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Transcript | Name | Description | Predicted domains | Domain count |
---|---|---|---|---|
– | Retrovirus-related Pol polyprotein from transposon 297 family; TAIR: AT3G01410.1 Polynucleotidyl transferase, ribonuclease H-like superfamily protein; Swiss-Prot: sp|P9WLH4|Y2228_MYCTO Uncharacterized protein MT2287; TrEMBL-Plants: tr|A0A1B5Z7K1|A0A1B5Z7K1_TRISU Uncharacterized protein; Found in the gene: LotjaGi1g1v0156100_LC | 9 | ||
– | Pol polyprotein; TAIR: AT3G01410.1 Polynucleotidyl transferase, ribonuclease H-like superfamily protein; Swiss-Prot: sp|P23074|POL_SFV1 Pro-Pol polyprotein; TrEMBL-Plants: tr|A0A151U9S6|A0A151U9S6_CAJCA Retrovirus-related Pol polyprotein from transposon 17.6; Found in the gene: LotjaGi1g1v0168900_LC | 16 | ||
– | Retrovirus-related Pol polyprotein from transposon 297 family; TAIR: AT3G01410.1 Polynucleotidyl transferase, ribonuclease H-like superfamily protein; Swiss-Prot: sp|Q9HSF6|RNH_HALSA Ribonuclease HI; TrEMBL-Plants: tr|A0A151SDS5|A0A151SDS5_CAJCA Pol polyprotein; Found in the gene: LotjaGi1g1v0199200_LC | 12 | ||
– | Retrovirus-related Pol polyprotein from transposon 297 family; TAIR: AT3G01410.1 Polynucleotidyl transferase, ribonuclease H-like superfamily protein; Swiss-Prot: sp|Q9HSF6|RNH_HALSA Ribonuclease HI; TrEMBL-Plants: tr|A0A1B5Z9G1|A0A1B5Z9G1_TRISU Uncharacterized protein; Found in the gene: LotjaGi1g1v0221000_LC | 9 | ||
– | Retrovirus-related Pol polyprotein from transposon 297 family; TAIR: AT1G24090.1 RNase H family protein; Swiss-Prot: sp|Q9HSF6|RNH_HALSA Ribonuclease HI; TrEMBL-Plants: tr|A0A1B5Z9G1|A0A1B5Z9G1_TRISU Uncharacterized protein; Found in the gene: LotjaGi1g1v0755900_LC | 9 | ||
– | Retrovirus-related Pol polyprotein from transposon 297 family; TAIR: AT1G24090.1 RNase H family protein; Swiss-Prot: sp|F9VN79|RNH_SULTO Ribonuclease HI; TrEMBL-Plants: tr|A0A1B5Z931|A0A1B5Z931_TRISU Uncharacterized protein; Found in the gene: LotjaGi1g1v0775100_LC | 7 | ||
– | Retrovirus-related Pol polyprotein from transposon 297 family; TAIR: AT3G01410.1 Polynucleotidyl transferase, ribonuclease H-like superfamily protein; Swiss-Prot: sp|P9WLH4|Y2228_MYCTO Uncharacterized protein MT2287; TrEMBL-Plants: tr|A0A1B5Z9G1|A0A1B5Z9G1_TRISU Uncharacterized protein; Found in the gene: LotjaGi2g1v0010600_LC | 9 | ||
– | Retrovirus-related Pol polyprotein from transposon 17.6; TAIR: AT3G01410.1 Polynucleotidyl transferase, ribonuclease H-like superfamily protein; Swiss-Prot: sp|P04323|POL3_DROME Retrovirus-related Pol polyprotein from transposon 17.6; TrEMBL-Plants: tr|A0A151TQT4|A0A151TQT4_CAJCA Retrovirus-related Pol polyprotein from transposon 17.6; Found in the gene: LotjaGi2g1v0057800_LC | 17 | ||
– | Retrovirus-related Pol polyprotein from transposon 297 family; TAIR: AT3G01410.1 Polynucleotidyl transferase, ribonuclease H-like superfamily protein; Swiss-Prot: sp|P9WLH4|Y2228_MYCTO Uncharacterized protein MT2287; TrEMBL-Plants: tr|A0A1B5Z7K1|A0A1B5Z7K1_TRISU Uncharacterized protein; Found in the gene: LotjaGi2g1v0079400_LC | 9 | ||
– | Ribonuclease H; TAIR: AT5G42965.1 Polynucleotidyl transferase, ribonuclease H-like superfamily protein; Swiss-Prot: sp|P0C2F6|RNHX1_ARATH Putative ribonuclease H protein At1g65750; TrEMBL-Plants: tr|A0A061FT33|A0A061FT33_THECC Uncharacterized protein; Found in the gene: LotjaGi2g1v0163100_LC | 10 | ||
