Domain Predictions — View

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PTHR42841

Source: PANTHER

Description

No description is available for this domain.

Associated GO terms

Unable to find any GO terms for the transcript with the identifier.

Associated Lotus transcripts 7

Transcript	Name	Description	Predicted domains	Domain count
LotjaGi3g1v0292200.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Soluble pyridine nucleotide transhydrogenase; TAIR: AT3G23530.1 Cyclopropane-fatty-acyl-phospholipid synthase; Swiss-Prot: sp\|Q28007\|DPYD_BOVIN Dihydropyrimidine dehydrogenase [NADP](+)]; TrEMBL-Plants: tr\|A0A0B2RJD7\|A0A0B2RJD7_GLYSO Long-chain-fatty-acid--AMP ligase FadD28; Found in the gene: LotjaGi3g1v0292200	Domains CYTOPLASMIC_DOMAIN G3DSA:1.10.405.20 G3DSA:3.30.70.1990 G3DSA:3.50.50.60 IPR002937 IPR036188 NON_CYTOPLASMIC_DOMAIN PF01593 PR00419 PTHR42841 PTHR42841:SF4 SSF51905 TRANSMEMBRANE	13
LotjaGi3g1v0292200.2 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Long-chain-fatty-acid--AMP ligase FadD28; TAIR: AT1G77220.1 organic solute transporter ostalpha protein (DUF300); Swiss-Prot: sp\|Q8YK97\|LILIP_NOSS1 Linolenate 9R-lipoxygenase; TrEMBL-Plants: tr\|A0A0B2RJD7\|A0A0B2RJD7_GLYSO Long-chain-fatty-acid--AMP ligase FadD28; Found in the gene: LotjaGi3g1v0292200	Domains CYTOPLASMIC_DOMAIN G3DSA:2.160.10.10 G3DSA:2.40.180.10 IPR011004 IPR011614 IPR018028 IPR020835 IPR037060 NON_CYTOPLASMIC_DOMAIN PF00199 PS51402 PTHR42841 PTHR42841:SF4 SSF51161 SSF56634 TMhelix TRANSMEMBRANE mobidb-lite	18
LotjaGi3g1v0292200.3 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	AMP-dependent synthetase and ligase family protein; TAIR: AT1G20480.1 AMP-dependent synthetase and ligase family protein; Swiss-Prot: sp\|B2HIM0\|FAA28_MYCMM Long-chain-fatty-acid--AMP ligase FadD28; TrEMBL-Plants: tr\|A0A0B2RJD7\|A0A0B2RJD7_GLYSO Long-chain-fatty-acid--AMP ligase FadD28; Found in the gene: LotjaGi3g1v0292200	Domains CYTOPLASMIC_DOMAIN G3DSA:1.10.1200.10 G3DSA:1.10.405.20 G3DSA:2.160.10.10 G3DSA:2.40.180.10 G3DSA:3.30.300.30 G3DSA:3.30.70.1990 G3DSA:3.40.50.12780 G3DSA:3.50.50.60 IPR000873 IPR001451 IPR002937 IPR006162 IPR009081 IPR011004 IPR011614 IPR018028 IPR020806 IPR020835 IPR020845 IPR036188 IPR036736 IPR037060 IPR040097 IPR042099 NON_CYTOPLASMIC_DOMAIN PF00199 PF00501 PF00550 PF01593 PF14602 PR00419 PS00012 PS00455 PS50075 PS51402 PTHR42841 PTHR42841:SF4 SM00823 SSF47336 SSF51161 SSF51905 SSF56634 SSF56801 TMhelix TRANSMEMBRANE cd05931 mobidb-lite	48
LotjaGi3g1v0496500.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Acyl-CoA ligase-like; TAIR: AT1G20480.1 AMP-dependent synthetase and ligase family protein; Swiss-Prot: sp\|B2HIM0\|FAA28_MYCMM Long-chain-fatty-acid--AMP ligase FadD28; TrEMBL-Plants: tr\|A0A0B2QZ83\|A0A0B2QZ83_GLYSO Long-chain-fatty-acid--AMP ligase FadD28; Found in the gene: LotjaGi3g1v0496500	Domains CYTOPLASMIC_DOMAIN G3DSA:1.10.1200.10 G3DSA:2.160.10.10 G3DSA:3.30.300.30 G3DSA:3.40.50.12780 G3DSA:3.50.50.60 IPR000873 IPR006162 IPR009081 IPR011004 IPR020845 IPR036188 IPR036736 IPR040097 IPR042099 NON_CYTOPLASMIC_DOMAIN PF00501 PF00550 PS00012 PS00455 PS50075 PTHR42841 PTHR42841:SF4 SSF47336 SSF51161 SSF56801 TMhelix TRANSMEMBRANE cd05931	29
LotjaGi4g1v0032900.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Phytoene desaturase; TAIR: AT3G09580.1 FAD/NAD(P)-binding oxidoreductase family protein; Swiss-Prot: sp\|Q40406\|CRTI_NARPS Phytoene dehydrogenase, chloroplastic/chromoplastic; TrEMBL-Plants: tr\|V7CQ56\|V7CQ56_PHAVU Uncharacterized protein; Found in the gene: LotjaGi4g1v0032900	Domains G3DSA:3.50.50.60 IPR002937 IPR036188 PF01593 PTHR42841 PTHR42841:SF5 SSF51905	7
LotjaGi4g1v0142000_LC.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Long-chain-fatty-acid--AMP ligase FadD28; TAIR: AT1G16830.1 Pentatricopeptide repeat (PPR) superfamily protein; Swiss-Prot: sp\|B3QHK8\|RNH2_RHOPT Ribonuclease HII; TrEMBL-Plants: tr\|I3T512\|I3T512_LOTJA Uncharacterized protein; Found in the gene: LotjaGi4g1v0142000_LC	Domains G3DSA:1.10.405.10 G3DSA:3.50.50.60 IPR002937 IPR036188 PF01593 PTHR42841 PTHR42841:SF4 SSF51905	8
LotjaGi4g1v0142000_LC.2 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Long-chain-fatty-acid--AMP ligase FadD28; TAIR: AT5G49290.1 receptor like protein 56; Swiss-Prot: sp\|B3QHK8\|RNH2_RHOPT Ribonuclease HII; TrEMBL-Plants: tr\|I3T512\|I3T512_LOTJA Uncharacterized protein; Found in the gene: LotjaGi4g1v0142000_LC	Domains G3DSA:1.10.405.20 G3DSA:3.50.50.60 IPR002937 IPR036188 PF01593 PTHR42841 PTHR42841:SF4 SSF51905	8

Co-occuring domains 1

A list of co-occurring predicted domains within the L. japonicus gene space:

Predicted domain	Source	Observations	Saturation (%)
SSF51905	SUPERFAMILY	1	14.29