside-2'-O-)-methyltransferase 1; TrEMBL-Plants: tr|A0A061EXR3|A0A061EXR3_THECC Uncharacterized protein; Found in the gene: LotjaGi3g1v0547500 | 11 | ||
– | Transposon Ty3-G Gag-Pol polyprotein; TAIR: AT5G24350.1 neuroblastoma-amplified sequence protein; Swiss-Prot: sp|Q99315|YG31B_YEAST Transposon Ty3-G Gag-Pol polyprotein; TrEMBL-Plants: tr|A0A151RYL7|A0A151RYL7_CAJCA Transposon Ty3-G Gag-Pol polyprotein; Found in the gene: LotjaGi4g1v0080100_LC | 10 | ||
– | Gag-Pol polyprotein; TAIR: AT3G29750.1 Eukaryotic aspartyl protease family protein; Swiss-Prot: sp|Q99315|YG31B_YEAST Transposon Ty3-G Gag-Pol polyprotein; TrEMBL-Plants: tr|A2Q2C7|A2Q2C7_MEDTR RNA-directed DNA polymerase (Reverse transcriptase); Chromo; Zinc finger, CCHC-type; Peptidase aspartic, active site; Polynucleotidyl transferase, Ribonuclease H fold; Found in the gene: LotjaGi4g1v0125300_LC | 21 | ||
– | Retrotransposon protein, putative, Ty3-gypsy subclass; TAIR: ATMG00860.1 DNA/RNA polymerases superfamily protein (ChrM); Swiss-Prot: sp|P0CT41|TF212_SCHPO Transposon Tf2-12 polyprotein; TrEMBL-Plants: tr|A0A151RZR6|A0A151RZR6_CAJCA Transposon Ty3-G Gag-Pol polyprotein; Found in the gene: LotjaGi4g1v0159700_LC | 30 | ||
– | Retrotransposon protein, putative, Ty3-gypsy subclass; TAIR: ATMG00860.1 DNA/RNA polymerases superfamily protein (ChrM); Swiss-Prot: sp|Q7LHG5|YI31B_YEAST Transposon Ty3-I Gag-Pol polyprotein; TrEMBL-Plants: tr|A0A151QNT0|A0A151QNT0_CAJCA Transposon Ty3-I Gag-Pol polyprotein; Found in the gene: LotjaGi4g1v0171300_LC | 30 | ||
– | Transposon Ty3-I Gag-Pol polyprotein; TAIR: AT2G06105.1 aspartyl protease gag-polyprotein; Swiss-Prot: sp|B5YIF8|DNLJ_THEYD DNA ligase; TrEMBL-Plants: tr|A0A0S3QWS7|A0A0S3QWS7_PHAAN Uncharacterized protein; Found in the gene: LotjaGi4g1v0178200_LC | 7 | ||
– | Retrotransposon protein, putative, unclassified; TAIR: AT2G06105.1 aspartyl protease gag-polyprotein; Swiss-Prot: sp|Q02254|NDK1_SPIOL Nucleoside diphosphate kinase 1; TrEMBL-Plants: tr|A0A072VIZ3|A0A072VIZ3_MEDTR Uncharacterized protein; Found in the gene: LotjaGi4g1v0187100_LC | 5 | ||
– | Transposon Ty3-I Gag-Pol polyprotein; TAIR: AT2G06105.1 aspartyl protease gag-polyprotein; Swiss-Prot: sp|Q4WGS4|DDI1_ASPFU DNA damage-inducible protein 1; TrEMBL-Plants: tr|A0A151TWR6|A0A151TWR6_CAJCA Uncharacterized protein; Found in the gene: LotjaGi4g1v0205100 | 10 | ||
– | Retrotransposon protein, putative, Ty3-gypsy subclass; TAIR: AT5G24275.1 En/Spm-like transposon; Swiss-Prot: sp|Q53RT3|APRV1_HUMAN Retroviral-like aspartic protease 1; TrEMBL-Plants: tr|A0A151RWR4|A0A151RWR4_CAJCA Uncharacterized protein; Found in the gene: LotjaGi4g1v0205600_LC | 6 | ||
– | Transposon Ty3-I Gag-Pol polyprotein; TAIR: AT4G13320.1 hypothetical protein; Swiss-Prot: sp|Q02836|POL_SIVG1 Gag-Pol polyprotein; TrEMBL-Plants: tr|A0A151R7Z9|A0A151R7Z9_CAJCA Retrovirus-related Pol polyprotein from transposon 17.6; Found in the gene: LotjaGi4g1v0207700_LC | 15 | ||
