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| Field | Value |
|---|---|
| Gene ID | Lj0g3v0246249 |
| Transcript ID | Lj0g3v0246249.2 |
| Related isoforms 1 | |
| Lotus japonicus genome version | MG20 v3.0 |
| Description | PREDICTED: LOW QUALITY PROTEIN: ABC transporter C family member 13-like [Cicer arietinum] gi|502080578|ref|XP_004486609.1| |
| Working Lj name | n.a. |
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| PANTHER | 1 | 364 | 364 | 1.40E-225 | – | |
| Phobius | 1 | 53 | 53 | – | – | |
| ProSiteProfiles | 1 | 113 | 113 | 15.555 | ||
| PANTHER | 1 | 364 | 364 | 1.40E-225 | – | |
| SUPERFAMILY | 2 | 129 | 128 | 1.83E-12 | ||
| Gene3D | 4 | 126 | 123 | 1.20E-07 | – | |
| Phobius | 54 | 78 | 25 | – | – | |
| TMHMM | 57 | 79 | 23 | – | – | |
| Phobius | 79 | 83 | 5 | – | – | |
| Phobius | 84 | 112 | 29 | – | – | |
| Phobius | 113 | 364 | 252 | – | – | |
| ProSiteProfiles | 157 | 364 | 208 | 16.5 | ||
| CDD | 159 | 360 | 202 | 5.78E-106 | – | |
| SUPERFAMILY | 163 | 362 | 200 | 1.40E-46 | ||
| Gene3D | 175 | 363 | 189 | 2.60E-53 | ||
| Pfam | 178 | 310 | 133 | 8.10E-16 | ||
| SMART | 187 | 361 | 175 | 1.50E-11 | ||
| ProSitePatterns | 285 | 299 | 15 | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | ATP binding | Interacting selectively and non-covalently with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator. | ||
| Cellular component | Integral component of membrane | The component of a membrane consisting of the gene products and protein complexes having at least some part of their peptide sequence embedded in the hydrophobic region of the membrane. | ||
| Molecular function | ATPase activity | Catalysis of the reaction: ATP + H2O = ADP + phosphate + 2 H+. May or may not be coupled to another reaction. | ||
| Molecular function | ATPase activity, coupled to transmembrane movement of substances | Catalysis of the reaction: ATP + H2O = ADP + phosphate, to directly drive the active transport of a substance across a membrane. | ||
| Biological process | Transmembrane transport | The process in which a solute is transported across a lipid bilayer, from one side of a membrane to the other. |
Expression pattern of Lj0g3v0246249.2, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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A list of the top 25 highly co-expressed genes of Lj0g3v0246249.2, powered by CORGI.
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