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cd04496

Source: CDD

Description

SSB_OBF

Associated GO terms

GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .

GO term Namespace Name Definition Relationships
GO:0003697
Molecular function Single-stranded DNA binding Interacting selectively and non-covalently with single-stranded DNA.
Subterm of

Associated Lotus transcripts 7

Transcript Name Description Predicted domains Domain count
Lj0g3v0056329.1
– PREDICTED: protein OSB2, chloroplastic-like [Cicer arietinum] gi|502115197|ref|XP_004495147.1|
Domains
12
Lj4g3v1784860.1
– PREDICTED: single-stranded DNA-binding protein, mitochondrial-like [Cicer arietinum] gi|502122587|ref|XP_004497818.1|
Domains
12
Lj5g3v1015150.1
– PREDICTED: protein OSB2, chloroplastic-like [Cicer arietinum] gi|502115197|ref|XP_004495147.1|
Domains
12
LotjaGi4g1v0262500.1
– Single-stranded DNA-binding protein; TAIR: AT3G18580.1 Nucleic acid-binding, OB-fold-like protein; Swiss-Prot: sp|Q84J78|SSBP_ARATH Single-stranded DNA-binding protein, mitochondrial; TrEMBL-Plants: tr|V7CAJ9|V7CAJ9_PHAVU Uncharacterized protein; Found in the gene: LotjaGi4g1v0262500
Domains
12
LotjaGi5g1v0174600.1
– Single-stranded DNA-binding protein; TAIR: AT4G20010.2 plastid transcriptionally active 9; Swiss-Prot: sp|Q8GXH3|OSB2_ARATH Protein OSB2, chloroplastic; TrEMBL-Plants: tr|A0A0R0KWQ4|A0A0R0KWQ4_SOYBN Uncharacterized protein; Found in the gene: LotjaGi5g1v0174600
Domains
11
LotjaGi5g1v0174600.2
– Single-stranded DNA-binding protein; TAIR: AT1G47720.1 Primosome PriB/single-strand DNA-binding protein; Swiss-Prot: sp|Q9SX99|OSB1_ARATH Protein OSB1, mitochondrial; TrEMBL-Plants: tr|I1JF51|I1JF51_SOYBN Uncharacterized protein; Found in the gene: LotjaGi5g1v0174600
Domains
11
LotjaGi5g1v0227500.1
– Single-stranded DNA-binding protein; TAIR: AT4G11060.1 mitochondrially targeted single-stranded DNA binding protein; Swiss-Prot: sp|Q84J78|SSBP_ARATH Single-stranded DNA-binding protein, mitochondrial; TrEMBL-Plants: tr|I3SK50|I3SK50_LOTJA Uncharacterized protein; Found in the gene: LotjaGi5g1v0227500
Domains
11

Co-occuring domains 1

A list of co-occurring predicted domains within the L. japonicus gene space:

Predicted domain Source Observations Saturation (%)
mobidb-lite MobiDBLite 1 14.29