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CSP_CDS
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
GO term | Namespace | Name | Definition | Relationships |
---|---|---|---|---|
Molecular function | Nucleic acid binding | Interacting selectively and non-covalently with any nucleic acid. |
Transcript | Name | Description | Predicted domains | Domain count |
---|---|---|---|---|
– | PREDICTED: glycine-rich protein 2-like [Cicer arietinum] gi|502144859|ref|XP_004505774.1| | 16 | ||
– | PREDICTED: cold shock protein 1-like [Cicer arietinum] gi|502153508|ref|XP_004509364.1| | 20 | ||
– | PREDICTED: DNA-binding protein HEXBP-like [Glycine max] gi|356559280|ref|XP_003547928.1| | 19 | ||
– | Cold shock protein; TAIR: AT2G21060.1 glycine-rich protein 2B; Swiss-Prot: sp|Q38896|CSP4_ARATH Cold shock domain-containing protein 4; TrEMBL-Plants: tr|A0A088FZS5|A0A088FZS5_CICAR Cold shock protein; Found in the gene: LotjaGi3g1v0522700 | 20 | ||
– | Cold shock protein, putative; TAIR: AT4G36020.1 cold shock domain protein 1; Swiss-Prot: sp|O65639|CSP1_ARATH Cold shock protein 1; TrEMBL-Plants: tr|A0A0S3R460|A0A0S3R460_PHAAN Uncharacterized protein; Found in the gene: LotjaGi4g1v0128600 | 22 | ||
– | Cold shock protein; TAIR: AT2G21060.1 glycine-rich protein 2B; Swiss-Prot: sp|P27484|GRP2_NICSY Glycine-rich protein 2; TrEMBL-Plants: tr|F6I111|F6I111_VITVI Putative uncharacterized protein; Found in the gene: LotjaGi5g1v0160000 | 21 | ||
– | Cold shock protein; TAIR: AT4G36020.2 cold shock domain protein 1; Swiss-Prot: sp|O65639|CSP1_ARATH Cold shock protein 1; TrEMBL-Plants: tr|V7AVE5|V7AVE5_PHAVU Uncharacterized protein; Found in the gene: LotjaGi6g1v0236800 | 20 | ||
– | Cold shock protein; TAIR: AT4G36020.1 cold shock domain protein 1; Swiss-Prot: sp|P27484|GRP2_NICSY Glycine-rich protein 2; TrEMBL-Plants: tr|I1LPN7|I1LPN7_SOYBN Uncharacterized protein; Found in the gene: LotjaGi6g1v0237000_LC | 20 |
A list of co-occurring predicted domains within the L. japonicus gene space:
Predicted domain | Source | Observations | Saturation (%) |
---|---|---|---|
cd04458 | CDD | 1 | 12.50 |