Domain Predictions — View

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cd04318

Source: CDD

Description

EcAsnRS_like_N

Associated GO terms

Unable to find any GO terms for the transcript with the identifier.

Associated Lotus transcripts 7

Transcript	Name	Description	Predicted domains	Domain count
Lj0g3v0296079.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Asparaginyl-tRNA synthetase [Medicago truncatula] gi\|357513179\|ref\|XP_003626878.1\|	Domains Coil G3DSA:3.30.930.10 IPR004364 IPR018150 PF00152 PTHR22594 PTHR22594:SF36 SSF55681 cd04318	9
Lj4g3v1259110.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	PREDICTED: asparagine--tRNA ligase, chloroplastic/mitochondrial-like [Cicer arietinum] gi\|502152388\|ref\|XP_004508904.1\|	Domains G3DSA:2.40.50.140 G3DSA:3.30.930.10 IPR004364 IPR004365 IPR004522 IPR006195 IPR012340 IPR018150 PF00152 PF01336 PS50862 PTHR22594 PTHR22594:SF6 SSF50249 SSF55681 TIGR00457 cd04318	17
Lj4g3v1259110.2 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	PREDICTED: asparagine--tRNA ligase, chloroplastic/mitochondrial-like [Cicer arietinum] gi\|502152388\|ref\|XP_004508904.1\|	Domains Coil G3DSA:2.40.50.140 G3DSA:3.30.930.10 IPR002312 IPR004364 IPR004365 IPR004522 IPR006195 IPR012340 IPR018150 MF_00534 PF00152 PF01336 PR01042 PS50862 PTHR22594 PTHR22594:SF6 SSF50249 SSF55681 TIGR00457 cd00776 cd04318	22
Lj4g3v3020560.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	PREDICTED: asparagine--tRNA ligase, cytoplasmic 1-like [Cicer arietinum] gi\|502138744\|ref\|XP_004503515.1\|	Domains Coil G3DSA:1.10.287.10 G3DSA:2.40.50.140 G3DSA:3.30.930.10 IPR000738 IPR002312 IPR004364 IPR004365 IPR004522 IPR006195 IPR009068 IPR012340 IPR018150 MF_00534 PF00152 PF00458 PF01336 PR01042 PS50862 PS51185 PTHR22594 PTHR22594:SF34 SM00991 SSF50249 SSF55681 TIGR00457 cd00776 cd04318	28
LotjaGi3g1v0268500.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Asparagine-tRNA ligase; TAIR: AT3G07420.1 asparaginyl-tRNA synthetase 2; Swiss-Prot: sp\|Q9SW95\|SYNC2_ARATH Asparagine--tRNA ligase, cytoplasmic 2; TrEMBL-Plants: tr\|G7LED0\|G7LED0_MEDTR Asparagine-tRNA ligase; Found in the gene: LotjaGi3g1v0268500	Domains Coil IPR004364 PF00152 PTHR22594 PTHR22594:SF36 SSF55681 cd04318	7
LotjaGi4g1v0203000.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Asparagine-tRNA ligase; TAIR: AT4G17300.2 Class II aminoacyl-tRNA and biotin synthetases superfamily protein; Swiss-Prot: sp\|O48593\|SYNO_ARATH Asparagine--tRNA ligase, chloroplastic/mitochondrial; TrEMBL-Plants: tr\|G7JIW4\|G7JIW4_MEDTR Asparagine-tRNA ligase; Found in the gene: LotjaGi4g1v0203000	Domains Coil G3DSA:2.40.50.140 IPR002312 IPR004364 IPR004522 IPR006195 IPR012340 MF_00534 PF00152 PR01042 PS50862 PTHR22594 PTHR22594:SF46 SSF50249 SSF55681 TIGR00457 cd00776 cd04318	18
LotjaGi4g1v0442400.2 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Asparagine--tRNA ligase; TAIR: AT5G56680.1 Class II aminoacyl-tRNA and biotin synthetases superfamily protein; Swiss-Prot: sp\|Q9SW96\|SYNC1_ARATH Asparagine--tRNA ligase, cytoplasmic 1; TrEMBL-Plants: tr\|V7CQ72\|V7CQ72_PHAVU Uncharacterized protein; Found in the gene: LotjaGi4g1v0442400	Domains Coil G3DSA:1.10.287.10 G3DSA:2.40.50.140 IPR000738 IPR002312 IPR004364 IPR004365 IPR004522 IPR006195 IPR012340 MF_00534 PF00152 PF00458 PF01336 PR01042 PS50862 PS51185 PTHR22594 PTHR22594:SF34 SM00991 SSF50249 SSF55681 TIGR00457 cd00776 cd04318	25

Co-occuring domains 1

A list of co-occurring predicted domains within the L. japonicus gene space:

Predicted domain	Source	Observations	Saturation (%)
cd04318	CDD	1	14.29