Domain Predictions — View

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cd01668

Source: CDD

Description

TGS_RelA_SpoT

Associated GO terms

Unable to find any GO terms for the transcript with the identifier.

Associated Lotus transcripts 11

Transcript	Name	Description	Predicted domains	Domain count
Lj1g3v4875630.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	PREDICTED: GTP pyrophosphokinase-like isoform X1 [Cicer arietinum] gi\|502112635\|ref\|XP_004494394.1\|	Domains Coil G3DSA:3.10.20.30 G3DSA:3.30.460.10 G3DSA:3.30.70.260 IPR003607 IPR004095 IPR007685 IPR012675 IPR012676 IPR033655 PF02824 PF04607 PF13328 PTHR21262 PTHR21262:SF13 SM00471 SM00954 SSF109604 SSF55021 SSF81271 SSF81301 cd00077 cd01668 cd05399 mobidb-lite	25
LotjaGi1g1v0763000.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	GTP pyrophosphokinase; TAIR: AT4G02260.2 RELA/SPOT homolog 1; Swiss-Prot: sp\|P0DKG8\|RSH1L_ARATH Putative GTP diphosphokinase RSH1, chloroplastic; TrEMBL-Plants: tr\|A0A0B2QGP0\|A0A0B2QGP0_GLYSO GTP pyrophosphokinase; Found in the gene: LotjaGi1g1v0763000	Domains Coil G3DSA:1.10.3210.10 G3DSA:3.10.20.30 G3DSA:3.30.460.10 G3DSA:3.30.70.260 IPR002912 IPR003607 IPR004095 IPR007685 IPR012675 IPR012676 IPR033655 IPR043519 PF02824 PF04607 PF13328 PS51671 PS51831 PS51880 PTHR43061 PTHR43061:SF1 SM00471 SM00954 SSF109604 SSF55021 SSF81271 SSF81301 cd00077 cd01668 cd05399 mobidb-lite	31
LotjaGi1g1v0763000.2 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	GTP pyrophosphokinase; TAIR: AT4G02260.2 RELA/SPOT homolog 1; Swiss-Prot: sp\|P0DKG8\|RSH1L_ARATH Putative GTP diphosphokinase RSH1, chloroplastic; TrEMBL-Plants: tr\|A0A0B2QGP0\|A0A0B2QGP0_GLYSO GTP pyrophosphokinase; Found in the gene: LotjaGi1g1v0763000	Domains Coil G3DSA:1.10.3210.10 G3DSA:3.10.20.30 G3DSA:3.30.460.10 G3DSA:3.30.70.260 IPR002912 IPR003607 IPR004095 IPR007685 IPR012675 IPR012676 IPR033655 IPR043519 PF02824 PF04607 PF13328 PS51671 PS51831 PS51880 PTHR43061 PTHR43061:SF1 SM00471 SM00954 SSF109604 SSF55021 SSF81271 SSF81301 cd00077 cd01668 cd04873 cd05399 mobidb-lite	32
LotjaGi1g1v0763000.3 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	GTP pyrophosphokinase; TAIR: AT4G02260.2 RELA/SPOT homolog 1; Swiss-Prot: sp\|P0DKG8\|RSH1L_ARATH Putative GTP diphosphokinase RSH1, chloroplastic; TrEMBL-Plants: tr\|A0A0B2QGP0\|A0A0B2QGP0_GLYSO GTP pyrophosphokinase; Found in the gene: LotjaGi1g1v0763000	Domains Coil G3DSA:1.10.3210.10 G3DSA:3.10.20.30 G3DSA:3.30.460.10 G3DSA:3.30.70.260 IPR002912 IPR003607 IPR004095 IPR007685 IPR012675 IPR012676 IPR033655 IPR043519 PF02824 PF04607 PF13328 PS51671 PS51831 PS51880 PTHR43061 PTHR43061:SF1 SM00471 SM00954 SSF109604 SSF55021 SSF81271 SSF81301 cd00077 cd01668 cd04873 cd05399 mobidb-lite	32
LotjaGi1g1v0763000.4 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	GTP pyrophosphokinase; TAIR: AT4G02260.2 RELA/SPOT homolog 1; Swiss-Prot: sp\|P0DKG8\|RSH1L_ARATH Putative GTP diphosphokinase RSH1, chloroplastic; TrEMBL-Plants: tr\|A0A0B2QGP0\|A0A0B2QGP0_GLYSO GTP pyrophosphokinase; Found in the gene: LotjaGi1g1v0763000	Domains Coil G3DSA:1.10.3210.10 G3DSA:3.10.20.30 G3DSA:3.30.460.10 G3DSA:3.30.70.260 IPR002912 IPR003607 IPR004095 IPR007685 IPR012675 IPR012676 IPR033655 IPR043519 PF02824 PF04607 PF13328 PS51671 PS51831 PS51880 PTHR43061 PTHR43061:SF1 SM00471 SM00954 SSF109604 SSF55021 SSF81271 SSF81301 cd00077 cd01668 cd05399 mobidb-lite	31
