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| Field | Value |
|---|---|
| Gene ID | Lj1g3v1380860 |
| Transcript ID | Lj1g3v1380860.1 |
| Related isoforms 1 | |
| Lotus japonicus genome version | MG20 v3.0 |
| Description | PREDICTED: translation factor GUF1 homolog, chloroplastic-like [Cicer arietinum] gi|502137208|ref|XP_004503008.1| |
| Working Lj name | n.a. |
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| PANTHER | 73 | 456 | 384 | 0 | – | |
| PANTHER | 73 | 456 | 384 | 0 | – | |
| Hamap | 80 | 680 | 601 | 64.676 | ||
| Hamap | 83 | 681 | 599 | 286.45 | ||
| SUPERFAMILY | 83 | 284 | 202 | 3.71E-57 | ||
| ProSiteProfiles | 86 | 267 | 182 | 60.536 | ||
| Gene3D | 86 | 277 | 192 | 1.00E-59 | ||
| Pfam | 87 | 264 | 178 | 5.60E-54 | – | |
| TIGRFAM | 87 | 678 | 592 | 5.70E-290 | ||
| CDD | 89 | 266 | 178 | 2.12E-125 | – | |
| TIGRFAM | 89 | 258 | 170 | 1.20E-20 | ||
| PRINTS | 90 | 103 | 14 | 3.50E-14 | ||
| ProSitePatterns | 126 | 141 | 16 | – | ||
| PRINTS | 133 | 141 | 9 | 3.50E-14 | ||
| PRINTS | 157 | 167 | 11 | 3.50E-14 | ||
| PRINTS | 173 | 184 | 12 | 3.50E-14 | ||
| PRINTS | 209 | 218 | 10 | 3.50E-14 | ||
| SUPERFAMILY | 248 | 370 | 123 | 9.36E-28 | ||
| CDD | 274 | 359 | 86 | 1.83E-45 | – | |
| Gene3D | 278 | 372 | 95 | 4.00E-22 | – | |
| Pfam | 288 | 358 | 71 | 8.00E-10 | ||
| Gene3D | 375 | 452 | 78 | 2.50E-26 | – | |
| SUPERFAMILY | 375 | 453 | 79 | 3.60E-18 | ||
| PANTHER | 480 | 679 | 200 | 0 | – | |
| PANTHER | 480 | 679 | 200 | 0 | – | |
| SMART | 481 | 569 | 89 | 3.40E-04 | ||
| SUPERFAMILY | 482 | 576 | 95 | 2.25E-23 | ||
| Pfam | 482 | 569 | 88 | 2.80E-23 | ||
| Gene3D | 484 | 573 | 90 | 3.90E-21 | ||
| CDD | 484 | 563 | 80 | 7.29E-42 | – | |
| Pfam | 571 | 677 | 107 | 6.30E-48 |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | GTPase activity | Catalysis of the reaction: GTP + H2O = GDP + phosphate. | ||
| Molecular function | GTP binding | Interacting selectively and non-covalently with GTP, guanosine triphosphate. |
Expression pattern of Lj1g3v1380860.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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A list of the top 25 highly co-expressed genes of Lj1g3v1380860.1, powered by CORGI.
Loading co-expressed genes from the dataset ljgea-geneid. This will take 20–30 seconds to construct.