– | Retrotransposon protein, putative, Ty3-gypsy subclass; TAIR: ATMG00860.1 DNA/RNA polymerases superfamily protein (ChrM); Swiss-Prot: sp|Q99315|YG31B_YEAST Transposon Ty3-G Gag-Pol polyprotein; TrEMBL-Plants: tr|B5U9W0|B5U9W0_LOTJA Putative uncharacterized protein; Found in the gene: LotjaGi4g1v0213500_LC | 40 | ||
– | Transposon Ty3-I Gag-Pol polyprotein; TAIR: AT3G29750.1 Eukaryotic aspartyl protease family protein; Swiss-Prot: sp|Q7TN75|PEG10_MOUSE Retrotransposon-derived protein PEG10; TrEMBL-Plants: tr|A0A151T4G5|A0A151T4G5_CAJCA Transposon Ty3-I Gag-Pol polyprotein; Found in the gene: LotjaGi4g1v0259500 | 10 | ||
– | Transposon Ty3-I Gag-Pol polyprotein; TAIR: ATMG00850.1 DNA/RNA polymerases superfamily protein (ChrM); Swiss-Prot: sp|Q99315|YG31B_YEAST Transposon Ty3-G Gag-Pol polyprotein; TrEMBL-Plants: tr|Q3C0I2|Q3C0I2_LOTJA Putative uncharacterized protein; Found in the gene: LotjaGi4g1v0261200_LC | 16 | ||
– | Transposon Ty3-I Gag-Pol polyprotein; TAIR: AT3G29750.1 Eukaryotic aspartyl protease family protein; Swiss-Prot: sp|P04323|POL3_DROME Retrovirus-related Pol polyprotein from transposon 17.6; TrEMBL-Plants: tr|A2Q2C7|A2Q2C7_MEDTR RNA-directed DNA polymerase (Reverse transcriptase); Chromo; Zinc finger, CCHC-type; Peptidase aspartic, active site; Polynucleotidyl transferase, Ribonuclease H fold; Found in the gene: LotjaGi4g1v0292400_LC | 18 | ||
– | Transposon Ty3-G Gag-Pol polyprotein; TAIR: ATMG00860.1 DNA/RNA polymerases superfamily protein (ChrM); Swiss-Prot: sp|P20825|POL2_DROME Retrovirus-related Pol polyprotein from transposon 297; TrEMBL-Plants: tr|A2Q2C7|A2Q2C7_MEDTR RNA-directed DNA polymerase (Reverse transcriptase); Chromo; Zinc finger, CCHC-type; Peptidase aspartic, active site; Polynucleotidyl transferase, Ribonuclease H fold; Found in the gene: LotjaGi4g1v0368100_LC | 25 | ||
– | Retrovirus-related Pol polyprotein from transposon 297; TAIR: AT3G55650.1 Pyruvate kinase family protein; Swiss-Prot: sp|Q3J6U0|DEF_NITOC Peptide deformylase; TrEMBL-Plants: tr|A0A151U9B6|A0A151U9B6_CAJCA Uncharacterized protein; Found in the gene: LotjaGi5g1v0110600_LC | 5 | ||
– | Retrotransposon protein, putative, Ty3-gypsy subclass; TAIR: ATMG00860.1 DNA/RNA polymerases superfamily protein (ChrM); Swiss-Prot: sp|Q99315|YG31B_YEAST Transposon Ty3-G Gag-Pol polyprotein; TrEMBL-Plants: tr|B5U9W1|B5U9W1_LOTJA Putative uncharacterized protein; Found in the gene: LotjaGi5g1v0150900_LC | 41 | ||
– | Transposon Ty3-G Gag-Pol polyprotein; TAIR: AT2G06105.1 aspartyl protease gag-polyprotein; Swiss-Prot: sp|Q0VCK0|PUR9_BOVIN Bifunctional purine biosynthesis protein PURH; TrEMBL-Plants: tr|I7AYD2|I7AYD2_PHAVU Retropepsin-like protein; Found in the gene: LotjaGi5g1v0334400_LC | 9 | ||
– | Retrotransposon protein, putative, Ty3-gypsy subclass; TAIR: ATMG00860.1 DNA/RNA polymerases superfamily protein (ChrM); Swiss-Prot: sp|P0CT41|TF212_SCHPO Transposon Tf2-12 polyprotein; TrEMBL-Plants: tr|A2Q2C7|A2Q2C7_MEDTR RNA-directed DNA polymerase (Reverse transcriptase); Chromo; Zinc finger, CCHC-type; Peptidase aspartic, active site; Polynucleotidyl transferase, Ribonuclease H fold; Found in the gene: LotjaGi5g1v0343500_LC | 37 | ||