LotjaGi2g1v0448600.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Guanosine-3',5'-bis(Diphosphate) 3'-pyrophosphohydrolase; TAIR: AT1G54130.1 RELA/SPOT homolog 3; Swiss-Prot: sp\|Q9SYH1\|RSH3C_ARATH Probable GTP diphosphokinase RSH3, chloroplastic; TrEMBL-Plants: tr\|A0A0B2R105\|A0A0B2R105_GLYSO Putative GTP pyrophosphokinase; Found in the gene: LotjaGi2g1v0448600	Domains G3DSA:1.10.3210.10 G3DSA:3.10.20.30 G3DSA:3.30.460.10 IPR003607 IPR004095 IPR007685 IPR012675 IPR033655 IPR043519 PF02824 PF04607 PF13328 PS51831 PTHR21262 PTHR21262:SF31 SM00471 SM00954 SSF109604 SSF81301 cd00077 cd01668 cd05399	22
LotjaGi2g1v0448600.2 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Guanosine-3',5'-bis(Diphosphate) 3'-pyrophosphohydrolase; TAIR: AT1G54130.1 RELA/SPOT homolog 3; Swiss-Prot: sp\|Q9SYH1\|RSH3C_ARATH Probable GTP diphosphokinase RSH3, chloroplastic; TrEMBL-Plants: tr\|A0A0B2R105\|A0A0B2R105_GLYSO Putative GTP pyrophosphokinase; Found in the gene: LotjaGi2g1v0448600	Domains G3DSA:1.10.3210.10 G3DSA:3.10.20.30 G3DSA:3.30.460.10 IPR003607 IPR004095 IPR007685 IPR012675 IPR033655 IPR043519 PF02824 PF04607 PF13328 PS51831 PTHR21262 PTHR21262:SF31 SM00471 SM00954 SSF109604 SSF81301 cd00077 cd01668 cd05399	22
LotjaGi2g1v0448600.3 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Guanosine-3',5'-bis(Diphosphate) 3'-pyrophosphohydrolase, putative; TAIR: AT1G54130.1 RELA/SPOT homolog 3; Swiss-Prot: sp\|Q9SYH1\|RSH3C_ARATH Probable GTP diphosphokinase RSH3, chloroplastic; TrEMBL-Plants: tr\|A0A0R0HH22\|A0A0R0HH22_SOYBN Uncharacterized protein; Found in the gene: LotjaGi2g1v0448600	Domains G3DSA:1.10.3210.10 G3DSA:3.10.20.30 G3DSA:3.30.460.10 IPR003607 IPR004095 IPR007685 IPR012675 IPR033655 IPR043519 PF02824 PF04607 PF13328 PS51831 PTHR21262 PTHR21262:SF31 SM00471 SM00954 SSF109604 SSF81301 cd00077 cd01668 cd05399	22
LotjaGi2g1v0448600.4 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Guanosine-3',5'-bis(Diphosphate) 3'-pyrophosphohydrolase; TAIR: AT1G54130.1 RELA/SPOT homolog 3; Swiss-Prot: sp\|Q9SYH1\|RSH3C_ARATH Probable GTP diphosphokinase RSH3, chloroplastic; TrEMBL-Plants: tr\|A0A0R0LJ13\|A0A0R0LJ13_SOYBN Uncharacterized protein; Found in the gene: LotjaGi2g1v0448600	Domains G3DSA:1.10.3210.10 G3DSA:3.10.20.30 G3DSA:3.30.460.10 IPR003607 IPR004095 IPR007685 IPR012675 IPR033655 IPR043519 PF02824 PF04607 PF13328 PS51831 PTHR21262 PTHR21262:SF31 SM00471 SM00954 SSF109604 SSF81301 cd00077 cd01668 cd05399	22
LotjaGi2g1v0448600.5 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Guanosine-3',5'-bis(Diphosphate) 3'-pyrophosphohydrolase; TAIR: AT1G54130.1 RELA/SPOT homolog 3; Swiss-Prot: sp\|Q9SYH1\|RSH3C_ARATH Probable GTP diphosphokinase RSH3, chloroplastic; TrEMBL-Plants: tr\|A0A0R0LJ13\|A0A0R0LJ13_SOYBN Uncharacterized protein; Found in the gene: LotjaGi2g1v0448600	Domains G3DSA:1.10.3210.10 G3DSA:3.10.20.30 G3DSA:3.30.460.10 IPR003607 IPR004095 IPR007685 IPR012675 IPR033655 IPR043519 PF02824 PF04607 PF13328 PS51831 PTHR21262 PTHR21262:SF31 SM00471 SM00954 SSF109604 SSF81301 cd00077 cd01668 cd05399	22
LotjaGi2g1v0448600.6 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Guanosine-3',5'-bis(Diphosphate) 3'-pyrophosphohydrolase; TAIR: AT1G54130.1 RELA/SPOT homolog 3; Swiss-Prot: sp\|Q9SYH1\|RSH3C_ARATH Probable GTP diphosphokinase RSH3, chloroplastic; TrEMBL-Plants: tr\|A0A0B2R105\|A0A0B2R105_GLYSO Putative GTP pyrophosphokinase; Found in the gene: LotjaGi2g1v0448600	Domains G3DSA:1.10.3210.10 G3DSA:3.10.20.30 G3DSA:3.30.460.10 IPR003607 IPR004095 IPR007685 IPR012675 IPR033655 IPR043519 PF02824 PF04607 PF13328 PS51831 PTHR21262 PTHR21262:SF31 SM00471 SM00954 SSF109604 SSF81301 cd00077 cd01668 cd05399	22

Co-occuring domains 1

A list of co-occurring predicted domains within the L. japonicus gene space:

Predicted domain	Source	Observations	Saturation (%)
cd05399	CDD	1	9.09