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Transcript | Name | Description | Predicted domains | Domain count |
---|---|---|---|---|
– | Integrase core domain containing protein [Solanum demissum] gi|113205290|gb|ABI34329.1| | 4 | ||
– | Integrase core domain containing protein [Solanum demissum] gi|113205290|gb|ABI34329.1| | 4 | ||
– | Beta-galactosidase [Medicago truncatula] gi|357453875|ref|XP_003597218.1| | 4 | ||
– | Integrase core domain containing protein [Phaseolus vulgaris] gi|396582343|gb|AFN88207.1| | 3 | ||
– | Uncharacterized protein isoform 2 [Theobroma cacao] gi|508717766|gb|EOY09663.1| | 2 | ||
– | F27F5.19 [Arabidopsis thaliana] gi|7767664|gb|AAF69161.1|AC007915_13 | 6 | ||
– | Beta-galactosidase [Medicago truncatula] gi|357453875|ref|XP_003597218.1| | 4 | ||
– | 3 | |||
– | Cysteine-rich RLK (RECEPTOR-like protein kinase) 8 [Theobroma cacao] gi|508724739|gb|EOY16636.1| | 4 | ||
– | Receptor-like serine/threonine kinase [Glycine max] gi|351726698|ref|NP_001238159.1| | 4 | ||
– | Integrase core domain containing protein [Solanum demissum] gi|113205290|gb|ABI34329.1| | 8 | ||
– | Integrase core domain containing protein [Solanum demissum] gi|113205290|gb|ABI34329.1| | 3 | ||
– | Integrase core domain containing protein [Solanum demissum] gi|113205290|gb|ABI34329.1| | 3 | ||
– | F27F5.19 [Arabidopsis thaliana] gi|7767664|gb|AAF69161.1|AC007915_13 | 7 | ||
– | Cysteine-rich RLK (RECEPTOR-like protein kinase) 8 [Theobroma cacao] gi|508724739|gb|EOY16636.1| | 3 | ||
– | PREDICTED: LOW QUALITY PROTEIN: polyadenylate-binding protein 3 [Vitis vinifera] gi|359495203|ref|XP_002263507.2| | 8 | ||
– | Integrase core domain containing protein [Solanum demissum] gi|113205290|gb|ABI34329.1| | 4 | ||
– | Cysteine-rich RLK (RECEPTOR-like protein kinase) 8 [Theobroma cacao] gi|508724739|gb|EOY16636.1| | 5 | ||
– | Retrovirus-related Pol polyprotein from transposon TNT 1-94; TAIR: AT5G48050.1 Copia-like polyprotein/retrotransposon; Swiss-Prot: sp|P0ACL6|GLCC_ECOL6 Glc operon transcriptional activator; TrEMBL-Plants: tr|A0A151TTX5|A0A151TTX5_CAJCA Uncharacterized protein; Found in the gene: LotjaGi1g1v0018900_LC | 5 | ||
– | Retrovirus-related Pol polyprotein from transposon TNT 1-94; TAIR: AT1G21280.1 Copia-like polyprotein/retrotransposon; Swiss-Prot: sp|P10978|POLX_TOBAC Retrovirus-related Pol polyprotein from transposon TNT 1-94; TrEMBL-Plants: tr|A0A151QYF6|A0A151QYF6_CAJCA Uncharacterized protein; Found in the gene: LotjaGi1g1v0031100 | 8 | ||
– | Retrovirus-related Pol polyprotein from transposon TNT 1-94; TAIR: AT3G07540.1 Actin-binding FH2 (formin homology 2) family protein; Swiss-Prot: sp|P10978|POLX_TOBAC Retrovirus-related Pol polyprotein from transposon TNT 1-94; TrEMBL-Plants: tr|A0A1J3CNN0|A0A1J3CNN0_NOCCA Uncharacterized protein; Found in the gene: LotjaGi1g1v0135900 | 5 | ||
– | Retrovirus-related Pol polyprotein from transposon TNT 1-94; TAIR: AT4G26630.1 DEK domain-containing chromatin associated protein; Swiss-Prot: sp|B8ES44|MTNA_METSB Methylthioribose-1-phosphate isomerase; TrEMBL-Plants: tr|A0A151TMU7|A0A151TMU7_CAJCA Retrovirus-related Pol polyprotein from transposon TNT 1-94; Found in the gene: LotjaGi1g1v0161600_LC | 5 | ||
– | Retrovirus-related Pol polyprotein from transposon TNT 1-94; TAIR: AT5G48050.1 Copia-like polyprotein/retrotransposon; Swiss-Prot: sp|P10978|POLX_TOBAC Retrovirus-related Pol polyprotein from transposon TNT 1-94; TrEMBL-Plants: tr|I3T814|I3T814_LOTJA Uncharacterized protein; Found in the gene: LotjaGi1g1v0210200 | 5 | ||
– | Retrovirus-related Pol polyprotein from transposon TNT 1-94; TAIR: AT1G21280.1 Copia-like polyprotein/retrotransposon; Swiss-Prot: sp|P19558|GAG_BIV29 Gag polyprotein; TrEMBL-Plants: tr|A0A151QYF6|A0A151QYF6_CAJCA Uncharacterized protein; Found in the gene: LotjaGi1g1v0253100 | 7 | ||
– | Retrovirus-related Pol polyprotein from transposon TNT 1-94; TAIR: AT1G21280.1 Copia-like polyprotein/retrotransposon; Swiss-Prot: sp|Q7TN75|PEG10_MOUSE Retrotransposon-derived protein PEG10; TrEMBL-Plants: tr|A0A0S3SX19|A0A0S3SX19_PHAAN Uncharacterized protein; Found in the gene: LotjaGi1g1v0256300 | 7 | ||
