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PTHR34482:SF4

Source: PANTHER

Description

No description is available for this domain.

Associated GO terms

Unable to find any GO terms for the transcript with the identifier.

Associated Lotus transcripts 37

Transcript Name Description Predicted domains Domain count
LotjaGi1g1v0189900_LC.1
– Gag-Pol polyprotein; TAIR: AT2G37340.1 arginine/serine-rich zinc knuckle-containing protein 33; Swiss-Prot: sp|P12450|GAG_HV2SB Gag polyprotein; TrEMBL-Plants: tr|Q949K8|Q949K8_CICAR Gag polyprotein; Found in the gene: LotjaGi1g1v0189900_LC
Domains
12
LotjaGi1g1v0204400_LC.1
– Gag-Pol polyprotein; TAIR: AT3G43490.1 Zinc knuckle (CCHC-type) family protein; Swiss-Prot: sp|P03354|POL_RSVP Gag-Pro-Pol polyprotein; TrEMBL-Plants: tr|Q949K8|Q949K8_CICAR Gag polyprotein; Found in the gene: LotjaGi1g1v0204400_LC
Domains
17
LotjaGi1g1v0209100_LC.1
– Transposon Ty3-I Gag-Pol polyprotein; TAIR: AT1G34070.1 Copia-like polyprotein/retrotransposon; Swiss-Prot: sp|Q92SW3|RBFA_RHIME Ribosome-binding factor A; TrEMBL-Plants: tr|Q949K8|Q949K8_CICAR Gag polyprotein; Found in the gene: LotjaGi1g1v0209100_LC
Domains
4
LotjaGi1g1v0221700_LC.1
– Transposon Ty3-I Gag-Pol polyprotein; TAIR: AT4G25434.1 nudix hydrolase homolog 10; Swiss-Prot: sp|Q5ZK62|ACAP2_CHICK Arf-GAP with coiled-coil, ANK repeat and PH domain-containing protein 2; TrEMBL-Plants: tr|Q2HW87|Q2HW87_MEDTR RNA-directed DNA polymerase (Reverse transcriptase); Zinc finger, CCHC-type; Peptidase aspartic, active site; Retrotransposon gag protein; Found in the gene: LotjaGi1g1v0221700_LC
Domains
5
LotjaGi1g1v0388800_LC.1
– Gag-Pol polyprotein; TAIR: AT4G36020.1 cold shock domain protein 1; Swiss-Prot: sp|P53849|GIS2_YEAST Zinc finger protein GIS2; TrEMBL-Plants: tr|Q2HW87|Q2HW87_MEDTR RNA-directed DNA polymerase (Reverse transcriptase); Zinc finger, CCHC-type; Peptidase aspartic, active site; Retrotransposon gag protein; Found in the gene: LotjaGi1g1v0388800_LC
Domains
17
LotjaGi1g1v0532800_LC.1
– Gag-Pol polyprotein; TAIR: AT2G15180.1 Zinc knuckle (CCHC-type) family protein; Swiss-Prot: sp|P03354|POL_RSVP Gag-Pro-Pol polyprotein; TrEMBL-Plants: tr|Q949K8|Q949K8_CICAR Gag polyprotein; Found in the gene: LotjaGi1g1v0532800_LC
Domains
19
LotjaGi2g1v0009900_LC.1
– Retrotransposon protein, putative, Ty3-gypsy subclass; TAIR: AT3G21450.1 Protein kinase superfamily protein; Swiss-Prot: sp|Q7ZUC7|PGES2_DANRE Prostaglandin E synthase 2; TrEMBL-Plants: tr|Q949K8|Q949K8_CICAR Gag polyprotein; Found in the gene: LotjaGi2g1v0009900_LC
Domains
5
LotjaGi2g1v0013600_LC.1
– Gag-Pol polyprotein; TAIR: AT4G36020.1 cold shock domain protein 1; Swiss-Prot: sp|P53849|GIS2_YEAST Zinc finger protein GIS2; TrEMBL-Plants: tr|Q2HW87|Q2HW87_MEDTR RNA-directed DNA polymerase (Reverse transcriptase); Zinc finger, CCHC-type; Peptidase aspartic, active site; Retrotransposon gag protein; Found in the gene: LotjaGi2g1v0013600_LC
Domains
21
LotjaGi2g1v0020100_LC.1
