Domain Predictions — View

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cd02877

Source: CDD

Description

GH18_hevamine_XipI_class_III

Associated GO terms

Unable to find any GO terms for the transcript with the identifier.

Associated Lotus transcripts 15

Transcript	Name	Description	Predicted domains	Domain count
Lj1g3v5021150.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	PREDICTED: acidic endochitinase [Vitis vinifera] gi\|225454383\|ref\|XP_002279147.1\|	Domains G3DSA:3.20.20.80 IPR001223 IPR001579 IPR013781 IPR017853 NON_CYTOPLASMIC_DOMAIN PF00704 PS01095 PTHR11177 PTHR11177:SF158 SIGNAL_PEPTIDE SIGNAL_PEPTIDE_C_REGION SIGNAL_PEPTIDE_H_REGION SIGNAL_PEPTIDE_N_REGION SSF51445 SignalP-noTM_EUK cd02877	17
Lj1g3v5021150.2 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	PREDICTED: acidic endochitinase [Vitis vinifera] gi\|225454383\|ref\|XP_002279147.1\|	Domains G3DSA:3.20.20.80 IPR001223 IPR001579 IPR013781 IPR017853 NON_CYTOPLASMIC_DOMAIN PF00704 PS01095 PTHR11177 PTHR11177:SF158 SIGNAL_PEPTIDE SIGNAL_PEPTIDE_C_REGION SIGNAL_PEPTIDE_H_REGION SIGNAL_PEPTIDE_N_REGION SSF51445 SignalP-noTM_EUK cd02877	17
Lj2g3v1267200.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	PREDICTED: acidic endochitinase-like [Cicer arietinum] gi\|502094104\|ref\|XP_004490140.1\|	Domains G3DSA:3.20.20.80 IPR001223 IPR001579 IPR013781 IPR017853 NON_CYTOPLASMIC_DOMAIN PF00704 PS01095 PTHR11177 PTHR11177:SF175 SIGNAL_PEPTIDE SIGNAL_PEPTIDE_C_REGION SIGNAL_PEPTIDE_H_REGION SIGNAL_PEPTIDE_N_REGION SSF51445 SignalP-TM_GRAM_POSITIVE SignalP-noTM_EUK SignalP-noTM_GRAM_NEGATIVE TMhelix cd02877	20
Lj3g3v0931350.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Chitinase homologue [Sesbania rostrata] gi\|2072742\|emb\|CAA88593.1\|	Domains G3DSA:3.20.20.80 IPR001223 IPR001579 IPR013781 IPR017853 NON_CYTOPLASMIC_DOMAIN PF00704 PS01095 PTHR11177 SIGNAL_PEPTIDE SIGNAL_PEPTIDE_C_REGION SIGNAL_PEPTIDE_H_REGION SIGNAL_PEPTIDE_N_REGION SSF51445 SignalP-TM_GRAM_POSITIVE SignalP-noTM_EUK SignalP-noTM_GRAM_NEGATIVE TMhelix cd02877	19
Lj3g3v0931360.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	PREDICTED: acidic endochitinase-like [Glycine max] gi\|356535818\|ref\|XP_003536440.1\|	Domains G3DSA:3.20.20.80 IPR001223 IPR001579 IPR013781 IPR017853 NON_CYTOPLASMIC_DOMAIN PF00704 PS01095 PTHR11177 SIGNAL_PEPTIDE SIGNAL_PEPTIDE_C_REGION SIGNAL_PEPTIDE_H_REGION SIGNAL_PEPTIDE_N_REGION SSF51445 SignalP-TM_GRAM_NEGATIVE SignalP-noTM_EUK TMhelix cd02877	18