– | Retrovirus-related Pol polyprotein from transposon TNT 1-94; TAIR: AT1G21280.1 Copia-like polyprotein/retrotransposon; Swiss-Prot: sp|Q06AK6|TFP11_PIG Tuftelin-interacting protein 11; TrEMBL-Plants: tr|Q2HU07|Q2HU07_MEDTR Polynucleotidyl transferase, Ribonuclease H fold; Found in the gene: LotjaGi1g1v0297500 | 6 | ||
– | Retrovirus-related Pol polyprotein from transposon TNT 1-94; TAIR: AT1G21280.1 Copia-like polyprotein/retrotransposon; Swiss-Prot: sp|Q06AK6|TFP11_PIG Tuftelin-interacting protein 11; TrEMBL-Plants: tr|A0A151QYF6|A0A151QYF6_CAJCA Uncharacterized protein; Found in the gene: LotjaGi1g1v0297500 | 6 | ||
– | Retrovirus-related Pol polyprotein from transposon TNT 1-94; TAIR: AT3G21000.1 Gag-Pol-related retrotransposon family protein; Swiss-Prot: sp|Q65JJ2|RASP_BACLD Zinc metalloprotease RasP; TrEMBL-Plants: tr|A0A0B2SFD5|A0A0B2SFD5_GLYSO Uncharacterized protein; Found in the gene: LotjaGi1g1v0329400_LC | 4 | ||
– | Retrovirus-related Pol polyprotein from transposon TNT 1-94; TAIR: AT3G20980.1 Gag-Pol-related retrotransposon family protein; Swiss-Prot: sp|P25601|YCH5_YEAST Putative transposon Ty5-1 protein YCL075W; TrEMBL-Plants: tr|A0A151SFK6|A0A151SFK6_CAJCA Retrovirus-related Pol polyprotein from transposon TNT 1-94; Found in the gene: LotjaGi1g1v0392800_LC | 10 | ||
– | Gag-pol polyprotein; TAIR: AT3G53500.2 RNA-binding (RRM/RBD/RNP motifs) family protein with retrovirus zinc finger-like domain-containing protein; Swiss-Prot: sp|Q8AII2|GAG_SIVTN Gag polyprotein; TrEMBL-Plants: tr|A0A151SZ39|A0A151SZ39_CAJCA Retrovirus-related Pol polyprotein from transposon TNT 1-94; Found in the gene: LotjaGi1g1v0406600_LC | 9 | ||
– | Retrovirus-related Pol polyprotein from transposon TNT 1-94; TAIR: AT5G48050.1 Copia-like polyprotein/retrotransposon; Swiss-Prot: sp|P10978|POLX_TOBAC Retrovirus-related Pol polyprotein from transposon TNT 1-94; TrEMBL-Plants: tr|A0A151T2P7|A0A151T2P7_CAJCA Retrovirus-related Pol polyprotein from transposon TNT 1-94; Found in the gene: LotjaGi1g1v0464100_LC | 5 | ||
– | Retrovirus-related Pol polyprotein from transposon TNT 1-94; TAIR: AT5G48050.1 Copia-like polyprotein/retrotransposon; Swiss-Prot: sp|P10978|POLX_TOBAC Retrovirus-related Pol polyprotein from transposon TNT 1-94; TrEMBL-Plants: tr|A0A151T2P7|A0A151T2P7_CAJCA Retrovirus-related Pol polyprotein from transposon TNT 1-94; Found in the gene: LotjaGi1g1v0464100_LC | 5 | ||
– | Retrovirus-related Pol polyprotein from transposon TNT 1-94; TAIR: AT5G48050.1 Copia-like polyprotein/retrotransposon; Swiss-Prot: sp|P10978|POLX_TOBAC Retrovirus-related Pol polyprotein from transposon TNT 1-94; TrEMBL-Plants: tr|A0A151T2P7|A0A151T2P7_CAJCA Retrovirus-related Pol polyprotein from transposon TNT 1-94; Found in the gene: LotjaGi1g1v0464100_LC | 5 | ||
– | Retrovirus-related Pol polyprotein from transposon TNT 1-94; TAIR: AT5G48050.1 Copia-like polyprotein/retrotransposon; Swiss-Prot: sp|P10978|POLX_TOBAC Retrovirus-related Pol polyprotein from transposon TNT 1-94; TrEMBL-Plants: tr|A0A151T2P7|A0A151T2P7_CAJCA Retrovirus-related Pol polyprotein from transposon TNT 1-94; Found in the gene: LotjaGi1g1v0464100_LC | 5 | ||
– | Retrovirus-related Pol polyprotein from transposon TNT 1-94; TAIR: AT5G48050.1 Copia-like polyprotein/retrotransposon; Swiss-Prot: sp|P14733|LMNB1_MOUSE Lamin-B1; TrEMBL-Plants: tr|A0A151SDU3|A0A151SDU3_CAJCA Uncharacterized protein; Found in the gene: LotjaGi1g1v0495100_LC | 4 | ||
– | Retrovirus-related Pol polyprotein from transposon TNT 1-94; TAIR: AT5G48050.1 Copia-like polyprotein/retrotransposon; Swiss-Prot: sp|Q14DL0|UBQLN_MOUSE Ubiquilin-like protein; TrEMBL-Plants: tr|A0A151RZ91|A0A151RZ91_CAJCA Retrovirus-related Pol polyprotein from transposon TNT 1-94; Found in the gene: LotjaGi1g1v0499600 | 5 | ||
