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| Field | Value |
|---|---|
| Gene ID | Lj1g3v4875630 |
| Transcript ID | Lj1g3v4875630.1 |
| Lotus japonicus genome version | MG20 v3.0 |
| Description | PREDICTED: GTP pyrophosphokinase-like isoform X1 [Cicer arietinum] gi|502112635|ref|XP_004494394.1| |
| Working Lj name | n.a. |
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| PANTHER | 97 | 495 | 399 | 0 | – | |
| PANTHER | 97 | 495 | 399 | 0 | – | |
| SUPERFAMILY | 132 | 321 | 190 | 7.22E-62 | – | |
| Pfam | 149 | 306 | 158 | 5.10E-43 | ||
| SMART | 164 | 284 | 121 | 2.90E-08 | ||
| CDD | 166 | 297 | 132 | 1.27E-07 | – | |
| Gene3D | 324 | 477 | 154 | 3.50E-28 | – | |
| SUPERFAMILY | 326 | 496 | 171 | 3.27E-33 | – | |
| Coils | 330 | 350 | 21 | – | – | |
| CDD | 346 | 485 | 140 | 7.11E-29 | ||
| SMART | 375 | 497 | 123 | 2.30E-31 | ||
| Pfam | 375 | 491 | 117 | 8.70E-20 | ||
| PANTHER | 513 | 868 | 356 | 0 | – | |
| PANTHER | 513 | 868 | 356 | 0 | – | |
| SUPERFAMILY | 549 | 621 | 73 | 2.45E-16 | ||
| Pfam | 562 | 621 | 60 | 4.80E-19 | ||
| Gene3D | 562 | 622 | 61 | 2.60E-18 | ||
| CDD | 562 | 621 | 60 | 2.88E-28 | ||
| MobiDBLite | 675 | 696 | 22 | – | – | |
| SUPERFAMILY | 794 | 845 | 52 | 2.12E-07 | – | |
| Gene3D | 795 | 844 | 50 | 3.10E-06 | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Biological process | Guanosine tetraphosphate metabolic process | The chemical reactions and pathways involving guanine tetraphosphate (5'-ppGpp-3'), a derivative of guanine riboside with four phosphates. |
Expression pattern of Lj1g3v4875630.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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A list of the top 25 highly co-expressed genes of Lj1g3v4875630.1, powered by CORGI.
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