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| Field | Value |
|---|---|
| Gene ID | LotjaGi1g1v0763000 |
| Transcript ID | LotjaGi1g1v0763000.3 |
| Related isoforms 3 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | GTP pyrophosphokinase; TAIR: AT4G02260.2 RELA/SPOT homolog 1; Swiss-Prot: sp|P0DKG8|RSH1L_ARATH Putative GTP diphosphokinase RSH1, chloroplastic; TrEMBL-Plants: tr|A0A0B2QGP0|A0A0B2QGP0_GLYSO GTP pyrophosphokinase; Found in the gene: LotjaGi1g1v0763000 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr1:133563377..133569007) extracted from Lotus japonicus Gifu genome v1.2.
GAGGTACAGTCCTGAATTTTACTGAACCTGGCATGTCTATTGATGATAATAGTCCTACAAACAAGGGAGTCTTCTTTGCT AACATTAGTTATACTATCTATTATCTGATTACCTCAGGATCTTAAACCTGTCATTTCATACCTGTCCCAGAAAGAACTGG AGTTAGTCCGTAAGGCTTTTATGGTAAGCTGACTACATCAAGAAGCAATCTTAAGATGCTCTTTTTGGAAAAATCACCTC TTGAACACTGAAGGAATTGACGTTTTGTATTGTTTCTGTTTTACTCCCTGTTGTGACAGTTGGCATTTGAAGCTCATGAT GGACAGAAAAGACGCAGTGGTGAACCCTTCATCATTCATCCAGTCGAGGTTGCACGAATTCTCGGAGAACTTGTGAGTCA TGACAAAATGCTTCCTGTTCTGGAAAATTGTACATATGTGAGTATAACAAGTCAATATGATAATGCATCCAACCATTTGT CTAGGAACTTGATTGGGAGTCGATTGTTGCTGGGTTACTTCATGACACAGTTGAGGATACTGATGTTGTTACTTTTGAGA GGATAGAGGATGAATTTGGCGCTACTGTGCGACACATTGTGGAAGGAGAGACAAAGGTACTTCTATTCTTTATTTTATAT TTTAATGTATTTGTGAAATATCTATAATCGTCAAGAGCTTTGATTCTATATTCATAAACTTACCACATAAATTGGATGCA TATTAAATCCTTAATCCCAACTAGGTGTCAAAGCTAGGAAAATTGAAGTATAAGAATGAAAATGATTCCGTTCAAGATGT GAAAGCAGAGGATCTTCGACAAATGTTTCTTGCTATGACAGAGGAGGTGACCACTTTTCCATAAAAATTGCTTGTCTATT CCCAGCGTATTCTATGCAACTTACGAATTTGTTATTACTCATTGCAGGTTCGTGTTATTATTGTCAAGTTAGCAGACAGG TTACATAACATGCGCACTCTATCACATATGCCTCCACATAAACAGGTTAGTTCCATTGGTTTGAATAACCAACTGGTGAC TCTTTTCTGTTCAGCCAAAAGAAAGGAAACAATGATGGCCTTGAAATCCTTTTACTTTCCAGAATAGCATCGCGATGGAG ACATTACAGGTGTTTGCTCCTTTGGCAAAGTTGCTTGGGATGTATCAAATAAAGGTATACTGTAATTATATAGCCACTAA GGACTTGCATTCCTGTTTTGGTTTCTATAATGACACAAGTTCACCTGACCGAAGTAGAACTCAGGCTAGGAATACTTATT TAAGTTCATTAAAGTATATCTATATTTCACCACTTGGGGGGAAATTCTCATATATCTTGATTCATAATTATACTGTTTTT ATGACGCAGTCAGAACTAGAAAATCTGTCATTTATGTACACAAATGCCGAAGATTATGCTAAGGTGAAGAGGAGAGCTGC AGACCTATACAAAGAACATGAAAAAGAACTTTTGGAGGTAATTCTGGTCATCCTATCTCAAATTATTATTTAAATAGGCT