– | Retrovirus-related Pol polyprotein from transposon TNT 1-94; TAIR: AT1G21280.1 Copia-like polyprotein/retrotransposon; Swiss-Prot: sp|A8FL10|DNLJ_CAMJ8 DNA ligase; TrEMBL-Plants: tr|A0A151TMA1|A0A151TMA1_CAJCA Retrovirus-related Pol polyprotein from transposon TNT 1-94; Found in the gene: LotjaGi1g1v0512600 | 11 | ||
– | Polyprotein; TAIR: AT1G21280.1 Copia-like polyprotein/retrotransposon; Swiss-Prot: sp|Q7T6X2|YR826_MIMIV Putative serine/threonine-protein kinase/receptor R826; TrEMBL-Plants: tr|A0A151R7U6|A0A151R7U6_CAJCA Retrovirus-related Pol polyprotein from transposon TNT 1-94; Found in the gene: LotjaGi1g1v0612900_LC | 7 | ||
– | Retrovirus-related Pol polyprotein from transposon TNT 1-94; TAIR: AT5G48050.1 Copia-like polyprotein/retrotransposon; Swiss-Prot: sp|Q9UQQ1|NALDL_HUMAN N-acetylated-alpha-linked acidic dipeptidase-like protein; TrEMBL-Plants: tr|A0A151T2P7|A0A151T2P7_CAJCA Retrovirus-related Pol polyprotein from transposon TNT 1-94; Found in the gene: LotjaGi1g1v0623700_LC | 4 | ||
– | Retrovirus-related Pol polyprotein from transposon TNT 1-94; TAIR: AT1G21280.1 Copia-like polyprotein/retrotransposon; Swiss-Prot: sp|Q7TN75|PEG10_MOUSE Retrotransposon-derived protein PEG10; TrEMBL-Plants: tr|A0A0S3SX19|A0A0S3SX19_PHAAN Uncharacterized protein; Found in the gene: LotjaGi1g1v0655800 | 7 | ||
– | Retrovirus-related Pol polyprotein from transposon TNT 1-94; TAIR: AT3G21000.1 Gag-Pol-related retrotransposon family protein; Swiss-Prot: sp|P10978|POLX_TOBAC Retrovirus-related Pol polyprotein from transposon TNT 1-94; TrEMBL-Plants: tr|A0A0B2R495|A0A0B2R495_GLYSO Retrovirus-related Pol polyprotein from transposon TNT 1-94; Found in the gene: LotjaGi1g1v0667500_LC | 6 | ||
– | Retrovirus-related Pol polyprotein from transposon TNT 1-94; TAIR: AT1G21280.1 Copia-like polyprotein/retrotransposon; Swiss-Prot: sp|Q7TN75|PEG10_MOUSE Retrotransposon-derived protein PEG10; TrEMBL-Plants: tr|A0A0S3SX19|A0A0S3SX19_PHAAN Uncharacterized protein; Found in the gene: LotjaGi1g1v0674500 | 6 | ||
– | Retrovirus-related Pol polyprotein from transposon TNT 1-94; TAIR: AT3G50460.1 homolog of RPW8 2; Swiss-Prot: sp|B1YRY9|G6PI_BURA4 Glucose-6-phosphate isomerase; TrEMBL-Plants: tr|A0A087GNU0|A0A087GNU0_ARAAL Uncharacterized protein; Found in the gene: LotjaGi1g1v0695400_LC | 3 | ||
– | Retrovirus-related Pol polyprotein from transposon TNT 1-94; TAIR: AT1G21280.1 Copia-like polyprotein/retrotransposon; Swiss-Prot: sp|P10978|POLX_TOBAC Retrovirus-related Pol polyprotein from transposon TNT 1-94; TrEMBL-Plants: tr|V7BF82|V7BF82_PHAVU Uncharacterized protein; Found in the gene: LotjaGi1g1v0723000 | 5 | ||
– | Retrovirus-related Pol polyprotein from transposon TNT 1-94; TAIR: AT3G21000.1 Gag-Pol-related retrotransposon family protein; Swiss-Prot: sp|B9DTE3|PNP_STRU0 Polyribonucleotide nucleotidyltransferase; TrEMBL-Plants: tr|A0A151SFK6|A0A151SFK6_CAJCA Retrovirus-related Pol polyprotein from transposon TNT 1-94; Found in the gene: LotjaGi1g1v0754200_LC | 11 | ||
– | Retrovirus-related Pol polyprotein from transposon TNT 1-94; TAIR: AT1G21280.1 Copia-like polyprotein/retrotransposon; Swiss-Prot: sp|Q8LPK0|AB8A_ARATH ABC transporter A family member 8; TrEMBL-Plants: tr|A0A151QYF6|A0A151QYF6_CAJCA Uncharacterized protein; Found in the gene: LotjaGi2g1v0098400 | 7 | ||
– | Retrovirus-related Pol polyprotein from transposon TNT 1-94; TAIR: AT5G48050.1 Copia-like polyprotein/retrotransposon; Swiss-Prot: sp|P10978|POLX_TOBAC Retrovirus-related Pol polyprotein from transposon TNT 1-94; TrEMBL-Plants: tr|A0A151RUP0|A0A151RUP0_CAJCA Retrovirus-related Pol polyprotein from transposon TNT 1-94; Found in the gene: LotjaGi2g1v0131000 | 5 | ||
– | Retrovirus-related Pol polyprotein from transposon TNT 1-94; TAIR: AT5G48050.1 Copia-like polyprotein/retrotransposon; Swiss-Prot: sp|P10978|POLX_TOBAC Retrovirus-related Pol polyprotein from transposon TNT 1-94; TrEMBL-Plants: tr|A0A151RUP0|A0A151RUP0_CAJCA Retrovirus-related Pol polyprotein from transposon TNT 1-94; Found in the gene: LotjaGi2g1v0131000 | 5 | ||