– Gag-Pol polyprotein; TAIR: AT3G42860.1 zinc knuckle (CCHC-type) family protein; Swiss-Prot: sp|P53849|GIS2_YEAST Zinc finger protein GIS2; TrEMBL-Plants: tr|Q2HW87|Q2HW87_MEDTR RNA-directed DNA polymerase (Reverse transcriptase); Zinc finger, CCHC-type; Peptidase aspartic, active site; Retrotransposon gag protein; Found in the gene: LotjaGi2g1v0020100_LC
Domains
16
LotjaGi2g1v0106400_LC.1
– Gag-Pol polyprotein; TAIR: AT4G36020.1 cold shock domain protein 1; Swiss-Prot: sp|P53849|GIS2_YEAST Zinc finger protein GIS2; TrEMBL-Plants: tr|Q2HW87|Q2HW87_MEDTR RNA-directed DNA polymerase (Reverse transcriptase); Zinc finger, CCHC-type; Peptidase aspartic, active site; Retrotransposon gag protein; Found in the gene: LotjaGi2g1v0106400_LC
Domains
17
LotjaGi2g1v0106400_LC.3
– Gag-Pol polyprotein; TAIR: AT4G36020.1 cold shock domain protein 1; Swiss-Prot: sp|P53849|GIS2_YEAST Zinc finger protein GIS2; TrEMBL-Plants: tr|Q2HW87|Q2HW87_MEDTR RNA-directed DNA polymerase (Reverse transcriptase); Zinc finger, CCHC-type; Peptidase aspartic, active site; Retrotransposon gag protein; Found in the gene: LotjaGi2g1v0106400_LC
Domains
17
LotjaGi2g1v0107800_LC.1
– Ty3/Gypsy polyprotein/retrotransposon, putative; TAIR: AT3G18050.1 GPI-anchored protein; Swiss-Prot: sp|Q4FP37|ATPG_PELUB ATP synthase gamma chain; TrEMBL-Plants: tr|Q949K8|Q949K8_CICAR Gag polyprotein; Found in the gene: LotjaGi2g1v0107800_LC
Domains
5
LotjaGi2g1v0110300_LC.1
– Gag-Pol polyprotein; TAIR: AT4G36020.2 cold shock domain protein 1; Swiss-Prot: sp|P05895|POL_SIVVT Gag-Pol polyprotein; TrEMBL-Plants: tr|Q949L4|Q949L4_CICAR Putative polyprotein; Found in the gene: LotjaGi2g1v0110300_LC
Domains
13
LotjaGi2g1v0112600_LC.1
– Gag-Pol polyprotein; TAIR: AT3G43590.1 zinc knuckle (CCHC-type) family protein; Swiss-Prot: sp|P53996|CNBP_MOUSE Cellular nucleic acid-binding protein; TrEMBL-Plants: tr|A0A1B5Z7X4|A0A1B5Z7X4_TRISU Uncharacterized protein; Found in the gene: LotjaGi2g1v0112600_LC
Domains
12
LotjaGi3g1v0258300_LC.1
– Gag-Pol polyprotein; TAIR: AT3G42860.1 zinc knuckle (CCHC-type) family protein; Swiss-Prot: sp|P53849|GIS2_YEAST Zinc finger protein GIS2; TrEMBL-Plants: tr|Q2HW87|Q2HW87_MEDTR RNA-directed DNA polymerase (Reverse transcriptase); Zinc finger, CCHC-type; Peptidase aspartic, active site; Retrotransposon gag protein; Found in the gene: LotjaGi3g1v0258300_LC
Domains
17
LotjaGi3g1v0264400.1
– Gag-Pol polyprotein; TAIR: AT3G42860.1 zinc knuckle (CCHC-type) family protein; Swiss-Prot: sp|Q1A249|POL_SIVEK Gag-Pol polyprotein; TrEMBL-Plants: tr|Q949K8|Q949K8_CICAR Gag polyprotein; Found in the gene: LotjaGi3g1v0264400
Domains
12
LotjaGi3g1v0306900_LC.1
– Gag-Pol polyprotein; TAIR: AT3G43490.1 Zinc knuckle (CCHC-type) family protein; Swiss-Prot: sp|P03354|POL_RSVP Gag-Pro-Pol polyprotein; TrEMBL-Plants: tr|Q949K8|Q949K8_CICAR Gag polyprotein; Found in the gene: LotjaGi3g1v0306900_LC
Domains
12
LotjaGi3g1v0307200_LC.4
– Gag-Pol polyprotein; TAIR: AT1G75560.1 zinc knuckle (CCHC-type) family protein; Swiss-Prot: sp|O91080|POL_HV1YF Gag-Pol polyprotein; TrEMBL-Plants: tr|A0A151RID1|A0A151RID1_CAJCA Transposon Ty3-G Gag-Pol polyprotein; Found in the gene: LotjaGi3g1v0307200_LC