– | DNA-directed RNA polymerase subunit beta''; TAIR: AT2G06105.1 aspartyl protease gag-polyprotein; Swiss-Prot: sp|Q06FX1|RPOC2_PELHO DNA-directed RNA polymerase subunit beta''; TrEMBL-Plants: tr|I7AYD2|I7AYD2_PHAVU Retropepsin-like protein; Found in the gene: LotjaGi6g1v0016800 | 8 | ||
– | DNA-directed RNA polymerase subunit beta''; TAIR: AT2G06105.1 aspartyl protease gag-polyprotein; Swiss-Prot: sp|Q06FX1|RPOC2_PELHO DNA-directed RNA polymerase subunit beta''; TrEMBL-Plants: tr|I7AYD2|I7AYD2_PHAVU Retropepsin-like protein; Found in the gene: LotjaGi6g1v0016800 | 8 | ||
– | Transposon Ty3-G Gag-Pol polyprotein; TAIR: AT3G29750.1 Eukaryotic aspartyl protease family protein; Swiss-Prot: sp|Q99315|YG31B_YEAST Transposon Ty3-G Gag-Pol polyprotein; TrEMBL-Plants: tr|Q84ZV5|Q84ZV5_SOYBN Polyprotein; Found in the gene: LotjaGi6g1v0108800_LC | 8 | ||
– | Retrotransposon protein, putative, Ty3-gypsy subclass; TAIR: AT1G75560.1 zinc knuckle (CCHC-type) family protein; Swiss-Prot: sp|Q99315|YG31B_YEAST Transposon Ty3-G Gag-Pol polyprotein; TrEMBL-Plants: tr|A0A151RHT9|A0A151RHT9_CAJCA Retrotransposable element Tf2; Found in the gene: LotjaGi6g1v0125000_LC | 24 | ||
– | Retrotransposon protein, putative, unclassified; TAIR: AT3G53930.1 Protein kinase superfamily protein; Swiss-Prot: sp|P04323|POL3_DROME Retrovirus-related Pol polyprotein from transposon 17.6; TrEMBL-Plants: tr|A0A072TF32|A0A072TF32_MEDTR Uncharacterized protein; Found in the gene: LotjaGi6g1v0151200_LC | 4 | ||
– | Transposon Ty3-G Gag-Pol polyprotein; TAIR: AT1G75560.1 zinc knuckle (CCHC-type) family protein; Swiss-Prot: sp|P16900|GAG_OMVVS Gag polyprotein; TrEMBL-Plants: tr|A0A151RID1|A0A151RID1_CAJCA Transposon Ty3-G Gag-Pol polyprotein; Found in the gene: LotjaGi6g1v0182500_LC | 17 | ||
– | Retrotransposon protein, putative, Ty3-gypsy subclass; TAIR: ATMG00860.1 DNA/RNA polymerases superfamily protein (ChrM); Swiss-Prot: sp|P20825|POL2_DROME Retrovirus-related Pol polyprotein from transposon 297; TrEMBL-Plants: tr|A0A151TQZ3|A0A151TQZ3_CAJCA Transposon Ty3-G Gag-Pol polyprotein; Found in the gene: LotjaGi6g1v0214100_LC | 30 | ||
– | Retrotransposon protein, putative, Ty3-gypsy subclass; TAIR: ATMG00860.1 DNA/RNA polymerases superfamily protein (ChrM); Swiss-Prot: sp|Q99315|YG31B_YEAST Transposon Ty3-G Gag-Pol polyprotein; TrEMBL-Plants: tr|A0A151S2S3|A0A151S2S3_CAJCA Transposon Ty3-I Gag-Pol polyprotein; Found in the gene: LotjaGi6g1v0214100_LC | 44 | ||
– | Retrotransposon protein, putative, Ty3-gypsy subclass; TAIR: ATMG00860.1 DNA/RNA polymerases superfamily protein (ChrM); Swiss-Prot: sp|P20825|POL2_DROME Retrovirus-related Pol polyprotein from transposon 297; TrEMBL-Plants: tr|A0A151TQZ3|A0A151TQZ3_CAJCA Transposon Ty3-G Gag-Pol polyprotein; Found in the gene: LotjaGi6g1v0214100_LC | 30 | ||
– | Retrotransposon protein, putative, Ty3-gypsy subclass; TAIR: ATMG00860.1 DNA/RNA polymerases superfamily protein (ChrM); Swiss-Prot: sp|Q99315|YG31B_YEAST Transposon Ty3-G Gag-Pol polyprotein; TrEMBL-Plants: tr|A0A151S2S3|A0A151S2S3_CAJCA Transposon Ty3-I Gag-Pol polyprotein; Found in the gene: LotjaGi6g1v0214100_LC | 44 | ||