– | Retrovirus-related Pol polyprotein from transposon TNT 1-94; TAIR: AT5G48050.1 Copia-like polyprotein/retrotransposon; Swiss-Prot: sp|A3CKD3|RPOB_STRSV DNA-directed RNA polymerase subunit beta; TrEMBL-Plants: tr|A0A151RUP0|A0A151RUP0_CAJCA Retrovirus-related Pol polyprotein from transposon TNT 1-94; Found in the gene: LotjaGi2g1v0145500_LC | 3 | ||
– | Retrovirus-related Pol polyprotein from transposon TNT 1-94; TAIR: AT5G48050.1 Copia-like polyprotein/retrotransposon; Swiss-Prot: sp|P10978|POLX_TOBAC Retrovirus-related Pol polyprotein from transposon TNT 1-94; TrEMBL-Plants: tr|A0A151RQY5|A0A151RQY5_CAJCA Retrovirus-related Pol polyprotein from transposon TNT 1-94; Found in the gene: LotjaGi2g1v0152300_LC | 8 | ||
– | Retrovirus-related Pol polyprotein from transposon TNT 1-94; TAIR: AT1G34070.1 Copia-like polyprotein/retrotransposon; Swiss-Prot: sp|P10978|POLX_TOBAC Retrovirus-related Pol polyprotein from transposon TNT 1-94; TrEMBL-Plants: tr|A0A151QRR0|A0A151QRR0_CAJCA Uncharacterized protein; Found in the gene: LotjaGi2g1v0270500 | 6 | ||
– | Retrovirus-related Pol polyprotein from transposon TNT 1-94; TAIR: AT4G31810.1 ATP-dependent caseinolytic (Clp) protease/crotonase family protein; Swiss-Prot: sp|A9B6J1|RPOC_HERA2 DNA-directed RNA polymerase subunit beta'; TrEMBL-Plants: tr|A0A151SBX1|A0A151SBX1_CAJCA Retrovirus-related Pol polyprotein from transposon TNT 1-94; Found in the gene: LotjaGi3g1v0059900_LC | 5 | ||
– | Retrovirus-related Pol polyprotein from transposon TNT 1-94; TAIR: AT5G48050.1 Copia-like polyprotein/retrotransposon; Swiss-Prot: sp|Q5B3C8|NST1_EMENI Stress response protein nst1; TrEMBL-Plants: tr|I3T814|I3T814_LOTJA Uncharacterized protein; Found in the gene: LotjaGi3g1v0100300_LC | 13 | ||
– | Retrovirus-related Pol polyprotein from transposon TNT 1-94; TAIR: AT1G21280.1 Copia-like polyprotein/retrotransposon; Swiss-Prot: sp|Q9C0B0|UNK_HUMAN RING finger protein unkempt homolog; TrEMBL-Plants: tr|A0A151QYF6|A0A151QYF6_CAJCA Uncharacterized protein; Found in the gene: LotjaGi3g1v0117200 | 6 | ||
– | Retrovirus-related Pol polyprotein from transposon TNT 1-94; TAIR: AT1G21280.1 Copia-like polyprotein/retrotransposon; Swiss-Prot: sp|A6U1Q5|EBH_STAA2 Extracellular matrix-binding protein ebh; TrEMBL-Plants: tr|A0A151TNK9|A0A151TNK9_CAJCA Retrovirus-related Pol polyprotein from transposon TNT 1-94; Found in the gene: LotjaGi3g1v0133900 | 6 | ||
– | Retrovirus-related Pol polyprotein from transposon TNT 1-94; TAIR: AT4G01240.1 S-adenosyl-L-methionine-dependent methyltransferases superfamily protein; Swiss-Prot: sp|C0NAB3|P20D1_AJECG Probable carboxypeptidase HCBG_00059; TrEMBL-Plants: tr|A0A151RZC3|A0A151RZC3_CAJCA Retrovirus-related Pol polyprotein from transposon TNT 1-94; Found in the gene: LotjaGi3g1v0256500_LC | 4 | ||
– | Retrovirus-related Pol polyprotein from transposon TNT 1-94; TAIR: AT1G21280.1 Copia-like polyprotein/retrotransposon; Swiss-Prot: sp|P10978|POLX_TOBAC Retrovirus-related Pol polyprotein from transposon TNT 1-94; TrEMBL-Plants: tr|A0A151TNK9|A0A151TNK9_CAJCA Retrovirus-related Pol polyprotein from transposon TNT 1-94; Found in the gene: LotjaGi3g1v0273600 | 6 | ||
– | Retrovirus-related Pol polyprotein from transposon TNT 1-94; TAIR: AT1G21280.1 Copia-like polyprotein/retrotransposon; Swiss-Prot: sp|A0A0C4DH33|HV124_HUMAN Immunoglobulin heavy variable 1-24; TrEMBL-Plants: tr|A0A151TNK9|A0A151TNK9_CAJCA Retrovirus-related Pol polyprotein from transposon TNT 1-94; Found in the gene: LotjaGi3g1v0273600 | 6 | ||
– | Retrovirus-related Pol polyprotein from transposon TNT 1-94; TAIR: AT1G21280.1 Copia-like polyprotein/retrotransposon; Swiss-Prot: sp|Q864S8|BRCA2_FELCA Breast cancer type 2 susceptibility protein homolog; TrEMBL-Plants: tr|A0A151QSM9|A0A151QSM9_CAJCA Retrovirus-related Pol polyprotein from transposon TNT 1-94; Found in the gene: LotjaGi3g1v0277800 | 6 | ||
– | Retrovirus-related Pol polyprotein from transposon TNT 1-94; TAIR: AT1G21280.1 Copia-like polyprotein/retrotransposon; Swiss-Prot: sp|B9W9Z5|LCL3_CANDC Probable endonuclease LCL3; TrEMBL-Plants: tr|A0A151QYF6|A0A151QYF6_CAJCA Uncharacterized protein; Found in the gene: LotjaGi3g1v0353500 | 7 | ||