Lj5g3v1190130.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	PREDICTED: acidic endochitinase-like [Glycine max] gi\|356567519\|ref\|XP_003551966.1\|	Domains G3DSA:3.20.20.80 IPR001223 IPR001579 IPR013781 IPR017853 NON_CYTOPLASMIC_DOMAIN PF00704 PS01095 PTHR11177 PTHR11177:SF175 SIGNAL_PEPTIDE SIGNAL_PEPTIDE_C_REGION SIGNAL_PEPTIDE_H_REGION SIGNAL_PEPTIDE_N_REGION SSF51445 SignalP-TM_GRAM_POSITIVE SignalP-noTM_EUK SignalP-noTM_GRAM_NEGATIVE TMhelix cd02877	20
Lj5g3v1961260.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Chitinase [Medicago truncatula] gi\|357443753\|ref\|XP_003592154.1\|	Domains G3DSA:3.20.20.80 IPR001223 IPR001579 IPR013781 IPR017853 NON_CYTOPLASMIC_DOMAIN PF00704 PS01095 PTHR11177 PTHR11177:SF161 SIGNAL_PEPTIDE SIGNAL_PEPTIDE_C_REGION SIGNAL_PEPTIDE_H_REGION SIGNAL_PEPTIDE_N_REGION SSF51445 SignalP-TM_GRAM_NEGATIVE SignalP-TM_GRAM_POSITIVE SignalP-noTM_EUK TMhelix cd02877	20
LotjaGi1g1v0788000.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Acidic endochitinase; TAIR: AT5G24090.1 chitinase A; Swiss-Prot: sp\|P23472\|CHLY_HEVBR Hevamine-A; TrEMBL-Plants: tr\|G7L2X2\|G7L2X2_MEDTR Class III chitinase; Found in the gene: LotjaGi1g1v0788000	Domains G3DSA:3.20.20.80 IPR001223 IPR001579 IPR017853 NON_CYTOPLASMIC_DOMAIN PF00704 PS01095 PTHR45708 PTHR45708:SF38 SIGNAL_PEPTIDE SIGNAL_PEPTIDE_C_REGION SIGNAL_PEPTIDE_H_REGION SIGNAL_PEPTIDE_N_REGION SSF51445 SignalP-noTM cd02877	16
LotjaGi1g1v0788000.2 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Acidic endochitinase; TAIR: AT5G24090.1 chitinase A; Swiss-Prot: sp\|P51614\|CHIT3_VITVI Acidic endochitinase; TrEMBL-Plants: tr\|B9I8R4\|B9I8R4_POPTR Chitinase family protein; Found in the gene: LotjaGi1g1v0788000	Domains G3DSA:3.20.20.80 IPR001223 IPR001579 IPR017853 NON_CYTOPLASMIC_DOMAIN PF00704 PS01095 PTHR45708 PTHR45708:SF38 SIGNAL_PEPTIDE SIGNAL_PEPTIDE_C_REGION SIGNAL_PEPTIDE_H_REGION SIGNAL_PEPTIDE_N_REGION SSF51445 SignalP-noTM cd02877	16
LotjaGi1g1v0788100.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Acidic endochitinase; TAIR: AT5G24090.1 chitinase A; Swiss-Prot: sp\|P23472\|CHLY_HEVBR Hevamine-A; TrEMBL-Plants: tr\|A0A0D2RDX8\|A0A0D2RDX8_GOSRA Uncharacterized protein; Found in the gene: LotjaGi1g1v0788100	Domains G3DSA:3.20.20.80 IPR001223 IPR001579 IPR017853 NON_CYTOPLASMIC_DOMAIN PF00704 PS01095 PTHR45708 PTHR45708:SF38 SIGNAL_PEPTIDE SIGNAL_PEPTIDE_C_REGION SIGNAL_PEPTIDE_H_REGION SIGNAL_PEPTIDE_N_REGION SSF51445 SignalP-noTM cd02877	16
