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cd09279

Description

RNase_HI_like

Associated GO terms

Unable to find any GO terms for the transcript with the identifier.

Associated Lotus transcripts 38

Transcript Name Description Predicted domains Domain count
PREDICTED: protein NYNRIN-like, partial [Cicer arietinum] gi|502174067|ref|XP_004515428.1| 9
RNase H domain-containing protein [Arabidopsis thaliana] gi|334182806|ref|NP_173819.2| 11
RNase H domain-containing protein [Arabidopsis thaliana] gi|334182806|ref|NP_173819.2| 11
RNase H domain-containing protein [Arabidopsis thaliana] gi|334182806|ref|NP_173819.2| 11
PREDICTED: protein NYNRIN-like, partial [Cicer arietinum] gi|502174067|ref|XP_004515428.1| 9
Retrotransposon protein Ty3-gypsy subclass [Zea mays] gi|195627916|gb|ACG35788.1| 9
Retrotransposon protein Ty3-gypsy subclass [Zea mays] gi|195627916|gb|ACG35788.1| 9
Retrotransposon protein Ty3-gypsy subclass [Zea mays] gi|195627916|gb|ACG35788.1| 9
PREDICTED: ribonuclease HI-like [Fragaria vesca subsp]. vesca] gi|470139653|ref|XP_004305561.1| 10
PREDICTED: ribonuclease HI-like [Fragaria vesca subsp]. vesca] gi|470139653|ref|XP_004305561.1| 9
Retrovirus-related Pol polyprotein from transposon 297 family; TAIR: AT3G01410.1 Polynucleotidyl transferase, ribonuclease H-like superfamily protein; Swiss-Prot: sp|P9WLH4|Y2228_MYCTO Uncharacterized protein MT2287; TrEMBL-Plants: tr|A0A1B5Z7K1|A0A1B5Z7K1_TRISU Uncharacterized protein; Found in the gene: LotjaGi1g1v0156100_LC 9
Pol polyprotein; TAIR: AT3G01410.1 Polynucleotidyl transferase, ribonuclease H-like superfamily protein; Swiss-Prot: sp|P23074|POL_SFV1 Pro-Pol polyprotein; TrEMBL-Plants: tr|A0A151U9S6|A0A151U9S6_CAJCA Retrovirus-related Pol polyprotein from transposon 17.6; Found in the gene: LotjaGi1g1v0168900_LC 16
Retrovirus-related Pol polyprotein from transposon 297 family; TAIR: AT3G01410.1 Polynucleotidyl transferase, ribonuclease H-like superfamily protein; Swiss-Prot: sp|Q9HSF6|RNH_HALSA Ribonuclease HI; TrEMBL-Plants: tr|A0A151SDS5|A0A151SDS5_CAJCA Pol polyprotein; Found in the gene: LotjaGi1g1v0199200_LC 12
Retrovirus-related Pol polyprotein from transposon 297 family; TAIR: AT3G01410.1 Polynucleotidyl transferase, ribonuclease H-like superfamily protein; Swiss-Prot: sp|Q9HSF6|RNH_HALSA Ribonuclease HI; TrEMBL-Plants: tr|A0A1B5Z9G1|A0A1B5Z9G1_TRISU Uncharacterized protein; Found in the gene: LotjaGi1g1v0221000_LC 9
Pol polyprotein; TAIR: AT1G24090.1 RNase H family protein; Swiss-Prot: sp|P0CT41|TF212_SCHPO Transposon Tf2-12 polyprotein; TrEMBL-Plants: tr|A0A151SC61|A0A151SC61_CAJCA Retrovirus-related Pol polyprotein from transposon 17.6; Found in the gene: LotjaGi1g1v0548500_LC 21
Retrovirus-related Pol polyprotein from transposon 297 family; TAIR: AT1G24090.1 RNase H family protein; Swiss-Prot: sp|Q9HSF6|RNH_HALSA Ribonuclease HI; TrEMBL-Plants: tr|A0A1B5Z9G1|A0A1B5Z9G1_TRISU Uncharacterized protein; Found in the gene: LotjaGi1g1v0755900_LC 9
Retrovirus-related Pol polyprotein from transposon 297 family; TAIR: AT3G01410.1 Polynucleotidyl transferase, ribonuclease H-like superfamily protein; Swiss-Prot: sp|P9WLH4|Y2228_MYCTO Uncharacterized protein MT2287; TrEMBL-Plants: tr|A0A1B5Z9G1|A0A1B5Z9G1_TRISU Uncharacterized protein; Found in the gene: LotjaGi2g1v0010600_LC 9