– | Retrovirus-related Pol polyprotein from transposon TNT 1-94; TAIR: AT1G21280.1 Copia-like polyprotein/retrotransposon; Swiss-Prot: sp|A8FL10|DNLJ_CAMJ8 DNA ligase; TrEMBL-Plants: tr|A0A151TMA1|A0A151TMA1_CAJCA Retrovirus-related Pol polyprotein from transposon TNT 1-94; Found in the gene: LotjaGi3g1v0357400 | 11 | ||
– | Retrovirus-related Pol polyprotein from transposon TNT 1-94; TAIR: AT1G21280.1 Copia-like polyprotein/retrotransposon; Swiss-Prot: sp|Q6BUT3|NST1_DEBHA Stress response protein NST1; TrEMBL-Plants: tr|A0A151RE46|A0A151RE46_CAJCA Retrovirus-related Pol polyprotein from transposon TNT 1-94; Found in the gene: LotjaGi3g1v0386800 | 6 | ||
– | Retrovirus-related Pol polyprotein from transposon TNT 1-94; TAIR: AT1G21280.1 Copia-like polyprotein/retrotransposon; Swiss-Prot: sp|P04146|COPIA_DROME Copia protein; TrEMBL-Plants: tr|A0A151TMA1|A0A151TMA1_CAJCA Retrovirus-related Pol polyprotein from transposon TNT 1-94; Found in the gene: LotjaGi4g1v0033100_LC | 11 | ||
– | Retrovirus-related Pol polyprotein from transposon TNT 1-94; TAIR: AT1G21280.1 Copia-like polyprotein/retrotransposon; Swiss-Prot: sp|Q8VDI9|ALG9_MOUSE Alpha-1,2-mannosyltransferase ALG9; TrEMBL-Plants: tr|I3T814|I3T814_LOTJA Uncharacterized protein; Found in the gene: LotjaGi4g1v0044200_LC | 7 | ||
– | Retrovirus-related Pol polyprotein from transposon TNT 1-94; TAIR: AT1G34070.1 Copia-like polyprotein/retrotransposon; Swiss-Prot: sp|P10978|POLX_TOBAC Retrovirus-related Pol polyprotein from transposon TNT 1-94; TrEMBL-Plants: tr|A0A151TAX5|A0A151TAX5_CAJCA Retrovirus-related Pol polyprotein from transposon TNT 1-94; Found in the gene: LotjaGi4g1v0071500_LC | 6 | ||
– | Retrovirus-related Pol polyprotein from transposon TNT 1-94; TAIR: AT1G21280.1 Copia-like polyprotein/retrotransposon; Swiss-Prot: sp|Q4J8F0|ARLY_SULAC Argininosuccinate lyase; TrEMBL-Plants: tr|A0A151SEJ5|A0A151SEJ5_CAJCA Uncharacterized protein; Found in the gene: LotjaGi4g1v0112300 | 7 | ||
– | Retrovirus-related Pol polyprotein from transposon TNT 1-94; TAIR: AT1G21280.1 Copia-like polyprotein/retrotransposon; Swiss-Prot: sp|O74449|YCG4_SCHPO Uncharacterized protein C16C4.04; TrEMBL-Plants: tr|I3T814|I3T814_LOTJA Uncharacterized protein; Found in the gene: LotjaGi4g1v0142600_LC | 3 | ||
– | Retrovirus-related Pol polyprotein from transposon TNT 1-94; TAIR: AT5G05530.1 RING/U-box superfamily protein; Swiss-Prot: sp|D4GS48|G6PD_HALVD NAD-dependent glucose-6-phosphate dehydrogenase; TrEMBL-Plants: tr|A0A151TIU7|A0A151TIU7_CAJCA Uncharacterized protein; Found in the gene: LotjaGi4g1v0186100_LC | 4 | ||
– | Retrovirus-related Pol polyprotein from transposon TNT 1-94; TAIR: AT4G17540.1 dynamin; Swiss-Prot: sp|Q03M88|IF2_STRTD Translation initiation factor IF-2; TrEMBL-Plants: tr|A0A1B5Z862|A0A1B5Z862_TRISU Uncharacterized protein; Found in the gene: LotjaGi4g1v0190800_LC | 5 | ||
– | Retrovirus-related Pol polyprotein from transposon TNT 1-94; TAIR: AT1G21280.1 Copia-like polyprotein/retrotransposon; Swiss-Prot: sp|A7ZUN0|ACEK_ECO24 Isocitrate dehydrogenase kinase/phosphatase; TrEMBL-Plants: tr|A0A151TMA1|A0A151TMA1_CAJCA Retrovirus-related Pol polyprotein from transposon TNT 1-94; Found in the gene: LotjaGi4g1v0257600 | 9 | ||
– | Retrovirus-related Pol polyprotein from transposon TNT 1-94; TAIR: AT1G21280.1 Copia-like polyprotein/retrotransposon; Swiss-Prot: sp|Q022S9|XYLA_SOLUE Xylose isomerase; TrEMBL-Plants: tr|A0A151U9A5|A0A151U9A5_CAJCA Retrovirus-related Pol polyprotein from transposon TNT 1-94; Found in the gene: LotjaGi4g1v0260100 | 7 | ||
– | Retrovirus-related Pol polyprotein from transposon TNT 1-94; TAIR: AT5G48050.1 Copia-like polyprotein/retrotransposon; Swiss-Prot: sp|Q7X9H9|AGL93_ARATH Agamous-like MADS-box protein AGL93; TrEMBL-Plants: tr|I3T814|I3T814_LOTJA Uncharacterized protein; Found in the gene: LotjaGi4g1v0265900_LC | 10 | ||