Domains
13
LotjaGi4g1v0105300_LC.1
– Transposon Ty3-I Gag-Pol polyprotein; TAIR: AT3G10400.1 RNA recognition motif and CCHC-type zinc finger domains containing protein; Swiss-Prot: sp|P34689|GLH1_CAEEL ATP-dependent RNA helicase glh-1; TrEMBL-Plants: tr|A0A1B5Z9J1|A0A1B5Z9J1_TRISU Uncharacterized protein; Found in the gene: LotjaGi4g1v0105300_LC
Domains
12
LotjaGi4g1v0141100_LC.1
– Transposon Ty3-I Gag-Pol polyprotein; TAIR: AT3G57570.2 ARM repeat superfamily protein; Swiss-Prot: sp|A1CNW8|SSH4_ASPCL Protein ssh4; TrEMBL-Plants: tr|Q949K8|Q949K8_CICAR Gag polyprotein; Found in the gene: LotjaGi4g1v0141100_LC
Domains
5
LotjaGi4g1v0145000_LC.1
– Gag-Pol polyprotein; TAIR: AT3G43590.1 zinc knuckle (CCHC-type) family protein; Swiss-Prot: sp|O76743|GLH4_CAEEL ATP-dependent RNA helicase glh-4; TrEMBL-Plants: tr|A0A1B5Z7X4|A0A1B5Z7X4_TRISU Uncharacterized protein; Found in the gene: LotjaGi4g1v0145000_LC
Domains
12
LotjaGi4g1v0187300.1
– Transposon Ty3-I Gag-Pol polyprotein; TAIR: AT1G48520.1 GLU-ADT subunit B; Swiss-Prot: sp|Q9RZE7|PARB2_DEIRA Probable chromosome 2-partitioning protein ParB; TrEMBL-Plants: tr|Q949K8|Q949K8_CICAR Gag polyprotein; Found in the gene: LotjaGi4g1v0187300
Domains
4
LotjaGi5g1v0114200_LC.1
– Gag-Pol polyprotein; TAIR: AT3G42860.1 zinc knuckle (CCHC-type) family protein; Swiss-Prot: sp|Q04832|HEXP_LEIMA DNA-binding protein HEXBP; TrEMBL-Plants: tr|A0A1B5Z7X4|A0A1B5Z7X4_TRISU Uncharacterized protein; Found in the gene: LotjaGi5g1v0114200_LC
Domains
15
LotjaGi5g1v0124300_LC.1
– Gag-Pol polyprotein; TAIR: AT3G53500.2 RNA-binding (RRM/RBD/RNP motifs) family protein with retrovirus zinc finger-like domain-containing protein; Swiss-Prot: sp|P05895|POL_SIVVT Gag-Pol polyprotein; TrEMBL-Plants: tr|Q949K8|Q949K8_CICAR Gag polyprotein; Found in the gene: LotjaGi5g1v0124300_LC
Domains
12
LotjaGi5g1v0127200_LC.1
– Gag-Pol polyprotein; TAIR: AT4G36020.1 cold shock domain protein 1; Swiss-Prot: sp|P31821|GAG_FIVT2 Gag polyprotein; TrEMBL-Plants: tr|Q949K8|Q949K8_CICAR Gag polyprotein; Found in the gene: LotjaGi5g1v0127200_LC
Domains
13
LotjaGi6g1v0027100_LC.1
– Gag-Pol polyprotein; TAIR: AT3G53500.2 RNA-binding (RRM/RBD/RNP motifs) family protein with retrovirus zinc finger-like domain-containing protein; Swiss-Prot: sp|P53849|GIS2_YEAST Zinc finger protein GIS2; TrEMBL-Plants: tr|Q2HW87|Q2HW87_MEDTR RNA-directed DNA polymerase (Reverse transcriptase); Zinc finger, CCHC-type; Peptidase aspartic, active site; Retrotransposon gag protein; Found in the gene: LotjaGi6g1v0027100_LC
Domains
12
LotjaGi6g1v0094100.1
– Transposon Ty3-I Gag-Pol polyprotein; TAIR: AT5G48050.1 Copia-like polyprotein/retrotransposon; Swiss-Prot: sp|Q9QJT6|GLYCO_SHRV Glycoprotein; TrEMBL-Plants: tr|Q949K8|Q949K8_CICAR Gag polyprotein; Found in the gene: LotjaGi6g1v0094100
Domains
4
LotjaGi6g1v0111200_LC.1
– Transposon Ty3-I Gag-Pol polyprotein; TAIR: AT2G18450.1 succinate dehydrogenase 1-2; Swiss-Prot: sp|Q05979|KYNU_YEAST Kynureninase; TrEMBL-Plants: tr|Q949K8|Q949K8_CICAR Gag polyprotein; Found in the gene: LotjaGi6g1v0111200_LC