– | Pol polyprotein; TAIR: AT3G01410.1 Polynucleotidyl transferase, ribonuclease H-like superfamily protein; Swiss-Prot: sp|P23074|POL_SFV1 Pro-Pol polyprotein; TrEMBL-Plants: tr|A0A151U9S6|A0A151U9S6_CAJCA Retrovirus-related Pol polyprotein from transposon 17.6; Found in the gene: LotjaGi2g1v0208700_LC | 21 | ||
– | Retrovirus-related Pol polyprotein from transposon 297 family; TAIR: AT1G24090.1 RNase H family protein; Swiss-Prot: sp|Q9HSF6|RNH_HALSA Ribonuclease HI; TrEMBL-Plants: tr|A0A151SC61|A0A151SC61_CAJCA Retrovirus-related Pol polyprotein from transposon 17.6; Found in the gene: LotjaGi2g1v0232200_LC | 12 | ||
– | Ribonuclease H; TAIR: AT3G01410.1 Polynucleotidyl transferase, ribonuclease H-like superfamily protein; Swiss-Prot: sp|P9WLH4|Y2228_MYCTO Uncharacterized protein MT2287; TrEMBL-Plants: tr|A0A0B2Q0J9|A0A0B2Q0J9_GLYSO Uncharacterized protein; Found in the gene: LotjaGi2g1v0250200 | 10 | ||
– | Ribonuclease H; TAIR: AT3G01410.1 Polynucleotidyl transferase, ribonuclease H-like superfamily protein; Swiss-Prot: sp|P9WLH4|Y2228_MYCTO Uncharacterized protein MT2287; TrEMBL-Plants: tr|A0A0B2Q0J9|A0A0B2Q0J9_GLYSO Uncharacterized protein; Found in the gene: LotjaGi2g1v0250200 | 10 | ||
– | Ribonuclease H; TAIR: AT3G01410.1 Polynucleotidyl transferase, ribonuclease H-like superfamily protein; Swiss-Prot: sp|P9WLH4|Y2228_MYCTO Uncharacterized protein MT2287; TrEMBL-Plants: tr|I3RZ82|I3RZ82_LOTJA Uncharacterized protein; Found in the gene: LotjaGi2g1v0250300_LC | 11 | ||
– | Ribonuclease H; TAIR: AT3G01410.1 Polynucleotidyl transferase, ribonuclease H-like superfamily protein; Swiss-Prot: sp|P9WLH4|Y2228_MYCTO Uncharacterized protein MT2287; TrEMBL-Plants: tr|I3SU92|I3SU92_LOTJA Uncharacterized protein; Found in the gene: LotjaGi2g1v0250400 | 10 | ||
– | Retrovirus-related Pol polyprotein from transposon 17.6; TAIR: AT5G46150.1 LEM3 (ligand-effect modulator 3) family protein / CDC50 family protein; Swiss-Prot: sp|Q8I7P9|POL5_DROME Retrovirus-related Pol polyprotein from transposon opus; TrEMBL-Plants: tr|A0A151SMQ4|A0A151SMQ4_CAJCA Retrovirus-related Pol polyprotein from transposon 17.6; Found in the gene: LotjaGi3g1v0220000_LC | 7 | ||
– | Retrotransposon protein, putative, Ty3-gypsy subclass; TAIR: AT1G24090.1 RNase H family protein; Swiss-Prot: sp|Q9HSF6|RNH_HALSA Ribonuclease HI; TrEMBL-Plants: tr|A0A151RKF1|A0A151RKF1_CAJCA Pro-Pol polyprotein; Found in the gene: LotjaGi3g1v0239900_LC | 8 | ||
– | Retrovirus-related Pol polyprotein from transposon 297 family; TAIR: AT3G01410.1 Polynucleotidyl transferase, ribonuclease H-like superfamily protein; Swiss-Prot: sp|P9WLH4|Y2228_MYCTO Uncharacterized protein MT2287; TrEMBL-Plants: tr|A0A151RP08|A0A151RP08_CAJCA Retrovirus-related Pol polyprotein from transposon 17.6; Found in the gene: LotjaGi3g1v0250200_LC | 18 | ||
– | Retrovirus-related Pol polyprotein from transposon 297 family; TAIR: AT1G24090.1 RNase H family protein; Swiss-Prot: sp|Q8I7P9|POL5_DROME Retrovirus-related Pol polyprotein from transposon opus; TrEMBL-Plants: tr|A0A151TQT4|A0A151TQT4_CAJCA Retrovirus-related Pol polyprotein from transposon 17.6; Found in the gene: LotjaGi3g1v0276000_LC | 16 | ||
– | Retrovirus-related Pol polyprotein from transposon 297 family; TAIR: AT3G01410.1 Polynucleotidyl transferase, ribonuclease H-like superfamily protein; Swiss-Prot: sp|Q9HSF6|RNH_HALSA Ribonuclease HI; TrEMBL-Plants: tr|A0A151RP08|A0A151RP08_CAJCA Retrovirus-related Pol polyprotein from transposon 17.6; Found in the gene: LotjaGi3g1v0418300_LC | 9 | ||