– | Retrotransposon protein, putative, Ty3-gypsy subclass; TAIR: ATMG00860.1 DNA/RNA polymerases superfamily protein (ChrM); Swiss-Prot: sp|Q99315|YG31B_YEAST Transposon Ty3-G Gag-Pol polyprotein; TrEMBL-Plants: tr|A0A151S2S3|A0A151S2S3_CAJCA Transposon Ty3-I Gag-Pol polyprotein; Found in the gene: LotjaGi6g1v0214100_LC | 44 | ||
– | Retrotransposon protein, putative, Ty3-gypsy subclass; TAIR: ATMG00860.1 DNA/RNA polymerases superfamily protein (ChrM); Swiss-Prot: sp|Q99315|YG31B_YEAST Transposon Ty3-G Gag-Pol polyprotein; TrEMBL-Plants: tr|A0A151S2S3|A0A151S2S3_CAJCA Transposon Ty3-I Gag-Pol polyprotein; Found in the gene: LotjaGi6g1v0214100_LC | 44 | ||
– | Retrotransposon protein, putative, Ty3-gypsy subclass; TAIR: ATMG00860.1 DNA/RNA polymerases superfamily protein (ChrM); Swiss-Prot: sp|Q99315|YG31B_YEAST Transposon Ty3-G Gag-Pol polyprotein; TrEMBL-Plants: tr|A0A151S2S3|A0A151S2S3_CAJCA Transposon Ty3-I Gag-Pol polyprotein; Found in the gene: LotjaGi6g1v0214100_LC | 44 | ||
– | Retrotransposon protein, putative, Ty3-gypsy subclass; TAIR: ATMG00860.1 DNA/RNA polymerases superfamily protein (ChrM); Swiss-Prot: sp|Q99315|YG31B_YEAST Transposon Ty3-G Gag-Pol polyprotein; TrEMBL-Plants: tr|A0A061FHZ8|A0A061FHZ8_THECC DNA/RNA polymerases superfamily protein; Found in the gene: LotjaGi6g1v0218100_LC | 42 | ||
– | Retrotransposon protein, putative, Ty3-gypsy subclass; TAIR: ATMG00860.1 DNA/RNA polymerases superfamily protein (ChrM); Swiss-Prot: sp|Q99315|YG31B_YEAST Transposon Ty3-G Gag-Pol polyprotein; TrEMBL-Plants: tr|A0A061FHZ8|A0A061FHZ8_THECC DNA/RNA polymerases superfamily protein; Found in the gene: LotjaGi6g1v0218100_LC | 42 | ||
– | Retrotransposon protein, putative, Ty3-gypsy subclass; TAIR: ATMG00860.1 DNA/RNA polymerases superfamily protein (ChrM); Swiss-Prot: sp|Q99315|YG31B_YEAST Transposon Ty3-G Gag-Pol polyprotein; TrEMBL-Plants: tr|A0A061FHZ8|A0A061FHZ8_THECC DNA/RNA polymerases superfamily protein; Found in the gene: LotjaGi6g1v0218100_LC | 42 | ||
– | Retrotransposon protein, putative, Ty3-gypsy subclass; TAIR: ATMG00860.1 DNA/RNA polymerases superfamily protein (ChrM); Swiss-Prot: sp|Q99315|YG31B_YEAST Transposon Ty3-G Gag-Pol polyprotein; TrEMBL-Plants: tr|A0A061FHZ8|A0A061FHZ8_THECC DNA/RNA polymerases superfamily protein; Found in the gene: LotjaGi6g1v0218100_LC | 42 | ||
– | Transposon Ty3-G Gag-Pol polyprotein; TAIR: AT3G42723.1 ATP binding / aminoacyl-tRNA ligase/ nucleotide binding protein; Swiss-Prot: sp|Q7TN75|PEG10_MOUSE Retrotransposon-derived protein PEG10; TrEMBL-Plants: tr|A0A151RSW7|A0A151RSW7_CAJCA Transposon Ty3-G Gag-Pol polyprotein; Found in the gene: LotjaGi6g1v0279900 | 10 | ||
– | Transposon Ty3-G Gag-Pol polyprotein; TAIR: AT3G29750.1 Eukaryotic aspartyl protease family protein; Swiss-Prot: sp|P18479|POLG_ZYMVC Genome polyprotein; TrEMBL-Plants: tr|Q3C0I0|Q3C0I0_LOTJA Putative uncharacterized protein; Found in the gene: LotjaGi6g1v0334500 | 9 |
A list of co-occurring predicted domains within the L. japonicus gene space:
Predicted domain | Source | Observations | Saturation (%) |
---|---|---|---|
cd00303 | CDD | 1 | 0.91 |