– | Retrovirus-related Pol polyprotein from transposon TNT 1-94; TAIR: AT1G21280.1 Copia-like polyprotein/retrotransposon; Swiss-Prot: sp|P10978|POLX_TOBAC Retrovirus-related Pol polyprotein from transposon TNT 1-94; TrEMBL-Plants: tr|A0A151TMA1|A0A151TMA1_CAJCA Retrovirus-related Pol polyprotein from transposon TNT 1-94; Found in the gene: LotjaGi4g1v0266500 | 6 | ||
– | Retrovirus-related Pol polyprotein from transposon TNT 1-94; TAIR: AT1G21280.1 Copia-like polyprotein/retrotransposon; Swiss-Prot: sp|Q3ANH5|MUTS_SYNSC DNA mismatch repair protein MutS; TrEMBL-Plants: tr|A0A151QYF6|A0A151QYF6_CAJCA Uncharacterized protein; Found in the gene: LotjaGi4g1v0313200 | 6 | ||
– | Retrovirus-related Pol polyprotein from transposon TNT 1-94; TAIR: AT1G21280.1 Copia-like polyprotein/retrotransposon; Swiss-Prot: sp|P0CG32|ZCC18_HUMAN Zinc finger CCHC domain-containing protein 18; TrEMBL-Plants: tr|A0A151TMA1|A0A151TMA1_CAJCA Retrovirus-related Pol polyprotein from transposon TNT 1-94; Found in the gene: LotjaGi4g1v0331100 | 6 | ||
– | Retrovirus-related Pol polyprotein from transposon TNT 1-94; TAIR: AT2G07760.1 Zinc knuckle (CCHC-type) family protein; Swiss-Prot: sp|Q09813|T111_SCHPO Putative transcription initiation factor TFIID 111 kDa subunit; TrEMBL-Plants: tr|A0A151TMA1|A0A151TMA1_CAJCA Retrovirus-related Pol polyprotein from transposon TNT 1-94; Found in the gene: LotjaGi4g1v0401600_LC | 7 | ||
– | Retrovirus-related Pol polyprotein from transposon TNT 1-94; TAIR: AT3G21000.1 Gag-Pol-related retrotransposon family protein; Swiss-Prot: sp|Q5HNG0|DAAA_STAEQ D-alanine aminotransferase; TrEMBL-Plants: tr|A0A151SFK6|A0A151SFK6_CAJCA Retrovirus-related Pol polyprotein from transposon TNT 1-94; Found in the gene: LotjaGi4g1v0427800_LC | 6 | ||
– | Retrovirus-related Pol polyprotein from transposon TNT 1-94; TAIR: AT1G21280.1 Copia-like polyprotein/retrotransposon; Swiss-Prot: sp|P23984|SCAF_ILTVT Capsid scaffolding protein; TrEMBL-Plants: tr|A0A0S3SX19|A0A0S3SX19_PHAAN Uncharacterized protein; Found in the gene: LotjaGi5g1v0025000 | 4 | ||
– | Retrovirus-related Pol polyprotein from transposon TNT 1-94; TAIR: AT1G21280.1 Copia-like polyprotein/retrotransposon; Swiss-Prot: sp|P36294|NCAP_TSWVS Nucleoprotein; TrEMBL-Plants: tr|A0A151TNK9|A0A151TNK9_CAJCA Retrovirus-related Pol polyprotein from transposon TNT 1-94; Found in the gene: LotjaGi5g1v0040800 | 6 | ||
– | Retrovirus-related Pol polyprotein from transposon TNT 1-94; TAIR: AT1G21280.1 Copia-like polyprotein/retrotransposon; Swiss-Prot: sp|O76743|GLH4_CAEEL ATP-dependent RNA helicase glh-4; TrEMBL-Plants: tr|A0A151TMA1|A0A151TMA1_CAJCA Retrovirus-related Pol polyprotein from transposon TNT 1-94; Found in the gene: LotjaGi5g1v0044900_LC | 6 | ||
– | Retrovirus-related Pol polyprotein from transposon TNT 1-94; TAIR: AT1G21280.1 Copia-like polyprotein/retrotransposon; Swiss-Prot: sp|Q7TN75|PEG10_MOUSE Retrotransposon-derived protein PEG10; TrEMBL-Plants: tr|A0A0S3SX19|A0A0S3SX19_PHAAN Uncharacterized protein; Found in the gene: LotjaGi5g1v0046700 | 6 | ||
– | Retrovirus-related Pol polyprotein from transposon TNT 1-94; TAIR: AT1G21280.1 Copia-like polyprotein/retrotransposon; Swiss-Prot: sp|A8F3R6|SYS_PSELT Serine--tRNA ligase; TrEMBL-Plants: tr|A0A0S3SX19|A0A0S3SX19_PHAAN Uncharacterized protein; Found in the gene: LotjaGi5g1v0056500 | 6 | ||
– | Retrovirus-related Pol polyprotein from transposon TNT 1-94; TAIR: AT1G21280.1 Copia-like polyprotein/retrotransposon; Swiss-Prot: sp|Q864S8|BRCA2_FELCA Breast cancer type 2 susceptibility protein homolog; TrEMBL-Plants: tr|A0A151TJ62|A0A151TJ62_CAJCA Retrovirus-related Pol polyprotein from transposon TNT 1-94; Found in the gene: LotjaGi5g1v0075300 | 5 | ||
– | Retrovirus-related Pol polyprotein from transposon TNT 1-94; TAIR: AT1G21280.1 Copia-like polyprotein/retrotransposon; Swiss-Prot: sp|P10978|POLX_TOBAC Retrovirus-related Pol polyprotein from transposon TNT 1-94; TrEMBL-Plants: tr|A0A151S4H3|A0A151S4H3_CAJCA Retrovirus-related Pol polyprotein from transposon TNT 1-94; Found in the gene: LotjaGi5g1v0116200 | 5 | ||
