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| Field | Value |
|---|---|
| Gene ID | Lj1g3v2268450 |
| Transcript ID | Lj1g3v2268450.1 |
| Lotus japonicus genome version | MG20 v3.0 |
| Description | PREDICTED: ATP-dependent zinc metalloprotease FTSH, chloroplastic-like [Cicer arietinum] gi|502131153|ref|XP_004500893.1| |
| Working Lj name | n.a. |
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| Phobius | 1 | 200 | 200 | – | – | |
| Hamap | 17 | 708 | 692 | 36.249 | ||
| MobiDBLite | 85 | 105 | 21 | – | – | |
| MobiDBLite | 111 | 130 | 20 | – | – | |
| PANTHER | 129 | 706 | 578 | 0 | – | |
| PANTHER | 129 | 706 | 578 | 0 | – | |
| Phobius | 201 | 223 | 23 | – | – | |
| TIGRFAM | 203 | 703 | 501 | 2.10E-221 | ||
| Phobius | 224 | 709 | 486 | – | – | |
| SUPERFAMILY | 256 | 500 | 245 | 1.91E-68 | ||
| Gene3D | 256 | 427 | 172 | 6.70E-60 | ||
| CDD | 263 | 428 | 166 | 3.52E-25 | – | |
| SMART | 292 | 431 | 140 | 2.80E-23 | ||
| Pfam | 297 | 428 | 132 | 1.10E-43 | ||
| ProSitePatterns | 399 | 417 | 19 | – | ||
| Gene3D | 430 | 503 | 74 | 2.70E-26 | – | |
| Pfam | 490 | 703 | 214 | 5.10E-81 | ||
| SUPERFAMILY | 510 | 704 | 195 | 1.02E-67 | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Metalloendopeptidase activity | Catalysis of the hydrolysis of internal, alpha-peptide bonds in a polypeptide chain by a mechanism in which water acts as a nucleophile, one or two metal ions hold the water molecule in place, and charged amino acid side chains are ligands for the metal ions. | ||
| Molecular function | ATP binding | Interacting selectively and non-covalently with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator. | ||
| Biological process | Proteolysis | The hydrolysis of proteins into smaller polypeptides and/or amino acids by cleavage of their peptide bonds. | ||
| Cellular component | Membrane | A lipid bilayer along with all the proteins and protein complexes embedded in it an attached to it. |
Expression pattern of Lj1g3v2268450.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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A list of the top 25 highly co-expressed genes of Lj1g3v2268450.1, powered by CORGI.
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