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SSF55257

Source: SUPERFAMILY

Description

No description is available for this domain.

Associated GO terms

GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .

GO term Namespace Name Definition Relationships
GO:0006351
Biological process Transcription, DNA-templated The cellular synthesis of RNA on a template of DNA.
Subterm of
Part of
GO:0046983
Molecular function Protein dimerization activity The formation of a protein dimer, a macromolecular structure consists of two noncovalently associated identical or nonidentical subunits.
Subterm of

Associated Lotus transcripts 18

Transcript Name Description Predicted domains Domain count
Lj0g3v0213949.1
– PREDICTED: DNA-directed RNA polymerases I and III subunit RPAC2-like [Cicer arietinum] gi|502102259|ref|XP_004492017.1|
Domains
10
Lj0g3v0333049.1
– PREDICTED: DNA-directed RNA polymerases I and III subunit RPAC2-like [Cicer arietinum] gi|502102259|ref|XP_004492017.1|
Domains
10
Lj0g3v0333049.2
– PREDICTED: DNA-directed RNA polymerases I and III subunit RPAC2-like [Cicer arietinum] gi|502102259|ref|XP_004492017.1|
Domains
10
Lj0g3v0333059.1
–
Domains
3
Lj3g3v3690050.1
– PREDICTED: DNA-directed RNA polymerase II subunit RPB11 [Glycine max] gi|356531671|ref|XP_003534400.1|
Domains
9
Lj4g3v0654400.1
– PREDICTED: DNA-directed RNA polymerase II subunit RPB3-A-like [Cicer arietinum] gi|502143329|ref|XP_004505300.1|
Domains
5
Lj6g3v0727740.1
– PREDICTED: DNA-directed RNA polymerases I and III subunit RPAC1-like [Cicer arietinum] gi|502086655|ref|XP_004488284.1|
Domains
16
Lj6g3v1752970.1
– PREDICTED: DNA-directed RNA polymerases I and III subunit RPAC2-like [Cicer arietinum] gi|502102259|ref|XP_004492017.1|
Domains
10
Ljchlorog3v0010820.1
– RNA polymerase alpha subunit [Lotus japonicus] gi|13518470|ref|NP_084829.1|
Domains
13
LotjaGi1g1v0525600.1
– DNA-directed RNA polymerase; TAIR: AT2G29540.1 RNApolymerase 14 kDa subunit; Swiss-Prot: sp|P97304|RPAC2_MOUSE DNA-directed RNA polymerases I and III subunit RPAC2; TrEMBL-Plants: tr|I3S968|I3S968_LOTJA Uncharacterized protein; Found in the gene: LotjaGi1g1v0525600
Domains
11
LotjaGi3g1v0550300.1
– DNA-directed RNA polymerase; TAIR: AT3G52090.1 DNA-directed RNA polymerase, RBP11-like protein; Swiss-Prot: sp|Q38859|NRPBB_ARATH DNA-directed RNA polymerases II, IV and V subunit 11; TrEMBL-Plants: tr|I3T213|I3T213_LOTJA Uncharacterized protein; Found in the gene: LotjaGi3g1v0550300
Domains
12
LotjaGi3g1v0550300.2
– DNA-directed RNA polymerase; TAIR: AT3G52090.1 DNA-directed RNA polymerase, RBP11-like protein; Swiss-Prot: sp|Q38859|NRPBB_ARATH DNA-directed RNA polymerases II, IV and V subunit 11; TrEMBL-Plants: tr|I3T213|I3T213_LOTJA Uncharacterized protein; Found in the gene: LotjaGi3g1v0550300
Domains
12
LotjaGi3g1v0550300.3
– DNA-directed RNA polymerase; TAIR: AT3G52090.1 DNA-directed RNA polymerase, RBP11-like protein; Swiss-Prot: sp|Q38859|NRPBB_ARATH DNA-directed RNA polymerases II, IV and V subunit 11; TrEMBL-Plants: tr|I3T213|I3T213_LOTJA Uncharacterized protein; Found in the gene: LotjaGi3g1v0550300
Domains
12
LotjaGi4g1v0083100.1
– DNA-directed RNA polymerase family protein; TAIR: AT2G15430.1 DNA-directed RNA polymerase family protein; Swiss-Prot: sp|Q39211|NRPB3_ARATH DNA-directed RNA polymerases II, IV and V subunit 3; TrEMBL-Plants: tr|A0A0L9TMW4|A0A0L9TMW4_PHAAN Uncharacterized protein; Found in the gene: LotjaGi4g1v0083100
Domains
16
LotjaGi4g1v0083100.2
– DNA-directed RNA polymerase family protein; TAIR: AT2G15430.1 DNA-directed RNA polymerase family protein; Swiss-Prot: sp|Q39211|NRPB3_ARATH DNA-directed RNA polymerases II, IV and V subunit 3; TrEMBL-Plants: tr|A0A0L9TMW4|A0A0L9TMW4_PHAAN Uncharacterized protein; Found in the gene: LotjaGi4g1v0083100
Domains
16
LotjaGi6g1v0141400.1
– DNA-directed RNA polymerase; TAIR: AT1G60620.1 RNA polymerase I subunit 43; Swiss-Prot: sp|Q54SN4|RPAC1_DICDI DNA-directed RNA polymerases I and III subunit rpac1; TrEMBL-Plants: tr|I1N089|I1N089_SOYBN Uncharacterized protein; Found in the gene: LotjaGi6g1v0141400
Domains
17
LotjaGi6g1v0141400.2
– DNA-directed RNA polymerase; TAIR: AT1G60620.1 RNA polymerase I subunit 43; Swiss-Prot: sp|Q54SN4|RPAC1_DICDI DNA-directed RNA polymerases I and III subunit rpac1; TrEMBL-Plants: tr|G7IXS2|G7IXS2_MEDTR DNA-directed RNA polymerase; Found in the gene: LotjaGi6g1v0141400
Domains
16
LotjaGi6g1v0284900.1
– DNA-directed RNA polymerase; TAIR: AT2G29540.1 RNApolymerase 14 kDa subunit; Swiss-Prot: sp|P97304|RPAC2_MOUSE DNA-directed RNA polymerases I and III subunit RPAC2; TrEMBL-Plants: tr|I3S968|I3S968_LOTJA Uncharacterized protein; Found in the gene: LotjaGi6g1v0284900
Domains
11

Co-occuring domains 1

A list of co-occurring predicted domains within the L. japonicus gene space:

Predicted domain Source Observations Saturation (%)
cd07029 CDD 1 5.56