Domains
4
LotjaGi6g1v0113700_LC.1
– Gag-Pol polyprotein; TAIR: AT2G37340.1 arginine/serine-rich zinc knuckle-containing protein 33; Swiss-Prot: sp|Q7TN75|PEG10_MOUSE Retrotransposon-derived protein PEG10; TrEMBL-Plants: tr|A0A151QTG4|A0A151QTG4_CAJCA Retrotransposable element Tf2; Found in the gene: LotjaGi6g1v0113700_LC
Domains
12
LotjaGi6g1v0113700_LC.2
– Gag-Pol polyprotein; TAIR: AT2G37340.1 arginine/serine-rich zinc knuckle-containing protein 33; Swiss-Prot: sp|Q7TN75|PEG10_MOUSE Retrotransposon-derived protein PEG10; TrEMBL-Plants: tr|A0A151QTG4|A0A151QTG4_CAJCA Retrotransposable element Tf2; Found in the gene: LotjaGi6g1v0113700_LC
Domains
12
LotjaGi6g1v0130600_LC.1
– Gag-Pol polyprotein; TAIR: AT2G37340.1 arginine/serine-rich zinc knuckle-containing protein 33; Swiss-Prot: sp|P34689|GLH1_CAEEL ATP-dependent RNA helicase glh-1; TrEMBL-Plants: tr|A0A151QTG4|A0A151QTG4_CAJCA Retrotransposable element Tf2; Found in the gene: LotjaGi6g1v0130600_LC
Domains
12
LotjaGi6g1v0140900_LC.1
– Ty3/Gypsy polyprotein/retrotransposon, putative; TAIR: AT3G10400.1 RNA recognition motif and CCHC-type zinc finger domains containing protein; Swiss-Prot: sp|P03543|CAPSD_CAMVC Capsid protein; TrEMBL-Plants: tr|A0A0B2QJ02|A0A0B2QJ02_GLYSO Uncharacterized protein; Found in the gene: LotjaGi6g1v0140900_LC
Domains
11
LotjaGi6g1v0140900_LC.2
– Ty3/Gypsy polyprotein/retrotransposon, putative; TAIR: AT3G44713.1 hypothetical protein; Swiss-Prot: sp|Q5DTT4|RGAG4_MOUSE Retrotransposon gag domain-containing protein 4; TrEMBL-Plants: tr|A0A0B2NXJ3|A0A0B2NXJ3_GLYSO Ubiquitin carboxyl-terminal hydrolase 12; Found in the gene: LotjaGi6g1v0140900_LC
Domains
4
LotjaGi6g1v0182500_LC.1
– Transposon Ty3-G Gag-Pol polyprotein; TAIR: AT1G75560.1 zinc knuckle (CCHC-type) family protein; Swiss-Prot: sp|P16900|GAG_OMVVS Gag polyprotein; TrEMBL-Plants: tr|A0A151RID1|A0A151RID1_CAJCA Transposon Ty3-G Gag-Pol polyprotein; Found in the gene: LotjaGi6g1v0182500_LC
Domains
17
LotjaGi6g1v0185800_LC.1
– Gag-Pol polyprotein; TAIR: AT3G43590.1 zinc knuckle (CCHC-type) family protein; Swiss-Prot: sp|Q65XV7|RFA1C_ORYSJ Replication protein A 70 kDa DNA-binding subunit C; TrEMBL-Plants: tr|A0A151RID1|A0A151RID1_CAJCA Transposon Ty3-G Gag-Pol polyprotein; Found in the gene: LotjaGi6g1v0185800_LC
Domains
13
LotjaGi6g1v0214100_LC.2
– Gag-Pol polyprotein; TAIR: AT1G75560.1 zinc knuckle (CCHC-type) family protein; Swiss-Prot: sp|O91080|POL_HV1YF Gag-Pol polyprotein; TrEMBL-Plants: tr|A0A151RID1|A0A151RID1_CAJCA Transposon Ty3-G Gag-Pol polyprotein; Found in the gene: LotjaGi6g1v0214100_LC
Domains
14
LotjaGi6g1v0214100_LC.8
– Gag-Pol polyprotein; TAIR: AT3G43590.1 zinc knuckle (CCHC-type) family protein; Swiss-Prot: sp|O91080|POL_HV1YF Gag-Pol polyprotein; TrEMBL-Plants: tr|A0A151RID1|A0A151RID1_CAJCA Transposon Ty3-G Gag-Pol polyprotein; Found in the gene: LotjaGi6g1v0214100_LC
Domains
14

Co-occuring domains 1

A list of co-occurring predicted domains within the L. japonicus gene space:

Predicted domain Source Observations Saturation (%)
mobidb-lite MobiDBLite 1 2.70