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| Field | Value |
|---|---|
| Gene ID | Lj0g3v0248789 |
| Transcript ID | Lj0g3v0248789.1 |
| Lotus japonicus genome version | MG20 v3.0 |
| Description | PREDICTED: protein ARABIDILLO 1-like [Glycine max] gi|356568604|ref|XP_003552500.1| |
| Working Lj name | n.a. |
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| Gene3D | 35 | 292 | 258 | 4.70E-37 | ||
| ProSiteProfiles | 36 | 82 | 47 | 8.544 | ||
| Pfam | 40 | 85 | 46 | 6.70E-06 | ||
| SMART | 42 | 82 | 41 | 2.40E-04 | ||
| SUPERFAMILY | 61 | 292 | 232 | 8.89E-22 | – | |
| SMART | 123 | 148 | 26 | 68 | ||
| SMART | 149 | 176 | 28 | 390 | ||
| SMART | 177 | 202 | 26 | 20 | ||
| SMART | 203 | 228 | 26 | 150 | ||
| PANTHER | 228 | 573 | 346 | 7.30E-70 | – | |
| PANTHER | 228 | 573 | 346 | 7.30E-70 | – | |
| SMART | 251 | 275 | 25 | 340 | ||
| Gene3D | 357 | 564 | 208 | 1.40E-41 | ||
| SUPERFAMILY | 381 | 549 | 169 | 6.78E-27 | ||
| SMART | 416 | 456 | 41 | 27 | ||
| Pfam | 421 | 455 | 35 | 1.40E-04 | ||
| CDD | 421 | 518 | 98 | 7.33E-12 | – | |
| ProSiteProfiles | 427 | 469 | 43 | 8.697 | ||
| SMART | 457 | 497 | 41 | 0.0081 | ||
| Pfam | 462 | 496 | 35 | 1.20E-05 | ||
| ProSiteProfiles | 468 | 510 | 43 | 11.812 | ||
| SMART | 498 | 541 | 44 | 4.50E-04 | ||
| Pfam | 499 | 541 | 43 | 5.70E-07 | ||
| ProSiteProfiles | 509 | 554 | 46 | 11.602 |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Protein binding | Interacting selectively and non-covalently with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules). |
Expression pattern of Lj0g3v0248789.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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A list of the top 25 highly co-expressed genes of Lj0g3v0248789.1, powered by CORGI.
Loading co-expressed genes from the dataset ljgea-geneid. This will take 20–30 seconds to construct.