– | Ribonuclease H; TAIR: AT1G24090.1 RNase H family protein; Swiss-Prot: sp|P9WLH4|Y2228_MYCTO Uncharacterized protein MT2287; TrEMBL-Plants: tr|V7C8T8|V7C8T8_PHAVU Uncharacterized protein; Found in the gene: LotjaGi4g1v0161500 | 10 | ||
– | Ribonuclease H; TAIR: AT1G24090.1 RNase H family protein; Swiss-Prot: sp|P9WLH4|Y2228_MYCTO Uncharacterized protein MT2287; TrEMBL-Plants: tr|A0A0R0FBC1|A0A0R0FBC1_SOYBN Uncharacterized protein; Found in the gene: LotjaGi4g1v0161500 | 10 | ||
– | Ribonuclease H; TAIR: AT1G24090.1 RNase H family protein; Swiss-Prot: sp|P9WLH4|Y2228_MYCTO Uncharacterized protein MT2287; TrEMBL-Plants: tr|V7C8T8|V7C8T8_PHAVU Uncharacterized protein; Found in the gene: LotjaGi4g1v0161500 | 10 | ||
– | Retrovirus-related Pol polyprotein from transposon 297 family; Swiss-Prot: sp|Q8I7P9|POL5_DROME Retrovirus-related Pol polyprotein from transposon opus; TrEMBL-Plants: tr|A0A151UAA1|A0A151UAA1_CAJCA Retrovirus-related Pol polyprotein from transposon 17.6; Found in the gene: LotjaGi4g1v0191400_LC | 7 | ||
– | Retrovirus-related Pol polyprotein from transposon 297 family; TAIR: AT3G01410.1 Polynucleotidyl transferase, ribonuclease H-like superfamily protein; Swiss-Prot: sp|Q9HSF6|RNH_HALSA Ribonuclease HI; TrEMBL-Plants: tr|A0A151RP08|A0A151RP08_CAJCA Retrovirus-related Pol polyprotein from transposon 17.6; Found in the gene: LotjaGi5g1v0037200_LC | 10 | ||
– | Retrovirus-related Pol polyprotein from transposon 297 family; TAIR: AT3G01410.1 Polynucleotidyl transferase, ribonuclease H-like superfamily protein; Swiss-Prot: sp|Q9HSF6|RNH_HALSA Ribonuclease HI; TrEMBL-Plants: tr|A0A151RP08|A0A151RP08_CAJCA Retrovirus-related Pol polyprotein from transposon 17.6; Found in the gene: LotjaGi5g1v0134100_LC | 10 | ||
– | Retrovirus-related Pol polyprotein from transposon 297 family; TAIR: AT3G01410.1 Polynucleotidyl transferase, ribonuclease H-like superfamily protein; Swiss-Prot: sp|P9WLH4|Y2228_MYCTO Uncharacterized protein MT2287; TrEMBL-Plants: tr|A0A1B5Z931|A0A1B5Z931_TRISU Uncharacterized protein; Found in the gene: LotjaGi5g1v0230800_LC | 9 | ||
– | Retrovirus-related Pol polyprotein from transposon 297 family; TAIR: AT3G01410.1 Polynucleotidyl transferase, ribonuclease H-like superfamily protein; Swiss-Prot: sp|P9WLH4|Y2228_MYCTO Uncharacterized protein MT2287; TrEMBL-Plants: tr|A0A1B5Z7G0|A0A1B5Z7G0_TRISU Uncharacterized protein; Found in the gene: LotjaGi5g1v0231000_LC | 9 | ||
– | Retrovirus-related Pol polyprotein from transposon 297 family; TAIR: AT3G01410.1 Polynucleotidyl transferase, ribonuclease H-like superfamily protein; Swiss-Prot: sp|Q9HSF6|RNH_HALSA Ribonuclease HI; TrEMBL-Plants: tr|A0A151U9S6|A0A151U9S6_CAJCA Retrovirus-related Pol polyprotein from transposon 17.6; Found in the gene: LotjaGi6g1v0151700_LC | 20 | ||
– | Retrovirus-related Pol polyprotein from transposon 17.6; TAIR: ATMG00860.1 DNA/RNA polymerases superfamily protein (ChrM); Swiss-Prot: sp|P04323|POL3_DROME Retrovirus-related Pol polyprotein from transposon 17.6; TrEMBL-Plants: tr|A0A151U9S6|A0A151U9S6_CAJCA Retrovirus-related Pol polyprotein from transposon 17.6; Found in the gene: LotjaGi6g1v0193900_LC | 9 |
A list of co-occurring predicted domains within the L. japonicus gene space:
Predicted domain | Source | Observations | Saturation (%) |
---|---|---|---|
SSF56672 | SUPERFAMILY | 1 | 3.23 |