Your browser is unable to support new features implemented in HTML5 and CSS3 to render this site as intended. Your experience may suffer from functionality degradation but the site should remain usable. We strongly recommend the latest version of Google Chrome, OS X Safari or Mozilla Firefox. As Safari is bundled with OS X, if you are unable to upgrade to a newer version of OS X, we recommend using an open source browser. Dismiss message

PF01713

Source: Pfam

Description

Smr domain

Associated GO terms

Unable to find any GO terms for the transcript with the identifier.

Associated Lotus transcripts 8

Transcript Name Description Predicted domains Domain count
Lj0g3v0018339.1
– Smr (Small MutS Related) domain-containing protein [Arabidopsis thaliana] gi|15237740|ref|NP_200680.1|
Domains
10
Lj1g3v2908510.1
– Smr protein/MutS2 C-terminal [Medicago truncatula] gi|124359484|gb|ABN05922.1|
Domains
10
Lj4g3v0451120.1
– PREDICTED: mutS2 protein-like isoform 1 [Glycine max] gi|356521349|ref|XP_003529319.1|
Domains
21
Lj4g3v0451120.2
– PREDICTED: mutS2 protein-like isoform 1 [Glycine max] gi|356521349|ref|XP_003529319.1|
Domains
21
LotjaGi1g1v0492900.1
– Smr (Small MutS-related) domain protein; TAIR: AT5G23520.1 smr (Small MutS Related) domain-containing protein; Swiss-Prot: sp|Q86UW6|N4BP2_HUMAN NEDD4-binding protein 2; TrEMBL-Plants: tr|K7LFV6|K7LFV6_SOYBN Uncharacterized protein; Found in the gene: LotjaGi1g1v0492900
Domains
12
LotjaGi4g1v0055400.1
– DNA mismatch repair protein MutS2; TAIR: AT1G65070.2 DNA mismatch repair protein MutS, type 2; Swiss-Prot: sp|P73625|MUTS2_SYNY3 Endonuclease MutS2; TrEMBL-Plants: tr|I1KLI9|I1KLI9_SOYBN Uncharacterized protein; Found in the gene: LotjaGi4g1v0055400
Domains
24
LotjaGi5g1v0048800.1
– Smr domain-containing protein; TAIR: AT2G26280.1 CTC-interacting domain 7; Swiss-Prot: sp|O64843|CID7_ARATH Polyadenylate-binding protein-interacting protein 7; TrEMBL-Plants: tr|A0A072VDP3|A0A072VDP3_MEDTR Smr (Small MutS-related) domain protein; Found in the gene: LotjaGi5g1v0048800
Domains
16
LotjaGi6g1v0113600.1
– Smr domain-containing protein, putative; TAIR: AT5G58720.1 smr (Small MutS Related) domain-containing protein; Swiss-Prot: sp|O65573|Y5872_ARATH SMR domain-containing protein At5g58720; TrEMBL-Plants: tr|A0A1J7H576|A0A1J7H576_LUPAN Uncharacterized protein; Found in the gene: LotjaGi6g1v0113600
Domains
12

Co-occuring domains 1

A list of co-occurring predicted domains within the L. japonicus gene space:

Predicted domain Source Observations Saturation (%)
mobidb-lite MobiDBLite 1 12.50