AGTTATAAGATTATATCTGCATGCTGTACACTTCTATATATCCATTTATTAAAAAAATTTCAGGGTGATTTTGTATCATT GCATTCCATTGATCAAACTTCTTTTTTCTCCCTTTCTTGATAGGCAAACAAAATATTGGTGAAGAAAATCCAAGATGATC AGTTCTTAGAACTTTTGACAGTTAAAACAGAAGTCCGTGCTGTGTGTAAAGAGCCATACAGGTATAAGCCACATAGCTCA GTGCCAAAATGCCACCATTTTGTTTATCCACCTGTTCATGTTGCATGTGTTTGGCATTATATACATTTTGCATGTCACAG TCTTGTTGTTCACTCTATCCCTTGAATTGCTTCTACATAAATGCATGCTTTTGTTTTGTAATTTGAGACACATTTTTCTG GCTATATATTGAGAAATATTACTGATAATTTGCAGTATCTATAAAGCTGTTCTCAAATCAAAAAGTTTGATCAGCGAGAT TAACCAAATTGCACAGGTTTGCTTTGATATATACCTTGAGATGCTTAATGTGTTATATAAAGAATTCGGATAAAAAAATT TGTTTGTTGTGACCAGCTTCGTATAATTATTAAACCAAAACCATGCATTGGGGTTGGGCCTTTATGCAGTCCACAGAAGG TAACCACTTTGTCCATAATGACATATATGACTGTTTTCCACTTGCTCCCCTTTTAAGTTGGTATATTAGAAGGCTTTCTC TCTTTATGTTCTCTGCAGATTTGCTATCATGTTCTAGGGTTGATCCATGGAATCTGGACCCCTATTCCTAGATCTGTACG TATGTTATTCTTTTATTTAACTTGAGAGCAGAAAGTTTTAGTTTTGAGAGAACCAAGTTTTCATTGACTGGTGAGAAATA TTTGATTTGTTTTATTTTATCATAGATGAAGGACTATATTGCAACCCCTAAACCTAATGGCTATCAGAGTCTTCAAACCA CTGTGATTCCTTTTCTGTATGAGAGCATGTTTAGGCTTGAAGTCCAGGTATATTTTTCGTTATTTTTAGATTTATATTTG CACTTTCCATTTTCTTCAATGAATTTTTTATAGAGCCCTAGCTGATCAAAATGAAGTTGATCTCAAAATTTTCTTCTGTG TCCTTTTCGATTTATTTATTTGTTCAGATTAGAACAGAAGAAATGGATTTGATAGCTGAGAGGGGCATTGCTGCTCATTA TAGTGGTAGAGAATTTGTCACCAGCTTGGTTGGAAGTGCGATGCCTGGTGGTAAAAGCCCAAGAGGGAAGGCAGTGTGTC TTAACAATGCCAACATTGCACTCAGAGTATGCTATCTGTCCCTGAAAGATTCTGATAGAATAATCTTTTAAAGAGTTCTT AGTAAAACCCATCACCCAATTTTGATGCCATTAGGCTGTAGGCCTTGTGGTAGTAACCTTGGCTTTGCACCGGAAAAAAA GACCTTGATGCTTGTTTCATGTTCCTTTCCTACAGATTGGCTGGCTCAATGCGATTAGAGAGTGGCAAGAAGAGTTTGTA GGCAACATGAGTTCTAGGGAATTTGTGGACACTATTACAAGAGATCTGTTGGGCAGTCGTGTCTTTGTTTTCACACCCAG GGGAGAGGTACAGTTGGACTATTTCATATACCGTATGATTATTTTTGCTGTTCAATTTATTCATAAGATCATTAAGAAGC TTGTATATCAGAATACTTCTGCAGATTCATGATACCTCTTTTTTATTTCTCCATGTTATGTGCAGATTAAGAATCTTCCC CAGGGTGCTACGGTCATTGACTATGCTTATATGATACACACTGAAATTGGCAACAAGATGGTGGCTGCTAAGGTATTTCC CTCATTTTCTTGCTAAAAAGAAAAGACGGATATAAAGTAAAATATTTGTATCATTGTAATAGTAGTGCTCATTTGGTGTA AATGCAGGTCAACGGTAATCTTGTTTCTCCTGCACGTGTACTTGCGAATGCTGAAGTTGTGGAGATAATCACATATAATG TCAGTATTGTTCGACTCACTTCATATGCTTTCCTTTTCATTAATAGATTTGATGTAATTGGAAAGTGCTTATTTGAACAT ATTAAAACATAAATATAATTTGCAAGGCGTGTGATGTGATGTTGATTTAATTGTATGATTCACTACATGCAGTTCTCCAA