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| Field | Value |
|---|---|
| Gene ID | Lj1g3v1914990 |
| Transcript ID | Lj1g3v1914990.1 |
| Related isoforms 1 | |
| Lotus japonicus genome version | MG20 v3.0 |
| Description | PREDICTED: pleiotropic drug resistance protein 1-like [Glycine max] gi|356515478|ref|XP_003526427.1| |
| Working Lj name | n.a. |
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| Phobius | 1 | 519 | 519 | – | – | |
| Pfam | 85 | 142 | 58 | 1.30E-12 | ||
| CDD | 149 | 406 | 258 | 6.86E-69 | ||
| ProSiteProfiles | 151 | 424 | 274 | 14.893 | ||
| Gene3D | 162 | 249 | 88 | 3.70E-34 | ||
| SUPERFAMILY | 162 | 424 | 263 | 1.26E-32 | ||
| Pfam | 167 | 349 | 183 | 4.60E-13 | ||
| SMART | 176 | 408 | 233 | 1.80E-05 | ||
| PANTHER | 210 | 751 | 542 | 0 | – | |
| PANTHER | 210 | 751 | 542 | 0 | – | |
| Gene3D | 284 | 413 | 130 | 3.70E-34 | ||
| Pfam | 503 | 715 | 213 | 3.70E-40 | ||
| TMHMM | 519 | 541 | 23 | – | – | |
| Phobius | 520 | 541 | 22 | – | – | |
| Phobius | 542 | 552 | 11 | – | – | |
| TMHMM | 553 | 572 | 20 | – | – | |
| Phobius | 553 | 572 | 20 | – | – | |
| Phobius | 573 | 603 | 31 | – | – | |
| TMHMM | 604 | 626 | 23 | – | – | |
| Phobius | 604 | 626 | 23 | – | – | |
| Phobius | 627 | 637 | 11 | – | – | |
| Phobius | 638 | 657 | 20 | – | – | |
| TMHMM | 639 | 658 | 20 | – | – | |
| Phobius | 658 | 662 | 5 | – | – | |
| Phobius | 663 | 685 | 23 | – | – | |
| TMHMM | 663 | 685 | 23 | – | – | |
| Phobius | 686 | 745 | 60 | – | – | |
| Pfam | 720 | 783 | 64 | 4.70E-26 | ||
| TMHMM | 746 | 768 | 23 | – | – | |
| Phobius | 746 | 770 | 25 | – | – | |
| Phobius | 771 | 1197 | 427 | – | – | |
| MobiDBLite | 804 | 825 | 22 | – | – | |
| PANTHER | 840 | 1278 | 439 | 0 | – | |
| PANTHER | 840 | 1278 | 439 | 0 | – | |
| CDD | 849 | 1087 | 239 | 1.69E-95 | ||
| ProSiteProfiles | 852 | 1104 | 253 | 14.533 | ||
| SUPERFAMILY | 875 | 1081 | 207 | 2.92E-36 | ||
| Gene3D | 877 | 1087 | 211 | 2.30E-40 | ||
| Pfam | 880 | 1032 | 153 | 2.50E-20 | ||
| SMART | 889 | 1081 | 193 | 3.90E-11 | ||
| Pfam | 1177 | 1278 | 102 | 1.90E-23 | ||
| TMHMM | 1196 | 1218 | 23 | – | – | |
| Phobius | 1198 | 1216 | 19 | – | – | |
| Phobius | 1217 | 1227 | 11 | – | – | |
| Phobius | 1228 | 1244 | 17 | – | – | |
| Phobius | 1245 | 1278 | 34 | – | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | ATP binding | Interacting selectively and non-covalently with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator. | ||
| Cellular component | Membrane | A lipid bilayer along with all the proteins and protein complexes embedded in it an attached to it. | ||
| Molecular function | ATPase activity | Catalysis of the reaction: ATP + H2O = ADP + phosphate + 2 H+. May or may not be coupled to another reaction. |
Expression pattern of Lj1g3v1914990.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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A list of the top 25 highly co-expressed genes of Lj1g3v1914990.1, powered by CORGI.
Loading co-expressed genes from the dataset ljgea-geneid. This will take 20–30 seconds to construct.