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| Field | Value |
|---|---|
| Gene ID | Lj0g3v0300659 |
| Transcript ID | Lj0g3v0300659.1 |
| Lotus japonicus genome version | MG20 v3.0 |
| Description | cysteine proteinase [Lotus japonicus] gi|144905116|dbj|BAF56430.1| |
| Working Lj name | n.a. |
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| Phobius | 1 | 11 | 11 | – | – | |
| SignalP | 1 | 27 | 27 | – | – | |
| Phobius | 1 | 27 | 27 | – | – | |
| SignalP | 1 | 27 | 27 | – | – | |
| TMHMM | 5 | 27 | 23 | – | – | |
| PANTHER | 7 | 282 | 276 | 6.30E-162 | ||
| PANTHER | 7 | 282 | 276 | 6.30E-162 | – | |
| Phobius | 12 | 23 | 12 | – | – | |
| Phobius | 24 | 27 | 4 | – | – | |
| Phobius | 28 | 282 | 255 | – | – | |
| SUPERFAMILY | 57 | 280 | 224 | 6.64E-83 | – | |
| Gene3D | 61 | 206 | 146 | 9.60E-51 | – | |
| Pfam | 63 | 120 | 58 | 6.40E-19 | ||
| SMART | 63 | 120 | 58 | 2.80E-26 | ||
| Pfam | 148 | 205 | 58 | 3.00E-23 | ||
| SMART | 148 | 281 | 134 | 1.20E-52 | ||
| CDD | 149 | 280 | 132 | 5.25E-70 | – | |
| PRINTS | 166 | 181 | 16 | 5.70E-10 | ||
| ProSitePatterns | 166 | 177 | 12 | – | ||
| Pfam | 207 | 281 | 75 | 9.70E-27 | ||
| Gene3D | 207 | 281 | 75 | 1.30E-32 | – | |
| ProSitePatterns | 224 | 234 | 11 | – | ||
| PRINTS | 226 | 236 | 11 | 5.70E-10 | ||
| PRINTS | 241 | 247 | 7 | 5.70E-10 | ||
| ProSitePatterns | 241 | 260 | 20 | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Biological process | Proteolysis | The hydrolysis of proteins into smaller polypeptides and/or amino acids by cleavage of their peptide bonds. | ||
| Molecular function | Cysteine-type peptidase activity | Catalysis of the hydrolysis of peptide bonds in a polypeptide chain by a mechanism in which the sulfhydryl group of a cysteine residue at the active center acts as a nucleophile. |
Expression pattern of Lj0g3v0300659.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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A list of the top 25 highly co-expressed genes of Lj0g3v0300659.1, powered by CORGI.
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