Domain Predictions — View

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cd00774

Source: CDD

Description

GlyRS-like_core

Associated GO terms

Unable to find any GO terms for the transcript with the identifier.

Associated Lotus transcripts 2

Transcript	Name	Description	Predicted domains	Domain count
Lj1g3v3328940.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	PREDICTED: glycine--tRNA ligase 1, mitochondrial-like [Cicer arietinum] gi\|502127199\|ref\|XP_004499600.1\|	Domains G3DSA:1.10.287.10 G3DSA:3.30.930.10 G3DSA:3.40.50.800 IPR000738 IPR002314 IPR002315 IPR004154 IPR006195 IPR009068 IPR027031 IPR033731 NON_CYTOPLASMIC_DOMAIN PF00458 PF00587 PF03129 PR01043 PS50862 PS51185 PTHR10745 PTHR10745:SF6 SIGNAL_PEPTIDE SIGNAL_PEPTIDE_C_REGION SIGNAL_PEPTIDE_H_REGION SIGNAL_PEPTIDE_N_REGION SM00991 SSF47060 SSF52954 SSF55681 SignalP-TM_GRAM_POSITIVE TIGR00389 cd00774 cd00858	32
LotjaGi1g1v0551900.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Glycine--tRNA ligase; TAIR: AT1G29880.1 glycyl-tRNA synthetase / glycine-tRNA ligase; Swiss-Prot: sp\|O23627\|SYGM1_ARATH Glycine--tRNA ligase, mitochondrial 1; TrEMBL-Plants: tr\|A0A072U6L4\|A0A072U6L4_MEDTR Glycyl-tRNA synthetase/glycine-tRNA ligase; Found in the gene: LotjaGi1g1v0551900	Domains G3DSA:1.10.287.10 G3DSA:1.10.30.30 G3DSA:1.20.1430.20 G3DSA:3.30.930.10 G3DSA:3.40.50.800 IPR000738 IPR002314 IPR002315 IPR004154 IPR006195 IPR009068 IPR027031 IPR033731 IPR036621 NON_CYTOPLASMIC_DOMAIN PF00458 PF00587 PF03129 PR01043 PS50862 PS51185 PTHR10745 PTHR10745:SF20 SIGNAL_PEPTIDE SIGNAL_PEPTIDE_C_REGION SIGNAL_PEPTIDE_H_REGION SIGNAL_PEPTIDE_N_REGION SM00991 SSF47060 SSF52954 SSF55681 SignalP-TM TIGR00389 cd00774 cd00858	35

Co-occuring domains 1

A list of co-occurring predicted domains within the L. japonicus gene space:

Predicted domain	Source	Observations	Saturation (%)
cd00858	CDD	1	50.00