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Phosphopantetheine attachment site
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
GO term | Namespace | Name | Definition | Relationships |
---|---|---|---|---|
Molecular function | Phosphopantetheine binding | Interacting selectively and non-covalently with phosphopantetheine, the vitamin pantetheine 4'-(dihydrogen phosphate). |
Transcript | Name | Description | Predicted domains | Domain count |
---|---|---|---|---|
– | Bifunctional protein aas [Medicago truncatula] gi|357454395|ref|XP_003597478.1| | 32 | ||
– | 24 | |||
– | 30 | |||
– | 26 | |||
– | PREDICTED: acyl carrier protein 1, chloroplastic-like [Glycine max] gi|356535129|ref|XP_003536101.1| | 15 | ||
– | PREDICTED: acyl carrier protein 1, chloroplastic-like [Cicer arietinum] gi|502078834|ref|XP_004486070.1| | 16 | ||
– | AMP-dependent synthetase and ligase family protein; TAIR: AT1G20480.1 AMP-dependent synthetase and ligase family protein; Swiss-Prot: sp|B2HIM0|FAA28_MYCMM Long-chain-fatty-acid--AMP ligase FadD28; TrEMBL-Plants: tr|A0A0B2RJD7|A0A0B2RJD7_GLYSO Long-chain-fatty-acid--AMP ligase FadD28; Found in the gene: LotjaGi3g1v0292200 | 48 | ||
– | Acyl carrier protein; TAIR: AT4G25050.1 acyl carrier protein 4; Swiss-Prot: sp|P93092|ACP1_CASGL Acyl carrier protein 1, chloroplastic; TrEMBL-Plants: tr|I3T1G9|I3T1G9_LOTJA Acyl carrier protein; Found in the gene: LotjaGi4g1v0420700 | 15 | ||
– | Acyl carrier protein; TAIR: AT3G05020.1 acyl carrier protein 1; Swiss-Prot: sp|P93092|ACP1_CASGL Acyl carrier protein 1, chloroplastic; TrEMBL-Plants: tr|I3T3K1|I3T3K1_LOTJA Acyl carrier protein; Found in the gene: LotjaGi5g1v0217100 | 15 | ||
– | Acyl carrier protein; TAIR: AT1G54630.1 acyl carrier protein 3; Swiss-Prot: sp|P93092|ACP1_CASGL Acyl carrier protein 1, chloroplastic; TrEMBL-Plants: tr|I3SIS1|I3SIS1_LOTJA Acyl carrier protein; Found in the gene: LotjaGi6g1v0305200 | 16 |
A list of co-occurring predicted domains within the L. japonicus gene space:
Predicted domain | Source | Observations | Saturation (%) |
---|---|---|---|
TIGR00517 | TIGRFAM | 1 | 10.00 |