– | Retrovirus-related Pol polyprotein from transposon TNT 1-94; TAIR: AT1G21280.1 Copia-like polyprotein/retrotransposon; Swiss-Prot: sp|P10978|POLX_TOBAC Retrovirus-related Pol polyprotein from transposon TNT 1-94; TrEMBL-Plants: tr|A0A151S4H3|A0A151S4H3_CAJCA Retrovirus-related Pol polyprotein from transposon TNT 1-94; Found in the gene: LotjaGi5g1v0116200 | 5 | ||
– | Retrovirus-related Pol polyprotein from transposon TNT 1-94; TAIR: AT1G21280.1 Copia-like polyprotein/retrotransposon; Swiss-Prot: sp|P10978|POLX_TOBAC Retrovirus-related Pol polyprotein from transposon TNT 1-94; TrEMBL-Plants: tr|A0A151S4H3|A0A151S4H3_CAJCA Retrovirus-related Pol polyprotein from transposon TNT 1-94; Found in the gene: LotjaGi5g1v0116200 | 5 | ||
– | Retrovirus-related Pol polyprotein from transposon TNT 1-94; TAIR: AT1G21280.1 Copia-like polyprotein/retrotransposon; Swiss-Prot: sp|P10978|POLX_TOBAC Retrovirus-related Pol polyprotein from transposon TNT 1-94; TrEMBL-Plants: tr|A0A151S4H3|A0A151S4H3_CAJCA Retrovirus-related Pol polyprotein from transposon TNT 1-94; Found in the gene: LotjaGi5g1v0116200 | 5 | ||
– | Retrovirus-related Pol polyprotein from transposon TNT 1-94; TAIR: AT1G21280.1 Copia-like polyprotein/retrotransposon; Swiss-Prot: sp|P10978|POLX_TOBAC Retrovirus-related Pol polyprotein from transposon TNT 1-94; TrEMBL-Plants: tr|A0A151QYF6|A0A151QYF6_CAJCA Uncharacterized protein; Found in the gene: LotjaGi5g1v0126400 | 9 | ||
– | Retrovirus-related Pol polyprotein from transposon TNT 1-94; TAIR: AT1G17600.1 Disease resistance protein (TIR-NBS-LRR class) family; Swiss-Prot: sp|P10978|POLX_TOBAC Retrovirus-related Pol polyprotein from transposon TNT 1-94; TrEMBL-Plants: tr|A0A151U4X0|A0A151U4X0_CAJCA Retrovirus-related Pol polyprotein from transposon TNT 1-94; Found in the gene: LotjaGi5g1v0164500 | 5 | ||
– | Retrovirus-related Pol polyprotein from transposon TNT 1-94; TAIR: AT1G17600.1 Disease resistance protein (TIR-NBS-LRR class) family; Swiss-Prot: sp|P10978|POLX_TOBAC Retrovirus-related Pol polyprotein from transposon TNT 1-94; TrEMBL-Plants: tr|A0A151U4X0|A0A151U4X0_CAJCA Retrovirus-related Pol polyprotein from transposon TNT 1-94; Found in the gene: LotjaGi5g1v0164500 | 5 | ||
– | Retrovirus-related Pol polyprotein from transposon TNT 1-94; TAIR: AT1G17600.1 Disease resistance protein (TIR-NBS-LRR class) family; Swiss-Prot: sp|P10978|POLX_TOBAC Retrovirus-related Pol polyprotein from transposon TNT 1-94; TrEMBL-Plants: tr|A0A151U4X0|A0A151U4X0_CAJCA Retrovirus-related Pol polyprotein from transposon TNT 1-94; Found in the gene: LotjaGi5g1v0164500 | 5 | ||
– | Retrovirus-related Pol polyprotein from transposon TNT 1-94; TAIR: AT1G21280.1 Copia-like polyprotein/retrotransposon; Swiss-Prot: sp|P10978|POLX_TOBAC Retrovirus-related Pol polyprotein from transposon TNT 1-94; TrEMBL-Plants: tr|A5AVD6|A5AVD6_VITVI Putative uncharacterized protein; Found in the gene: LotjaGi5g1v0171300 | 11 | ||
– | Retrovirus-related Pol polyprotein from transposon TNT 1-94; TAIR: AT1G21280.1 Copia-like polyprotein/retrotransposon; Swiss-Prot: sp|P10978|POLX_TOBAC Retrovirus-related Pol polyprotein from transposon TNT 1-94; TrEMBL-Plants: tr|A0A061EH95|A0A061EH95_THECC Uncharacterized protein; Found in the gene: LotjaGi5g1v0171300 | 11 | ||
– | Retrovirus-related Pol polyprotein from transposon TNT 1-94; TAIR: AT1G21280.1 Copia-like polyprotein/retrotransposon; Swiss-Prot: sp|P04146|COPIA_DROME Copia protein; TrEMBL-Plants: tr|A0A151RE46|A0A151RE46_CAJCA Retrovirus-related Pol polyprotein from transposon TNT 1-94; Found in the gene: LotjaGi5g1v0296100 | 6 | ||
– | Gag-pol polyprotein; TAIR: AT1G21280.1 Copia-like polyprotein/retrotransposon; Swiss-Prot: sp|O12158|POL_HV192 Gag-Pol polyprotein; TrEMBL-Plants: tr|A0A151SZ39|A0A151SZ39_CAJCA Retrovirus-related Pol polyprotein from transposon TNT 1-94; Found in the gene: LotjaGi5g1v0321200_LC | 10 | ||
– | Retrovirus-related Pol polyprotein from transposon TNT 1-94; TAIR: AT1G21280.1 Copia-like polyprotein/retrotransposon; Swiss-Prot: sp|P10978|POLX_TOBAC Retrovirus-related Pol polyprotein from transposon TNT 1-94; TrEMBL-Plants: tr|A0A061EH95|A0A061EH95_THECC Uncharacterized protein; Found in the gene: LotjaGi6g1v0015200 | 11 | ||