Retrovirus-related Pol polyprotein from transposon 17.6; TAIR: AT3G01410.1 Polynucleotidyl transferase, ribonuclease H-like superfamily protein; Swiss-Prot: sp|P04323|POL3_DROME Retrovirus-related Pol polyprotein from transposon 17.6; TrEMBL-Plants: tr|A0A151TQT4|A0A151TQT4_CAJCA Retrovirus-related Pol polyprotein from transposon 17.6; Found in the gene: LotjaGi2g1v0057800_LC 17
Retrovirus-related Pol polyprotein from transposon 297 family; TAIR: AT3G01410.1 Polynucleotidyl transferase, ribonuclease H-like superfamily protein; Swiss-Prot: sp|P9WLH4|Y2228_MYCTO Uncharacterized protein MT2287; TrEMBL-Plants: tr|A0A1B5Z7K1|A0A1B5Z7K1_TRISU Uncharacterized protein; Found in the gene: LotjaGi2g1v0079400_LC 9
Pol polyprotein; TAIR: AT3G01410.1 Polynucleotidyl transferase, ribonuclease H-like superfamily protein; Swiss-Prot: sp|P23074|POL_SFV1 Pro-Pol polyprotein; TrEMBL-Plants: tr|A0A151U9S6|A0A151U9S6_CAJCA Retrovirus-related Pol polyprotein from transposon 17.6; Found in the gene: LotjaGi2g1v0208700_LC 21
Retrovirus-related Pol polyprotein from transposon 297 family; TAIR: AT1G24090.1 RNase H family protein; Swiss-Prot: sp|Q9HSF6|RNH_HALSA Ribonuclease HI; TrEMBL-Plants: tr|A0A151SC61|A0A151SC61_CAJCA Retrovirus-related Pol polyprotein from transposon 17.6; Found in the gene: LotjaGi2g1v0232200_LC 12
Ribonuclease H; TAIR: AT3G01410.1 Polynucleotidyl transferase, ribonuclease H-like superfamily protein; Swiss-Prot: sp|P9WLH4|Y2228_MYCTO Uncharacterized protein MT2287; TrEMBL-Plants: tr|A0A0B2Q0J9|A0A0B2Q0J9_GLYSO Uncharacterized protein; Found in the gene: LotjaGi2g1v0250200 10
Ribonuclease H; TAIR: AT3G01410.1 Polynucleotidyl transferase, ribonuclease H-like superfamily protein; Swiss-Prot: sp|P9WLH4|Y2228_MYCTO Uncharacterized protein MT2287; TrEMBL-Plants: tr|A0A0B2Q0J9|A0A0B2Q0J9_GLYSO Uncharacterized protein; Found in the gene: LotjaGi2g1v0250200 10
Ribonuclease H; TAIR: AT3G01410.1 Polynucleotidyl transferase, ribonuclease H-like superfamily protein; Swiss-Prot: sp|P9WLH4|Y2228_MYCTO Uncharacterized protein MT2287; TrEMBL-Plants: tr|I3RZ82|I3RZ82_LOTJA Uncharacterized protein; Found in the gene: LotjaGi2g1v0250300_LC 11
Ribonuclease H; TAIR: AT3G01410.1 Polynucleotidyl transferase, ribonuclease H-like superfamily protein; Swiss-Prot: sp|P9WLH4|Y2228_MYCTO Uncharacterized protein MT2287; TrEMBL-Plants: tr|I3SU92|I3SU92_LOTJA Uncharacterized protein; Found in the gene: LotjaGi2g1v0250400 10
Pol polyprotein; TAIR: AT1G24090.1 RNase H family protein; Swiss-Prot: sp|Q99315|YG31B_YEAST Transposon Ty3-G Gag-Pol polyprotein; TrEMBL-Plants: tr|A0A151T6G8|A0A151T6G8_CAJCA Transposon Ty3-I Gag-Pol polyprotein; Found in the gene: LotjaGi2g1v0325800_LC 24
Retrovirus-related Pol polyprotein from transposon 297 family; TAIR: AT3G01410.1 Polynucleotidyl transferase, ribonuclease H-like superfamily protein; Swiss-Prot: sp|P9WLH4|Y2228_MYCTO Uncharacterized protein MT2287; TrEMBL-Plants: tr|A0A151RP08|A0A151RP08_CAJCA Retrovirus-related Pol polyprotein from transposon 17.6; Found in the gene: LotjaGi3g1v0250200_LC 18
Retrovirus-related Pol polyprotein from transposon 297 family; TAIR: AT3G01410.1 Polynucleotidyl transferase, ribonuclease H-like superfamily protein; Swiss-Prot: sp|Q9HSF6|RNH_HALSA Ribonuclease HI; TrEMBL-Plants: tr|A0A151RP08|A0A151RP08_CAJCA Retrovirus-related Pol polyprotein from transposon 17.6; Found in the gene: LotjaGi3g1v0418300_LC 9
