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LSm7
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Biological process | MRNA splicing, via spliceosome | The joining together of exons from one or more primary transcripts of messenger RNA (mRNA) and the excision of intron sequences, via a spliceosomal mechanism, so that mRNA consisting only of the joined exons is produced. | ||
| Biological process | Nuclear-transcribed mRNA catabolic process | The chemical reactions and pathways resulting in the breakdown of nuclear-transcribed mRNAs in eukaryotic cells. |
| Transcript | Name | Description | Predicted domains | Domain count |
|---|---|---|---|---|
| – | PREDICTED: U6 snRNA-associated Sm-like protein LSm7-like [Glycine max] gi|356512406|ref|XP_003524910.1| | 11 | ||
| – | PREDICTED: U6 snRNA-associated Sm-like protein LSm7-like [Glycine max] gi|356512406|ref|XP_003524910.1| | 10 | ||
| – | Small nuclear ribonucleoprotein family protein; TAIR: AT2G03870.1 Small nuclear ribonucleoprotein family protein; Swiss-Prot: sp|Q9SI54|LSM7_ARATH Sm-like protein LSM7; TrEMBL-Plants: tr|I3SC15|I3SC15_LOTJA Uncharacterized protein; Found in the gene: LotjaGi3g1v0058700 | 11 | ||
| – | Small nuclear ribonucleoprotein family protein; TAIR: AT2G03870.1 Small nuclear ribonucleoprotein family protein; Swiss-Prot: sp|Q9SI54|LSM7_ARATH Sm-like protein LSM7; TrEMBL-Plants: tr|I3SC15|I3SC15_LOTJA Uncharacterized protein; Found in the gene: LotjaGi3g1v0058700 | 11 | ||
| – | Small nuclear ribonucleoprotein family protein; TAIR: AT2G03870.1 Small nuclear ribonucleoprotein family protein; Swiss-Prot: sp|Q9SI54|LSM7_ARATH Sm-like protein LSM7; TrEMBL-Plants: tr|I3SC15|I3SC15_LOTJA Uncharacterized protein; Found in the gene: LotjaGi3g1v0058700 | 11 | ||
| – | Small nuclear ribonucleoprotein family protein; TAIR: AT2G03870.1 Small nuclear ribonucleoprotein family protein; Swiss-Prot: sp|Q9SI54|LSM7_ARATH Sm-like protein LSM7; TrEMBL-Plants: tr|I3SC15|I3SC15_LOTJA Uncharacterized protein; Found in the gene: LotjaGi3g1v0058700 | 11 |
A list of co-occurring predicted domains within the L. japonicus gene space:
| Predicted domain | Source | Observations | Saturation (%) |
|---|---|---|---|
| cd01729 | CDD | 1 | 16.67 |