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TIGR01327

Source: TIGRFAM

Description

PGDH: phosphoglycerate dehydrogenase

Associated GO terms

GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .

GO term Namespace Name Definition Relationships
GO:0004617
Molecular function Phosphoglycerate dehydrogenase activity Catalysis of the reaction: 3-phosphoglycerate + NAD+ = 3-phosphohydroxypyruvate + NADH + H+.
Subterm of
GO:0006564
Biological process L-serine biosynthetic process The chemical reactions and pathways resulting in the formation of L-serine, the L-enantiomer of serine, i.e. (2S)-2-amino-3-hydroxypropanoic acid.
Subterm of

Associated Lotus transcripts 5

Transcript Name Description Predicted domains Domain count
Lj0g3v0310819.1
– PREDICTED: d-3-phosphoglycerate dehydrogenase, chloroplastic-like [Glycine max] gi|356521735|ref|XP_003529507.1|
Domains
22
Lj5g3v2113470.2
– PREDICTED: d-3-phosphoglycerate dehydrogenase, chloroplastic-like [Glycine max] gi|356536156|ref|XP_003536605.1|
Domains
29
LotjaGi3g1v0001700.2
– D-3-phosphoglycerate dehydrogenase; TAIR: AT1G17745.1 D-3-phosphoglycerate dehydrogenase; Swiss-Prot: sp|O04130|SERA2_ARATH D-3-phosphoglycerate dehydrogenase 2, chloroplastic; TrEMBL-Plants: tr|A0A1J7IRI9|A0A1J7IRI9_LUPAN Uncharacterized protein; Found in the gene: LotjaGi3g1v0001700
Domains
28
LotjaGi3g1v0343100.1
– D-3-phosphoglycerate dehydrogenase; TAIR: AT1G17745.1 D-3-phosphoglycerate dehydrogenase; Swiss-Prot: sp|O04130|SERA2_ARATH D-3-phosphoglycerate dehydrogenase 2, chloroplastic; TrEMBL-Plants: tr|I1KG47|I1KG47_SOYBN D-3-phosphoglycerate dehydrogenase; Found in the gene: LotjaGi3g1v0343100
Domains
29
LotjaGi5g1v0327800.1
– D-3-phosphoglycerate dehydrogenase; TAIR: AT4G34200.1 D-3-phosphoglycerate dehydrogenase; Swiss-Prot: sp|O49485|SERA1_ARATH D-3-phosphoglycerate dehydrogenase 1, chloroplastic; TrEMBL-Plants: tr|I1LEI9|I1LEI9_SOYBN D-3-phosphoglycerate dehydrogenase; Found in the gene: LotjaGi5g1v0327800
Domains
29

Co-occuring domains 1

A list of co-occurring predicted domains within the L. japonicus gene space:

Predicted domain Source Observations Saturation (%)
cd12173 CDD 1 20.00