Domain Predictions — View

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PTHR34222:SF13

Source: PANTHER

Description

No description is available for this domain.

Associated GO terms

Unable to find any GO terms for the transcript with the identifier.

Associated Lotus transcripts 21

Transcript	Name	Description	Predicted domains	Domain count
LotjaGi1g1v0161600_LC.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Retrovirus-related Pol polyprotein from transposon TNT 1-94; TAIR: AT4G26630.1 DEK domain-containing chromatin associated protein; Swiss-Prot: sp\|B8ES44\|MTNA_METSB Methylthioribose-1-phosphate isomerase; TrEMBL-Plants: tr\|A0A151TMU7\|A0A151TMU7_CAJCA Retrovirus-related Pol polyprotein from transposon TNT 1-94; Found in the gene: LotjaGi1g1v0161600_LC	Domains IPR036875 PTHR34222 PTHR34222:SF13 SSF57756 mobidb-lite	5
LotjaGi1g1v0210200.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Retrovirus-related Pol polyprotein from transposon TNT 1-94; TAIR: AT5G48050.1 Copia-like polyprotein/retrotransposon; Swiss-Prot: sp\|P10978\|POLX_TOBAC Retrovirus-related Pol polyprotein from transposon TNT 1-94; TrEMBL-Plants: tr\|I3T814\|I3T814_LOTJA Uncharacterized protein; Found in the gene: LotjaGi1g1v0210200	Domains PF14223 PTHR34222 PTHR34222:SF13 mobidb-lite	5
LotjaGi1g1v0464100_LC.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Retrovirus-related Pol polyprotein from transposon TNT 1-94; TAIR: AT5G48050.1 Copia-like polyprotein/retrotransposon; Swiss-Prot: sp\|P10978\|POLX_TOBAC Retrovirus-related Pol polyprotein from transposon TNT 1-94; TrEMBL-Plants: tr\|A0A151T2P7\|A0A151T2P7_CAJCA Retrovirus-related Pol polyprotein from transposon TNT 1-94; Found in the gene: LotjaGi1g1v0464100_LC	Domains PF14223 PTHR34222 PTHR34222:SF13 mobidb-lite	5
LotjaGi1g1v0464100_LC.2 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Retrovirus-related Pol polyprotein from transposon TNT 1-94; TAIR: AT5G48050.1 Copia-like polyprotein/retrotransposon; Swiss-Prot: sp\|P10978\|POLX_TOBAC Retrovirus-related Pol polyprotein from transposon TNT 1-94; TrEMBL-Plants: tr\|A0A151T2P7\|A0A151T2P7_CAJCA Retrovirus-related Pol polyprotein from transposon TNT 1-94; Found in the gene: LotjaGi1g1v0464100_LC	Domains PF14223 PTHR34222 PTHR34222:SF13 mobidb-lite	5
LotjaGi1g1v0464100_LC.3 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Retrovirus-related Pol polyprotein from transposon TNT 1-94; TAIR: AT5G48050.1 Copia-like polyprotein/retrotransposon; Swiss-Prot: sp\|P10978\|POLX_TOBAC Retrovirus-related Pol polyprotein from transposon TNT 1-94; TrEMBL-Plants: tr\|A0A151T2P7\|A0A151T2P7_CAJCA Retrovirus-related Pol polyprotein from transposon TNT 1-94; Found in the gene: LotjaGi1g1v0464100_LC	Domains PF14223 PTHR34222 PTHR34222:SF13 mobidb-lite	5
LotjaGi1g1v0464100_LC.4 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Retrovirus-related Pol polyprotein from transposon TNT 1-94; TAIR: AT5G48050.1 Copia-like polyprotein/retrotransposon; Swiss-Prot: sp\|P10978\|POLX_TOBAC Retrovirus-related Pol polyprotein from transposon TNT 1-94; TrEMBL-Plants: tr\|A0A151T2P7\|A0A151T2P7_CAJCA Retrovirus-related Pol polyprotein from transposon TNT 1-94; Found in the gene: LotjaGi1g1v0464100_LC	Domains PF14223 PTHR34222 PTHR34222:SF13 mobidb-lite	5
LotjaGi1g1v0499600.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Retrovirus-related Pol polyprotein from transposon TNT 1-94; TAIR: AT5G48050.1 Copia-like polyprotein/retrotransposon; Swiss-Prot: sp\|Q14DL0\|UBQLN_MOUSE Ubiquilin-like protein; TrEMBL-Plants: tr\|A0A151RZ91\|A0A151RZ91_CAJCA Retrovirus-related Pol polyprotein from transposon TNT 1-94; Found in the gene: LotjaGi1g1v0499600	Domains PF14223 PTHR34222 PTHR34222:SF13 mobidb-lite	5
