Domain Predictions — View

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cd05931

Source: CDD

Description

FAAL

Associated GO terms

GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on April 27, 2020, while the GO metadata was last updated on April 27, 2020.

GO term	Namespace	Name	Definition	Relationships
GO:0008610 View details of GO:0008610 AmiGO InterPro QuickGO	Biological process	Lipid biosynthetic process	The chemical reactions and pathways resulting in the formation of lipids, compounds soluble in an organic solvent but not, or sparingly, in an aqueous solvent.	Subterm of GO:0006629 GO:1901576

Associated Lotus transcripts 6

Transcript	Name	Description	Predicted domains	Domain count
Lj0g3v0205559.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Bifunctional protein aas [Medicago truncatula] gi\|357454395\|ref\|XP_003597478.1\|	Domains CYTOPLASMIC_DOMAIN G3DSA:1.10.1200.10 G3DSA:2.160.10.10 G3DSA:2.30.38.10 G3DSA:3.30.300.30 G3DSA:3.40.50.980 G3DSA:3.50.50.60 IPR000873 IPR002937 IPR006162 IPR009081 IPR011004 IPR020806 IPR020845 IPR023753 NON_CYTOPLASMIC_DOMAIN PF00501 PF00550 PF01593 PR00419 PS00012 PS00455 PS50075 PTHR22754 SM00823 SSF47336 SSF51161 SSF51905 SSF56801 TMhelix TRANSMEMBRANE cd05931	32
Lj0g3v0205569.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–		Domains CYTOPLASMIC_DOMAIN G3DSA:1.10.1200.10 G3DSA:2.160.10.10 G3DSA:2.30.38.10 G3DSA:3.30.300.30 G3DSA:3.40.50.980 IPR000873 IPR006162 IPR009081 IPR020806 IPR020845 NON_CYTOPLASMIC_DOMAIN PF00501 PF00550 PS00012 PS00455 PS50075 PTHR22754 SM00823 SSF47336 SSF56801 TMhelix TRANSMEMBRANE cd05931	24
Lj0g3v0205569.2 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–		Domains CYTOPLASMIC_DOMAIN G3DSA:1.10.1200.10 G3DSA:2.160.10.10 G3DSA:2.30.38.10 G3DSA:2.40.180.10 G3DSA:3.30.300.30 G3DSA:3.40.50.980 IPR000873 IPR006162 IPR009081 IPR011004 IPR011614 IPR020806 IPR020835 IPR020845 NON_CYTOPLASMIC_DOMAIN PF00501 PF00550 PS00012 PS00455 PS50075 PTHR22754 SM00823 SSF47336 SSF51161 SSF56634 SSF56801 TMhelix TRANSMEMBRANE cd05931	30
Lj0g3v0205569.3 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–		Domains CYTOPLASMIC_DOMAIN G3DSA:1.10.1200.10 G3DSA:2.160.10.10 G3DSA:2.30.38.10 G3DSA:3.30.300.30 G3DSA:3.40.50.980 IPR000873 IPR006162 IPR009081 IPR011004 IPR020806 IPR020845 NON_CYTOPLASMIC_DOMAIN PF00501 PF00550 PS00012 PS00455 PS50075 PTHR22754 SM00823 SSF47336 SSF51161 SSF56801 TMhelix TRANSMEMBRANE cd05931	26
LotjaGi3g1v0292200.3 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	AMP-dependent synthetase and ligase family protein; TAIR: AT1G20480.1 AMP-dependent synthetase and ligase family protein; Swiss-Prot: sp\|B2HIM0\|FAA28_MYCMM Long-chain-fatty-acid--AMP ligase FadD28; TrEMBL-Plants: tr\|A0A0B2RJD7\|A0A0B2RJD7_GLYSO Long-chain-fatty-acid--AMP ligase FadD28; Found in the gene: LotjaGi3g1v0292200	Domains CYTOPLASMIC_DOMAIN G3DSA:1.10.1200.10 G3DSA:1.10.405.20 G3DSA:2.160.10.10 G3DSA:2.40.180.10 G3DSA:3.30.300.30 G3DSA:3.30.70.1990 G3DSA:3.40.50.12780 G3DSA:3.50.50.60 IPR000873 IPR001451 IPR002937 IPR006162 IPR009081 IPR011004 IPR011614 IPR018028 IPR020806 IPR020835 IPR020845 IPR036188 IPR036736 IPR037060 IPR040097 IPR042099 NON_CYTOPLASMIC_DOMAIN PF00199 PF00501 PF00550 PF01593 PF14602 PR00419 PS00012 PS00455 PS50075 PS51402 PTHR42841 PTHR42841:SF4 SM00823 SSF47336 SSF51161 SSF51905 SSF56634 SSF56801 TMhelix TRANSMEMBRANE cd05931 mobidb-lite	48
LotjaGi3g1v0496500.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Acyl-CoA ligase-like; TAIR: AT1G20480.1 AMP-dependent synthetase and ligase family protein; Swiss-Prot: sp\|B2HIM0\|FAA28_MYCMM Long-chain-fatty-acid--AMP ligase FadD28; TrEMBL-Plants: tr\|A0A0B2QZ83\|A0A0B2QZ83_GLYSO Long-chain-fatty-acid--AMP ligase FadD28; Found in the gene: LotjaGi3g1v0496500	Domains CYTOPLASMIC_DOMAIN G3DSA:1.10.1200.10 G3DSA:2.160.10.10 G3DSA:3.30.300.30 G3DSA:3.40.50.12780 G3DSA:3.50.50.60 IPR000873 IPR006162 IPR009081 IPR011004 IPR020845 IPR036188 IPR036736 IPR040097 IPR042099 NON_CYTOPLASMIC_DOMAIN PF00501 PF00550 PS00012 PS00455 PS50075 PTHR42841 PTHR42841:SF4 SSF47336 SSF51161 SSF56801 TMhelix TRANSMEMBRANE cd05931	29

Co-occuring domains 1

A list of co-occurring predicted domains within the L. japonicus gene space:

Predicted domain	Source	Observations	Saturation (%)
cd05931	CDD	1	16.67