GTTTCAGATTTATGATCTAAGCATGTGCTGTCAAATGTTTTGGGTGTTAAGTTTATATGTTTACACAAAGTTTGTTTGTT AGAATATCTCAGAATATCTCGAGAGTATTTCAGAATATCTTAGCATGTTATCATAATATATTTGTATTATAATATTCCTA TATATTATGGAGTCAACTATTCATCTTAACGCGGAGGCAATCTTAGAATTTGTTCTATATTCGTTTAATAATAAGTATCA GCTGTAGTGCTATTATGTTAGTGGGCTTCAAGCTCCTCCGAGTAATATTATGCTAGTGTTTGACCCTAATTGCTAGTGTT TTAACAAGATTGCTGAGTTATACACCATTTCGCACCATATCAAAGGAATAGAATCTCCTTATATTCCTCTTACTCAGCTT CCTATCTAAATCCCTATAATTTCACTACTGTTATTAGTTATAATAATTTTTATGTTTCTTCCATGACAATGATCAATTGT TTATACCTTTTCTAAAACTGTTACCTGGGGAAATTGTTACTGATTTATATATACATTGCCAATCACAACTACCTTATAGG CATATACCCTTCACTTCATTAGAACTCATAACTTTGTTATCAGGCTCTTTCCAGTAAATCAGCTTTTCAGAGGCATAAGC AATGGTTGCAACATGCTAAAACGCGTAGTGCAAGGCACAAAATAATGAAGGTAGGATTTCATAAATGTTGAGCATAATTG ACATTATTGCTGAAAAAGTTATGCTCTAACTAAACATGTTATATTTTTGTGCAGTTTCTGAGGGAGCAGGCTGCACGTTC TGCTGCTGATATCACCACAGAAGCAGTCAATGACTTTGTCACTGATTCTGGAGAGGATAGTGAATCAGAAGAACAGTCAA ATAGTTCTAGTGATTCGAAACATACTTGGGGGAAAATGTTTGTGAATGGTGTGGAAATATCAACTCCAGAGAGAAGTGAG ACTATCCTCCAAAGTACGAATGGAAGTGTTTGGACCCCTAAGGTCAATGGAAAACATAATAAGCATGTGCAGCATGTAAG TGTTAAGGGCAATGAGGAGATGTTTCTGCAGGGAAGTCATATTGCCAAGATGATTCAAGTTAACTTGCCAAAATATAAGG AAGTGCTGCCAGGTATAGAAAGTTGGCAGGCCCTGAAAATTACATCCTGGCACAATATAGAAGGGCACTCCGTCCAGTGG TTATTTGTAGTATGCATAGACCGCAGAGGTAAGCTTTACTCCTAATAATATTGATCAAATCCGCTTTTGCGAGGATGTGC AAGATGAAAATTAACATTGCTGGTAGAGGATATGCTATGCTTAATAATACACTCTTAACACATGATACATTGTTAATATT TAATCATTTCCTGGTCATCCATGGCTATAAAAAGGATGTTTTTCACCTTGTGGCCAATGAACTTTGCATTAACTGCATTT TCTGCTCTGGTTGATGATGACTTATCTCTCTTACACCAAACCAATGCTATCTGATTATCTTGGTTTTGACCTAGTAAAGA ATTATTTCAGGCATAATGGCAGAGGTCACTACAGCATTGGCCACAGCAGACATAACCATATGTTCTTGTGTGGTGAGTGG GCAAACCAAGTCCCATAATTTGTACTAAAAGAATATATCTTTGACATTATGCAAGTATGGTTCTATTTTGGCATATCTGT TAACGCTTGACTTATTGAATGAGCAGGCTGAGATTGATAGAGGAAGGGGAATGGCTGTTATGTTATTTCATGTAGAAGGA AATTTAGAAAATTTGGTAAGTATCATGCCTAACACTCAGCATTGATCATTGAATGCTCTCTTGGTAACACATAATTTGTT TCTCAGGTGATTGCTTGCTCTAAAGTAGATTTAATACTGGGCGTTTTGGGATGGTCTACCGGTTGCAGCTGGCCAAGCTT GATGGAAGACCGTGGCGTACTCGAATGCTAG