LotjaGi1g1v0623700_LC.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Retrovirus-related Pol polyprotein from transposon TNT 1-94; TAIR: AT5G48050.1 Copia-like polyprotein/retrotransposon; Swiss-Prot: sp\|Q9UQQ1\|NALDL_HUMAN N-acetylated-alpha-linked acidic dipeptidase-like protein; TrEMBL-Plants: tr\|A0A151T2P7\|A0A151T2P7_CAJCA Retrovirus-related Pol polyprotein from transposon TNT 1-94; Found in the gene: LotjaGi1g1v0623700_LC	Domains PF14223 PTHR34222 PTHR34222:SF13	4
LotjaGi2g1v0131000.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Retrovirus-related Pol polyprotein from transposon TNT 1-94; TAIR: AT5G48050.1 Copia-like polyprotein/retrotransposon; Swiss-Prot: sp\|P10978\|POLX_TOBAC Retrovirus-related Pol polyprotein from transposon TNT 1-94; TrEMBL-Plants: tr\|A0A151RUP0\|A0A151RUP0_CAJCA Retrovirus-related Pol polyprotein from transposon TNT 1-94; Found in the gene: LotjaGi2g1v0131000	Domains PF14223 PTHR34222 PTHR34222:SF13 mobidb-lite	5
LotjaGi2g1v0131000.2 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Retrovirus-related Pol polyprotein from transposon TNT 1-94; TAIR: AT5G48050.1 Copia-like polyprotein/retrotransposon; Swiss-Prot: sp\|P10978\|POLX_TOBAC Retrovirus-related Pol polyprotein from transposon TNT 1-94; TrEMBL-Plants: tr\|A0A151RUP0\|A0A151RUP0_CAJCA Retrovirus-related Pol polyprotein from transposon TNT 1-94; Found in the gene: LotjaGi2g1v0131000	Domains PF14223 PTHR34222 PTHR34222:SF13 mobidb-lite	5
LotjaGi2g1v0152300_LC.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Retrovirus-related Pol polyprotein from transposon TNT 1-94; TAIR: AT5G48050.1 Copia-like polyprotein/retrotransposon; Swiss-Prot: sp\|P10978\|POLX_TOBAC Retrovirus-related Pol polyprotein from transposon TNT 1-94; TrEMBL-Plants: tr\|A0A151RQY5\|A0A151RQY5_CAJCA Retrovirus-related Pol polyprotein from transposon TNT 1-94; Found in the gene: LotjaGi2g1v0152300_LC	Domains IPR001878 IPR025724 PF13976 PF14223 PS50158 PTHR34222 PTHR34222:SF13 mobidb-lite	8
LotjaGi2g1v0270500.6 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Retrovirus-related Pol polyprotein from transposon TNT 1-94; TAIR: AT1G34070.1 Copia-like polyprotein/retrotransposon; Swiss-Prot: sp\|P10978\|POLX_TOBAC Retrovirus-related Pol polyprotein from transposon TNT 1-94; TrEMBL-Plants: tr\|A0A151QRR0\|A0A151QRR0_CAJCA Uncharacterized protein; Found in the gene: LotjaGi2g1v0270500	Domains Coil PF14223 PTHR34222 PTHR34222:SF13 mobidb-lite	6
LotjaGi3g1v0059900_LC.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Retrovirus-related Pol polyprotein from transposon TNT 1-94; TAIR: AT4G31810.1 ATP-dependent caseinolytic (Clp) protease/crotonase family protein; Swiss-Prot: sp\|A9B6J1\|RPOC_HERA2 DNA-directed RNA polymerase subunit beta'; TrEMBL-Plants: tr\|A0A151SBX1\|A0A151SBX1_CAJCA Retrovirus-related Pol polyprotein from transposon TNT 1-94; Found in the gene: LotjaGi3g1v0059900_LC	Domains IPR036875 PTHR34222 PTHR34222:SF13 SSF57756 mobidb-lite	5
LotjaGi3g1v0100300_LC.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Retrovirus-related Pol polyprotein from transposon TNT 1-94; TAIR: AT5G48050.1 Copia-like polyprotein/retrotransposon; Swiss-Prot: sp\|Q5B3C8\|NST1_EMENI Stress response protein nst1; TrEMBL-Plants: tr\|I3T814\|I3T814_LOTJA Uncharacterized protein; Found in the gene: LotjaGi3g1v0100300_LC	Domains Coil NON_CYTOPLASMIC_DOMAIN PF14223 PTHR34222 PTHR34222:SF13 SIGNAL_PEPTIDE SIGNAL_PEPTIDE_C_REGION SIGNAL_PEPTIDE_H_REGION SIGNAL_PEPTIDE_N_REGION SignalP-noTM TMhelix mobidb-lite	13