Ribonuclease H; TAIR: AT1G24090.1 RNase H family protein; Swiss-Prot: sp|P9WLH4|Y2228_MYCTO Uncharacterized protein MT2287; TrEMBL-Plants: tr|V7C8T8|V7C8T8_PHAVU Uncharacterized protein; Found in the gene: LotjaGi4g1v0161500 10
Ribonuclease H; TAIR: AT1G24090.1 RNase H family protein; Swiss-Prot: sp|P9WLH4|Y2228_MYCTO Uncharacterized protein MT2287; TrEMBL-Plants: tr|A0A0R0FBC1|A0A0R0FBC1_SOYBN Uncharacterized protein; Found in the gene: LotjaGi4g1v0161500 10
Ribonuclease H; TAIR: AT1G24090.1 RNase H family protein; Swiss-Prot: sp|P9WLH4|Y2228_MYCTO Uncharacterized protein MT2287; TrEMBL-Plants: tr|V7C8T8|V7C8T8_PHAVU Uncharacterized protein; Found in the gene: LotjaGi4g1v0161500 10
Pol polyprotein; TAIR: AT1G24090.1 RNase H family protein; Swiss-Prot: sp|Q7LHG5|YI31B_YEAST Transposon Ty3-I Gag-Pol polyprotein; TrEMBL-Plants: tr|A0A151R4E2|A0A151R4E2_CAJCA Transposon Ty3-I Gag-Pol polyprotein; Found in the gene: LotjaGi4g1v0300100_LC 20
Retrovirus-related Pol polyprotein from transposon 297 family; TAIR: AT3G01410.1 Polynucleotidyl transferase, ribonuclease H-like superfamily protein; Swiss-Prot: sp|Q9HSF6|RNH_HALSA Ribonuclease HI; TrEMBL-Plants: tr|A0A151RP08|A0A151RP08_CAJCA Retrovirus-related Pol polyprotein from transposon 17.6; Found in the gene: LotjaGi5g1v0037200_LC 10
Retrovirus-related Pol polyprotein from transposon 297 family; TAIR: AT3G01410.1 Polynucleotidyl transferase, ribonuclease H-like superfamily protein; Swiss-Prot: sp|Q9HSF6|RNH_HALSA Ribonuclease HI; TrEMBL-Plants: tr|A0A151RP08|A0A151RP08_CAJCA Retrovirus-related Pol polyprotein from transposon 17.6; Found in the gene: LotjaGi5g1v0134100_LC 10
Retrovirus-related Pol polyprotein from transposon 297 family; TAIR: AT3G01410.1 Polynucleotidyl transferase, ribonuclease H-like superfamily protein; Swiss-Prot: sp|P9WLH4|Y2228_MYCTO Uncharacterized protein MT2287; TrEMBL-Plants: tr|A0A1B5Z931|A0A1B5Z931_TRISU Uncharacterized protein; Found in the gene: LotjaGi5g1v0230800_LC 9
Retrovirus-related Pol polyprotein from transposon 297 family; TAIR: AT3G01410.1 Polynucleotidyl transferase, ribonuclease H-like superfamily protein; Swiss-Prot: sp|P9WLH4|Y2228_MYCTO Uncharacterized protein MT2287; TrEMBL-Plants: tr|A0A1B5Z7G0|A0A1B5Z7G0_TRISU Uncharacterized protein; Found in the gene: LotjaGi5g1v0231000_LC 9
Gag-pol polyprotein; TAIR: AT3G01410.1 Polynucleotidyl transferase, ribonuclease H-like superfamily protein; Swiss-Prot: sp|Q5RBK0|GIN1_PONAB Gypsy retrotransposon integrase-like protein 1; TrEMBL-Plants: tr|A0A151QYL3|A0A151QYL3_CAJCA Retrovirus-related Pol polyprotein from transposon 297 family; Found in the gene: LotjaGi6g1v0063200_LC 16
Retrovirus-related Pol polyprotein from transposon 297 family; TAIR: AT3G01410.1 Polynucleotidyl transferase, ribonuclease H-like superfamily protein; Swiss-Prot: sp|Q9HSF6|RNH_HALSA Ribonuclease HI; TrEMBL-Plants: tr|A0A151U9S6|A0A151U9S6_CAJCA Retrovirus-related Pol polyprotein from transposon 17.6; Found in the gene: LotjaGi6g1v0151700_LC 20

Co-occuring domains 1

A list of co-occurring predicted domains within the L. japonicus gene space:

Predicted domain Source Observations Saturation (%)
cd09279 CDD 1 2.63