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Field | Value |
---|---|
Gene ID | Lj0g3v0336519 |
Transcript ID | Lj0g3v0336519.1 |
Lotus japonicus genome version | MG20 v3.0 |
Description | PREDICTED: succinate dehydrogenase [ubiquinone] gi|502089528|ref|XP_004488937.1| |
Working Lj name | n.a. |
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
---|---|---|---|---|---|---|
PANTHER | 1 | 98 | 98 | 9.70E-67 | – | |
Gene3D | 1 | 39 | 39 | 1.30E-08 | ||
Pfam | 1 | 44 | 44 | 4.90E-08 | ||
TIGRFAM | 1 | 98 | 98 | 1.00E-27 | ||
SUPERFAMILY | 1 | 39 | 39 | 1.02E-06 | ||
PANTHER | 1 | 98 | 98 | 9.70E-67 | – | |
Gene3D | 40 | 98 | 59 | 1.80E-20 | – | |
SUPERFAMILY | 40 | 98 | 59 | 1.33E-13 | ||
ProSiteProfiles | 73 | 98 | 26 | 7.466 | ||
ProSitePatterns | 83 | 94 | 12 | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
GO term | Namespace | Name | Definition | Relationships |
---|---|---|---|---|
Biological process | Tricarboxylic acid cycle | A nearly universal metabolic pathway in which the acetyl group of acetyl coenzyme A is effectively oxidized to two CO2 and four pairs of electrons are transferred to coenzymes. The acetyl group combines with oxaloacetate to form citrate, which undergoes successive transformations to isocitrate, 2-oxoglutarate, succinyl-CoA, succinate, fumarate, malate, and oxaloacetate again, thus completing the cycle. In eukaryotes the tricarboxylic acid is confined to the mitochondria. See also glyoxylate cycle. | ||
Molecular function | Electron transfer activity | Any molecular entity that serves as an electron acceptor and electron donor in an electron transport chain. An electron transport chain is a process in which a series of electron carriers operate together to transfer electrons from donors to any of several different terminal electron acceptors to generate a transmembrane electrochemical gradient. | ||
Molecular function | Oxidoreductase activity | Catalysis of an oxidation-reduction (redox) reaction, a reversible chemical reaction in which the oxidation state of an atom or atoms within a molecule is altered. One substrate acts as a hydrogen or electron donor and becomes oxidized, while the other acts as hydrogen or electron acceptor and becomes reduced. | ||
Molecular function | Iron-sulfur cluster binding | Interacting selectively and non-covalently with an iron-sulfur cluster, a combination of iron and sulfur atoms. | ||
Biological process | Oxidation-reduction process | A metabolic process that results in the removal or addition of one or more electrons to or from a substance, with or without the concomitant removal or addition of a proton or protons. |
Expression pattern of Lj0g3v0336519.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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A list of the top 25 highly co-expressed genes of Lj0g3v0336519.1, powered by CORGI.
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