– | Retrovirus-related Pol polyprotein from transposon TNT 1-94; TAIR: AT1G21280.1 Copia-like polyprotein/retrotransposon; Swiss-Prot: sp|P25601|YCH5_YEAST Putative transposon Ty5-1 protein YCL075W; TrEMBL-Plants: tr|A0A151TNK9|A0A151TNK9_CAJCA Retrovirus-related Pol polyprotein from transposon TNT 1-94; Found in the gene: LotjaGi6g1v0053100 | 7 | ||
– | Retrovirus-related Pol polyprotein from transposon TNT 1-94; TAIR: AT1G21280.1 Copia-like polyprotein/retrotransposon; Swiss-Prot: sp|P19558|GAG_BIV29 Gag polyprotein; TrEMBL-Plants: tr|A0A151QYF6|A0A151QYF6_CAJCA Uncharacterized protein; Found in the gene: LotjaGi6g1v0077700 | 7 | ||
– | Retrovirus-related Pol polyprotein from transposon TNT 1-94; TAIR: AT1G21280.1 Copia-like polyprotein/retrotransposon; Swiss-Prot: sp|Q7NI06|SYE_GLOVI Glutamate--tRNA ligase; TrEMBL-Plants: tr|A0A151RMJ4|A0A151RMJ4_CAJCA Uncharacterized protein; Found in the gene: LotjaGi6g1v0092500_LC | 4 | ||
– | Retrovirus-related Pol polyprotein from transposon TNT 1-94; TAIR: AT2G06904.1 nucleic acid / zinc ion binding protein; Swiss-Prot: sp|P10978|POLX_TOBAC Retrovirus-related Pol polyprotein from transposon TNT 1-94; TrEMBL-Plants: tr|Q2HU05|Q2HU05_MEDTR Integrase, catalytic region; Zinc finger, CCHC-type; Peptidase aspartic, catalytic; Found in the gene: LotjaGi6g1v0114200_LC | 10 | ||
– | Retrovirus-related Pol polyprotein from transposon TNT 1-94; TAIR: AT3G21000.1 Gag-Pol-related retrotransposon family protein; Swiss-Prot: sp|P10978|POLX_TOBAC Retrovirus-related Pol polyprotein from transposon TNT 1-94; TrEMBL-Plants: tr|A0A0B2R495|A0A0B2R495_GLYSO Retrovirus-related Pol polyprotein from transposon TNT 1-94; Found in the gene: LotjaGi6g1v0165000_LC | 10 | ||
– | Retrovirus-related Pol polyprotein from transposon TNT 1-94; TAIR: AT5G48050.1 Copia-like polyprotein/retrotransposon; Swiss-Prot: sp|P0CP47|PABP_CRYNB Polyadenylate-binding protein, cytoplasmic and nuclear; TrEMBL-Plants: tr|A0A151QRR0|A0A151QRR0_CAJCA Uncharacterized protein; Found in the gene: LotjaGi6g1v0166100 | 6 | ||
– | Retrovirus-related Pol polyprotein from transposon TNT 1-94; TAIR: AT1G21280.1 Copia-like polyprotein/retrotransposon; Swiss-Prot: sp|P56690|SYI_THET8 Isoleucine--tRNA ligase; TrEMBL-Plants: tr|A0A151QYF6|A0A151QYF6_CAJCA Uncharacterized protein; Found in the gene: LotjaGi6g1v0215200 | 7 | ||
– | Retrovirus-related Pol polyprotein from transposon TNT 1-94; TAIR: AT1G21280.1 Copia-like polyprotein/retrotransposon; Swiss-Prot: sp|B1Z700|TSAD_METPB tRNA N6-adenosine threonylcarbamoyltransferase; TrEMBL-Plants: tr|A0A151U9A5|A0A151U9A5_CAJCA Retrovirus-related Pol polyprotein from transposon TNT 1-94; Found in the gene: LotjaGi6g1v0242000 | 8 | ||
– | Retrovirus-related Pol polyprotein from transposon TNT 1-94; TAIR: AT5G48050.1 Copia-like polyprotein/retrotransposon; Swiss-Prot: sp|Q5ZL57|COPD_CHICK Coatomer subunit delta; TrEMBL-Plants: tr|I3T814|I3T814_LOTJA Uncharacterized protein; Found in the gene: LotjaGi6g1v0272400_LC | 5 | ||
– | Retrovirus-related Pol polyprotein from transposon TNT 1-94; TAIR: AT1G21280.1 Copia-like polyprotein/retrotransposon; Swiss-Prot: sp|P0CG32|ZCC18_HUMAN Zinc finger CCHC domain-containing protein 18; TrEMBL-Plants: tr|A0A151TMA1|A0A151TMA1_CAJCA Retrovirus-related Pol polyprotein from transposon TNT 1-94; Found in the gene: LotjaGi6g1v0321000 | 6 | ||
– | Retrovirus-related Pol polyprotein from transposon TNT 1-94; TAIR: AT1G21280.1 Copia-like polyprotein/retrotransposon; Swiss-Prot: sp|P10978|POLX_TOBAC Retrovirus-related Pol polyprotein from transposon TNT 1-94; TrEMBL-Plants: tr|A0A151QYF6|A0A151QYF6_CAJCA Uncharacterized protein; Found in the gene: LotjaGi6g1v0327800 | 6 |
A list of co-occurring predicted domains within the L. japonicus gene space:
Predicted domain | Source | Observations | Saturation (%) |
---|---|---|---|
PTHR34222:SF5 | PANTHER | 1 | 0.93 |