Domain Predictions — View

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cd02642

Source: CDD

Description

R3H_encore_like

Associated GO terms

Unable to find any GO terms for the transcript with the identifier.

Associated Lotus transcripts 7

Transcript	Name	Description	Predicted domains	Domain count
Lj1g3v4093200.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	R3H domain-containing protein [Medicago truncatula] gi\|357509253\|ref\|XP_003624915.1\|	Domains G3DSA:3.30.1370.50 IPR001374 IPR024771 PF01424 PF12752 PS51061 PS51673 PTHR15672 PTHR15672:SF15 SM00393 SSF82708 cd02642 mobidb-lite	13
Lj5g3v1301180.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Os01g0100600 [Oryza sativa Japonica Group] gi\|115433958\|ref\|NP_001041737.1\|	Domains G3DSA:3.30.1370.50 IPR001374 IPR024771 PF01424 PF12752 PS51061 PS51673 PTHR15672 PTHR15672:SF16 SM00393 SSF82708 cd02642 mobidb-lite	13
Lj5g3v1774920.2 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	PREDICTED: R3H domain-containing protein 2-like [Cicer arietinum] gi\|502118292\|ref\|XP_004496195.1\|	Domains Coil G3DSA:3.30.1370.50 IPR001374 IPR024771 PF01424 PF12752 PS51061 PS51673 PTHR15672 SM00393 SSF82708 cd02642 mobidb-lite	13
LotjaGi1g1v0658800.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	R3h domain containing protein, putative; TAIR: AT3G56680.1 Single-stranded nucleic acid binding R3H protein; Swiss-Prot: sp\|A0JNC2\|R3HD2_BOVIN R3H domain-containing protein 2; TrEMBL-Plants: tr\|V7CXD9\|V7CXD9_PHAVU Uncharacterized protein; Found in the gene: LotjaGi1g1v0658800	Domains G3DSA:3.30.1370.50 IPR001374 IPR024771 IPR036867 PF01424 PF12752 PS51061 PS51673 PTHR15672 PTHR15672:SF15 SM00393 SSF82708 cd02642 mobidb-lite	14
LotjaGi5g1v0204000.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	R3H domain protein; TAIR: AT3G56680.1 Single-stranded nucleic acid binding R3H protein; Swiss-Prot: sp\|Q8MSX1\|ENC_DROME Protein encore; TrEMBL-Plants: tr\|I1LBV3\|I1LBV3_SOYBN Uncharacterized protein; Found in the gene: LotjaGi5g1v0204000	Domains G3DSA:3.30.1370.50 IPR001374 IPR024771 IPR036867 PF01424 PF12752 PS51061 PS51673 PTHR15672 PTHR15672:SF25 SM00393 SSF82708 cd02642 mobidb-lite	14
LotjaGi5g1v0267500.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	R3h domain containing protein, putative; TAIR: AT3G56680.1 Single-stranded nucleic acid binding R3H protein; Swiss-Prot: sp\|Q9DCB4\|ARP21_MOUSE cAMP-regulated phosphoprotein 21; TrEMBL-Plants: tr\|A0A0B2NZL5\|A0A0B2NZL5_GLYSO R3H domain-containing protein 2; Found in the gene: LotjaGi5g1v0267500	Domains Coil G3DSA:3.30.1370.50 IPR001374 IPR024771 IPR036867 PF01424 PF12752 PS51061 PS51673 PTHR15672 PTHR15672:SF8 SM00393 SSF82708 cd02642 mobidb-lite	15
LotjaGi5g1v0267500.2 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	R3h domain containing protein, putative; TAIR: AT3G56680.1 Single-stranded nucleic acid binding R3H protein; Swiss-Prot: sp\|Q80TM6\|R3HD2_MOUSE R3H domain-containing protein 2; TrEMBL-Plants: tr\|G7I367\|G7I367_MEDTR Single-stranded nucleic acid-binding protein R3H; Found in the gene: LotjaGi5g1v0267500	Domains G3DSA:3.30.1370.50 IPR001374 IPR024771 IPR036867 PF01424 PF12752 PS51061 PS51673 PTHR15672 PTHR15672:SF8 SM00393 SSF82708 cd02642 mobidb-lite	14

Co-occuring domains 1

A list of co-occurring predicted domains within the L. japonicus gene space:

Predicted domain	Source	Observations	Saturation (%)
mobidb-lite	MobiDBLite	1	14.29