CDS sequence (LotjaGi1g1v0763000.3) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGTTGGCATTTGAAGCTCATGATGGACAGAAAAGACGCAGTGGTGAACCCTTCATCATTCATCCAGTCGAGGTTGCACG AATTCTCGGAGAACTTGAACTTGATTGGGAGTCGATTGTTGCTGGGTTACTTCATGACACAGTTGAGGATACTGATGTTG TTACTTTTGAGAGGATAGAGGATGAATTTGGCGCTACTGTGCGACACATTGTGGAAGGAGAGACAAAGGTGTCAAAGCTA GGAAAATTGAAGTATAAGAATGAAAATGATTCCGTTCAAGATGTGAAAGCAGAGGATCTTCGACAAATGTTTCTTGCTAT GACAGAGGAGGTTCGTGTTATTATTGTCAAGTTAGCAGACAGGTTACATAACATGCGCACTCTATCACATATGCCTCCAC ATAAACAGAATAGCATCGCGATGGAGACATTACAGGTGTTTGCTCCTTTGGCAAAGTTGCTTGGGATGTATCAAATAAAG TCAGAACTAGAAAATCTGTCATTTATGTACACAAATGCCGAAGATTATGCTAAGGTGAAGAGGAGAGCTGCAGACCTATA CAAAGAACATGAAAAAGAACTTTTGGAGGCAAACAAAATATTGGTGAAGAAAATCCAAGATGATCAGTTCTTAGAACTTT TGACAGTTAAAACAGAAGTCCGTGCTGTGTGTAAAGAGCCATACAGTATCTATAAAGCTGTTCTCAAATCAAAAAGTTTG ATCAGCGAGATTAACCAAATTGCACAGCTTCGTATAATTATTAAACCAAAACCATGCATTGGGGTTGGGCCTTTATGCAG TCCACAGAAGATTTGCTATCATGTTCTAGGGTTGATCCATGGAATCTGGACCCCTATTCCTAGATCTATGAAGGACTATA TTGCAACCCCTAAACCTAATGGCTATCAGAGTCTTCAAACCACTGTGATTCCTTTTCTGTATGAGAGCATGTTTAGGCTT GAAGTCCAGATTAGAACAGAAGAAATGGATTTGATAGCTGAGAGGGGCATTGCTGCTCATTATAGTGGTAGAGAATTTGT CACCAGCTTGGTTGGAAGTGCGATGCCTGGTGGTAAAAGCCCAAGAGGGAAGGCAGTGTGTCTTAACAATGCCAACATTG CACTCAGAATTGGCTGGCTCAATGCGATTAGAGAGTGGCAAGAAGAGTTTGTAGGCAACATGAGTTCTAGGGAATTTGTG GACACTATTACAAGAGATCTGTTGGGCAGTCGTGTCTTTGTTTTCACACCCAGGGGAGAGATTAAGAATCTTCCCCAGGG TGCTACGGTCATTGACTATGCTTATATGATACACACTGAAATTGGCAACAAGATGGTGGCTGCTAAGGTCAACGGTAATC TTGTTTCTCCTGCACGTGTACTTGCGAATGCTGAAGTTGTGGAGATAATCACATATAATGCTCTTTCCAGTAAATCAGCT TTTCAGAGGCATAAGCAATGGTTGCAACATGCTAAAACGCGTAGTGCAAGGCACAAAATAATGAAGTTTCTGAGGGAGCA GGCTGCACGTTCTGCTGCTGATATCACCACAGAAGCAGTCAATGACTTTGTCACTGATTCTGGAGAGGATAGTGAATCAG AAGAACAGTCAAATAGTTCTAGTGATTCGAAACATACTTGGGGGAAAATGTTTGTGAATGGTGTGGAAATATCAACTCCA GAGAGAAGTGAGACTATCCTCCAAAGTACGAATGGAAGTGTTTGGACCCCTAAGGTCAATGGAAAACATAATAAGCATGT GCAGCATGTAAGTGTTAAGGGCAATGAGGAGATGTTTCTGCAGGGAAGTCATATTGCCAAGATGATTCAAGTTAACTTGC CAAAATATAAGGAAGTGCTGCCAGGTATAGAAAGTTGGCAGGCCCTGAAAATTACATCCTGGCACAATATAGAAGGGCAC TCCGTCCAGTGGTTATTTGTAGTATGCATAGACCGCAGAGGCATAATGGCAGAGGTCACTACAGCATTGGCCACAGCAGA CATAACCATATGTTCTTGTGTGGCTGAGATTGATAGAGGAAGGGGAATGGCTGTTATGTTATTTCATGTAGAAGGAAATT TAGAAAATTTGGTGATTGCTTGCTCTAAAGTAGATTTAATACTGGGCGTTTTGGGATGGTCTACCGGTTGCAGCTGGCCA AGCTTGATGGAAGACCGTGGCGTACTCGAATGCTAG
Protein sequence (LotjaGi1g1v0763000.3) extracted from Lotus japonicus Gifu v1.2 Proteins.
