Domain Predictions — View

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cd02393

Source: CDD

Description

PNPase_KH

Associated GO terms

Unable to find any GO terms for the transcript with the identifier.

Associated Lotus transcripts 3

Transcript	Name	Description	Predicted domains	Domain count
Lj1g3v3979350.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	PREDICTED: probable polyribonucleotide nucleotidyltransferase 1, chloroplastic-like [Cicer arietinum] gi\|502107284\|ref\|XP_004493216.1\|	Domains G3DSA:2.40.50.140 G3DSA:3.30.1370.10 IPR003029 IPR004087 IPR004088 IPR012162 IPR012340 IPR015847 IPR022967 PF00013 PF00575 PS50084 PS50126 PTHR11252 PTHR11252:SF0 SM00316 SM00322 SSF50249 SSF54791 SSF55666 cd02393 cd04472 mobidb-lite	23
Lj1g3v3979350.2 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	PREDICTED: probable polyribonucleotide nucleotidyltransferase 1, chloroplastic-like [Cicer arietinum] gi\|502107284\|ref\|XP_004493216.1\|	Domains G3DSA:1.10.10.400 G3DSA:2.40.50.140 G3DSA:3.30.1370.10 G3DSA:3.30.230.70 IPR001247 IPR003029 IPR004087 IPR004088 IPR012162 IPR012340 IPR015847 IPR015848 IPR020568 IPR022967 IPR027408 MF_01595 PF00013 PF00575 PF01138 PF03725 PS50084 PS50126 PTHR11252 PTHR11252:SF0 SM00316 SM00322 SSF46915 SSF50249 SSF54211 SSF54791 SSF55666 TIGR03591 cd02393 cd04472 cd11364 mobidb-lite	36
LotjaGi1g1v0648200.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Polyribonucleotide nucleotidyltransferase; TAIR: AT3G03710.1 polyribonucleotide nucleotidyltransferase; Swiss-Prot: sp\|Q69LE7\|PNP1_ORYSJ Probable polyribonucleotide nucleotidyltransferase 1, chloroplastic; TrEMBL-Plants: tr\|G7L1J6\|G7L1J6_MEDTR Polyribonucleotide nucleotidyltransferase; Found in the gene: LotjaGi1g1v0648200	Domains G3DSA:2.40.50.140 G3DSA:3.30.230.70 IPR001247 IPR003029 IPR004087 IPR004088 IPR012162 IPR012340 IPR015847 IPR020568 IPR022967 IPR027408 IPR036345 IPR036456 IPR036612 MF_01595 PF00013 PF00575 PF01138 PF03725 PS50084 PS50126 PTHR11252 PTHR11252:SF0 SM00316 SM00322 SSF46915 SSF50249 SSF54211 SSF54791 SSF55666 TIGR03591 cd02393 cd04472 cd11364 mobidb-lite	36

Co-occuring domains 1

A list of co-occurring predicted domains within the L. japonicus gene space:

Predicted domain	Source	Observations	Saturation (%)
mobidb-lite	MobiDBLite	1	33.33