LotjaGi2g1v0223200.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Acidic endochitinase; TAIR: AT5G24090.1 chitinase A; Swiss-Prot: sp\|P29024\|CHIA_PHAAN Acidic endochitinase; TrEMBL-Plants: tr\|I1N156\|I1N156_SOYBN Uncharacterized protein; Found in the gene: LotjaGi2g1v0223200	Domains G3DSA:3.20.20.80 IPR001223 IPR001579 IPR017853 NON_CYTOPLASMIC_DOMAIN PF00704 PS01095 PTHR45708 PTHR45708:SF33 SIGNAL_PEPTIDE SIGNAL_PEPTIDE_C_REGION SIGNAL_PEPTIDE_H_REGION SIGNAL_PEPTIDE_N_REGION SSF51445 SignalP-TM SignalP-noTM TMhelix cd02877	18
LotjaGi2g1v0297900.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Acidic endochitinase; TAIR: AT5G24090.1 chitinase A; Swiss-Prot: sp\|P29024\|CHIA_PHAAN Acidic endochitinase; TrEMBL-Plants: tr\|G7JXV4\|G7JXV4_MEDTR Chitinase; Found in the gene: LotjaGi2g1v0297900	Domains G3DSA:3.20.20.80 IPR001223 IPR001579 IPR017853 NON_CYTOPLASMIC_DOMAIN PF00704 PS01095 PTHR45708 PTHR45708:SF33 SIGNAL_PEPTIDE SIGNAL_PEPTIDE_C_REGION SIGNAL_PEPTIDE_H_REGION SIGNAL_PEPTIDE_N_REGION SSF51445 SignalP-TM SignalP-noTM TMhelix cd02877	18
LotjaGi5g1v0294000.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Acidic endochitinase; TAIR: AT5G24090.1 chitinase A; Swiss-Prot: sp\|P36908\|CHIA_CICAR Acidic endochitinase; TrEMBL-Plants: tr\|I3SK63\|I3SK63_LOTJA Uncharacterized protein; Found in the gene: LotjaGi5g1v0294000	Domains G3DSA:3.20.20.80 IPR001223 IPR001579 IPR017853 NON_CYTOPLASMIC_DOMAIN PF00704 PS01095 PTHR45708 PTHR45708:SF22 SIGNAL_PEPTIDE SIGNAL_PEPTIDE_C_REGION SIGNAL_PEPTIDE_H_REGION SIGNAL_PEPTIDE_N_REGION SSF51445 SignalP-TM SignalP-noTM TMhelix cd02877	18
LotjaGi5g1v0294100.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Acidic chitinase; TAIR: AT5G24090.1 chitinase A; Swiss-Prot: sp\|P29024\|CHIA_PHAAN Acidic endochitinase; TrEMBL-Plants: tr\|Q41401\|Q41401_SESRO Chitinase homologue; Found in the gene: LotjaGi5g1v0294100	Domains G3DSA:3.20.20.80 IPR001223 IPR001579 IPR017853 NON_CYTOPLASMIC_DOMAIN PF00704 PS01095 PTHR45708 PTHR45708:SF31 SIGNAL_PEPTIDE SIGNAL_PEPTIDE_C_REGION SIGNAL_PEPTIDE_H_REGION SIGNAL_PEPTIDE_N_REGION SSF51445 SignalP-TM SignalP-noTM TMhelix cd02877	18
LotjaGi5g1v0294200.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Acidic endochitinase; TAIR: AT5G24090.1 chitinase A; Swiss-Prot: sp\|P19172\|CHIA_ARATH Acidic endochitinase; TrEMBL-Plants: tr\|I3S5N5\|I3S5N5_LOTJA Uncharacterized protein; Found in the gene: LotjaGi5g1v0294200	Domains G3DSA:3.20.20.80 IPR001223 IPR001579 IPR017853 NON_CYTOPLASMIC_DOMAIN PF00704 PS01095 PTHR45708 PTHR45708:SF21 SIGNAL_PEPTIDE SIGNAL_PEPTIDE_C_REGION SIGNAL_PEPTIDE_H_REGION SIGNAL_PEPTIDE_N_REGION SSF51445 SignalP-TM SignalP-noTM TMhelix cd02877	18

Co-occuring domains 1

A list of co-occurring predicted domains within the L. japonicus gene space:

Predicted domain	Source	Observations	Saturation (%)
cd02877	CDD	1	6.67