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| Field | Value |
|---|---|
| Gene ID | Lj1g3v0984190 |
| Transcript ID | Lj1g3v0984190.1 |
| Lotus japonicus genome version | MG20 v3.0 |
| Description | Phosphatidylinositol 4-kinase type 2-beta [Medicago truncatula] gi|357463917|ref|XP_003602240.1| |
| Working Lj name | n.a. |
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| PANTHER | 25 | 196 | 172 | 0 | – | |
| PANTHER | 25 | 196 | 172 | 0 | – | |
| ProSiteProfiles | 27 | 100 | 74 | 14.055 | ||
| SMART | 29 | 100 | 72 | 0.032 | ||
| SUPERFAMILY | 34 | 102 | 69 | 2.12E-15 | ||
| Gene3D | 34 | 100 | 67 | 1.00E-13 | – | |
| CDD | 34 | 100 | 67 | 9.81E-09 | – | |
| Pfam | 35 | 101 | 67 | 1.30E-14 | ||
| SUPERFAMILY | 101 | 181 | 81 | 7.14E-11 | ||
| ProSiteProfiles | 105 | 182 | 78 | 12.052 | ||
| SMART | 105 | 178 | 74 | 2.3 | ||
| Pfam | 107 | 179 | 73 | 3.70E-07 | ||
| Gene3D | 107 | 178 | 72 | 1.10E-09 | – | |
| PANTHER | 228 | 575 | 348 | 0 | – | |
| PANTHER | 228 | 575 | 348 | 0 | – | |
| Pfam | 269 | 526 | 258 | 8.70E-51 | ||
| SUPERFAMILY | 412 | 573 | 162 | 9.59E-08 |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Protein binding | Interacting selectively and non-covalently with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules). |
Expression pattern of Lj1g3v0984190.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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A list of the top 25 highly co-expressed genes of Lj1g3v0984190.1, powered by CORGI.
Loading co-expressed genes from the dataset ljgea-geneid. This will take 20–30 seconds to construct.