MLAFEAHDGQKRRSGEPFIIHPVEVARILGELELDWESIVAGLLHDTVEDTDVVTFERIEDEFGATVRHIVEGETKVSKL GKLKYKNENDSVQDVKAEDLRQMFLAMTEEVRVIIVKLADRLHNMRTLSHMPPHKQNSIAMETLQVFAPLAKLLGMYQIK SELENLSFMYTNAEDYAKVKRRAADLYKEHEKELLEANKILVKKIQDDQFLELLTVKTEVRAVCKEPYSIYKAVLKSKSL ISEINQIAQLRIIIKPKPCIGVGPLCSPQKICYHVLGLIHGIWTPIPRSMKDYIATPKPNGYQSLQTTVIPFLYESMFRL EVQIRTEEMDLIAERGIAAHYSGREFVTSLVGSAMPGGKSPRGKAVCLNNANIALRIGWLNAIREWQEEFVGNMSSREFV DTITRDLLGSRVFVFTPRGEIKNLPQGATVIDYAYMIHTEIGNKMVAAKVNGNLVSPARVLANAEVVEIITYNALSSKSA FQRHKQWLQHAKTRSARHKIMKFLREQAARSAADITTEAVNDFVTDSGEDSESEEQSNSSSDSKHTWGKMFVNGVEISTP ERSETILQSTNGSVWTPKVNGKHNKHVQHVSVKGNEEMFLQGSHIAKMIQVNLPKYKEVLPGIESWQALKITSWHNIEGH SVQWLFVVCIDRRGIMAEVTTALATADITICSCVAEIDRGRGMAVMLFHVEGNLENLVIACSKVDLILGVLGWSTGCSWP SLMEDRGVLEC
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| Gene3D | 1 | 172 | 172 | 1.6E-67 | – | |
| PANTHER | 2 | 731 | 730 | 0.0 | – | |
| PANTHER | 2 | 731 | 730 | 0.0 | – | |
| SUPERFAMILY | 2 | 171 | 170 | 5.02E-58 | – | |
| Pfam | 2 | 156 | 155 | 1.5E-42 | – | |
| SMART | 14 | 134 | 121 | 2.9E-8 | ||
| CDD | 16 | 147 | 132 | 1.48197E-7 | ||
| ProSiteProfiles | 18 | 125 | 108 | 15.671 | ||
| Gene3D | 174 | 327 | 154 | 1.5E-32 | ||
| SUPERFAMILY | 175 | 346 | 172 | 1.96E-34 | ||
| Coils | 180 | 200 | 21 | - | – | |
| CDD | 196 | 335 | 140 | 1.04517E-29 | ||
| Pfam | 225 | 341 | 117 | 1.9E-20 | ||
| SMART | 225 | 347 | 123 | 7.6E-33 | ||
| SUPERFAMILY | 399 | 471 | 73 | 2.45E-16 | ||
| Gene3D | 405 | 479 | 75 | 3.4E-27 | ||
| ProSiteProfiles | 408 | 471 | 64 | 15.356 | – | |
| Pfam | 412 | 471 | 60 | 1.3E-18 | ||
| CDD | 413 | 471 | 59 | 5.8765E-32 | ||
| MobiDBLite | 525 | 546 | 22 | - | – | |
| Gene3D | 643 | 704 | 62 | 4.9E-5 | – | |
| ProSiteProfiles | 644 | 715 | 72 | 8.581 | ||
| SUPERFAMILY | 644 | 695 | 52 | 3.33E-7 | – | |
| CDD | 645 | 693 | 49 | 9.3317E-5 | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Biological process | Guanosine tetraphosphate metabolic process | The chemical reactions and pathways involving guanine tetraphosphate (5'-ppGpp-3'), a derivative of guanine riboside with four phosphates. |
Expression pattern of LotjaGi1g1v0763000.3, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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