LotjaGi4g1v0044200_LC.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Retrovirus-related Pol polyprotein from transposon TNT 1-94; TAIR: AT1G21280.1 Copia-like polyprotein/retrotransposon; Swiss-Prot: sp\|Q8VDI9\|ALG9_MOUSE Alpha-1,2-mannosyltransferase ALG9; TrEMBL-Plants: tr\|I3T814\|I3T814_LOTJA Uncharacterized protein; Found in the gene: LotjaGi4g1v0044200_LC	Domains CYTOPLASMIC_DOMAIN NON_CYTOPLASMIC_DOMAIN PF14223 PTHR34222 PTHR34222:SF13 TRANSMEMBRANE	7
LotjaGi4g1v0071500_LC.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Retrovirus-related Pol polyprotein from transposon TNT 1-94; TAIR: AT1G34070.1 Copia-like polyprotein/retrotransposon; Swiss-Prot: sp\|P10978\|POLX_TOBAC Retrovirus-related Pol polyprotein from transposon TNT 1-94; TrEMBL-Plants: tr\|A0A151TAX5\|A0A151TAX5_CAJCA Retrovirus-related Pol polyprotein from transposon TNT 1-94; Found in the gene: LotjaGi4g1v0071500_LC	Domains Coil PF14223 PTHR34222 PTHR34222:SF13 mobidb-lite	6
LotjaGi4g1v0142600_LC.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Retrovirus-related Pol polyprotein from transposon TNT 1-94; TAIR: AT1G21280.1 Copia-like polyprotein/retrotransposon; Swiss-Prot: sp\|O74449\|YCG4_SCHPO Uncharacterized protein C16C4.04; TrEMBL-Plants: tr\|I3T814\|I3T814_LOTJA Uncharacterized protein; Found in the gene: LotjaGi4g1v0142600_LC	Domains PTHR34222 PTHR34222:SF13	3
LotjaGi4g1v0190800_LC.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Retrovirus-related Pol polyprotein from transposon TNT 1-94; TAIR: AT4G17540.1 dynamin; Swiss-Prot: sp\|Q03M88\|IF2_STRTD Translation initiation factor IF-2; TrEMBL-Plants: tr\|A0A1B5Z862\|A0A1B5Z862_TRISU Uncharacterized protein; Found in the gene: LotjaGi4g1v0190800_LC	Domains Coil PTHR34222 PTHR34222:SF13 mobidb-lite	5
LotjaGi4g1v0265900_LC.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Retrovirus-related Pol polyprotein from transposon TNT 1-94; TAIR: AT5G48050.1 Copia-like polyprotein/retrotransposon; Swiss-Prot: sp\|Q7X9H9\|AGL93_ARATH Agamous-like MADS-box protein AGL93; TrEMBL-Plants: tr\|I3T814\|I3T814_LOTJA Uncharacterized protein; Found in the gene: LotjaGi4g1v0265900_LC	Domains NON_CYTOPLASMIC_DOMAIN PF14223 PTHR34222 PTHR34222:SF13 SIGNAL_PEPTIDE SIGNAL_PEPTIDE_C_REGION SIGNAL_PEPTIDE_H_REGION SIGNAL_PEPTIDE_N_REGION mobidb-lite	10
LotjaGi6g1v0166100.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Retrovirus-related Pol polyprotein from transposon TNT 1-94; TAIR: AT5G48050.1 Copia-like polyprotein/retrotransposon; Swiss-Prot: sp\|P0CP47\|PABP_CRYNB Polyadenylate-binding protein, cytoplasmic and nuclear; TrEMBL-Plants: tr\|A0A151QRR0\|A0A151QRR0_CAJCA Uncharacterized protein; Found in the gene: LotjaGi6g1v0166100	Domains Coil PF14223 PTHR34222 PTHR34222:SF13 mobidb-lite	6
LotjaGi6g1v0272400_LC.2 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Retrovirus-related Pol polyprotein from transposon TNT 1-94; TAIR: AT5G48050.1 Copia-like polyprotein/retrotransposon; Swiss-Prot: sp\|Q5ZL57\|COPD_CHICK Coatomer subunit delta; TrEMBL-Plants: tr\|I3T814\|I3T814_LOTJA Uncharacterized protein; Found in the gene: LotjaGi6g1v0272400_LC	Domains PF14223 PTHR34222 PTHR34222:SF13 mobidb-lite	5

Co-occuring domains 1

A list of co-occurring predicted domains within the L. japonicus gene space:

Predicted domain	Source	Observations	Saturation (%)
mobidb-lite	MobiDBLite	1	4.76