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| Field | Value |
|---|---|
| Gene ID | Lj1g3v4528450 |
| Transcript ID | Lj1g3v4528450.3 |
| Related isoforms 2 | |
| Lotus japonicus genome version | MG20 v3.0 |
| Description | Pleiotropic drug resistance protein [Medicago truncatula] gi|357510221|ref|XP_003625399.1| |
| Working Lj name | n.a. |
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| Phobius | 1 | 516 | 516 | – | – | |
| Coils | 71 | 94 | 24 | – | – | |
| Pfam | 88 | 139 | 52 | 2.20E-11 | ||
| ProSiteProfiles | 148 | 421 | 274 | 14.613 | ||
| CDD | 155 | 403 | 249 | 1.05E-70 | ||
| Gene3D | 158 | 246 | 89 | 2.00E-33 | ||
| SUPERFAMILY | 160 | 252 | 93 | 7.10E-32 | ||
| Pfam | 164 | 346 | 183 | 1.10E-14 | ||
| SMART | 173 | 398 | 226 | 9.40E-08 | ||
| PANTHER | 207 | 748 | 542 | 0 | – | |
| PANTHER | 207 | 748 | 542 | 0 | – | |
| SUPERFAMILY | 280 | 421 | 142 | 7.10E-32 | ||
| Gene3D | 281 | 410 | 130 | 2.00E-33 | ||
| Pfam | 500 | 712 | 213 | 2.90E-39 | ||
| TMHMM | 516 | 538 | 23 | – | – | |
| Phobius | 517 | 538 | 22 | – | – | |
| Phobius | 539 | 549 | 11 | – | – | |
| Phobius | 550 | 570 | 21 | – | – | |
| TMHMM | 550 | 572 | 23 | – | – | |
| Phobius | 571 | 600 | 30 | – | – | |
| TMHMM | 601 | 623 | 23 | – | – | |
| Phobius | 601 | 623 | 23 | – | – | |
| Phobius | 624 | 634 | 11 | – | – | |
| Phobius | 635 | 654 | 20 | – | – | |
| TMHMM | 636 | 655 | 20 | – | – | |
| Phobius | 655 | 659 | 5 | – | – | |
| TMHMM | 660 | 682 | 23 | – | – | |
| Phobius | 660 | 683 | 24 | – | – | |
| Phobius | 684 | 689 | 6 | – | – | |
| TMHMM | 689 | 708 | 20 | – | – | |
| Phobius | 690 | 708 | 19 | – | – | |
| Phobius | 709 | 742 | 34 | – | – | |
| Pfam | 717 | 780 | 64 | 5.40E-28 | ||
| Phobius | 743 | 770 | 28 | – | – | |
| TMHMM | 745 | 767 | 23 | – | – | |
| Phobius | 771 | 1191 | 421 | – | – | |
| MobiDBLite | 781 | 823 | 43 | – | – | |
| PANTHER | 843 | 1450 | 608 | 0 | – | |
| PANTHER | 843 | 1450 | 608 | 0 | – | |
| CDD | 846 | 1084 | 239 | 2.37E-98 | ||
| ProSiteProfiles | 849 | 1101 | 253 | 14.106 | ||
| SUPERFAMILY | 864 | 1085 | 222 | 6.36E-38 | ||
| Gene3D | 868 | 1085 | 218 | 3.10E-41 | ||
| Pfam | 877 | 1029 | 153 | 1.10E-19 | ||
| SMART | 886 | 1078 | 193 | 2.80E-11 | ||
| Pfam | 1174 | 1388 | 215 | 4.80E-55 | ||
| Phobius | 1192 | 1213 | 22 | – | – | |
| TMHMM | 1194 | 1216 | 23 | – | – | |
| Phobius | 1214 | 1224 | 11 | – | – | |
| Phobius | 1225 | 1245 | 21 | – | – | |
| TMHMM | 1231 | 1253 | 23 | – | – | |
| Phobius | 1246 | 1256 | 11 | – | – | |
| Phobius | 1257 | 1275 | 19 | – | – | |
| Phobius | 1276 | 1280 | 5 | – | – | |
| TMHMM | 1277 | 1299 | 23 | – | – | |
| Phobius | 1281 | 1301 | 21 | – | – | |
| Phobius | 1302 | 1307 | 6 | – | – | |
| Phobius | 1308 | 1326 | 19 | – | – | |
| TMHMM | 1309 | 1331 | 23 | – | – | |
| Phobius | 1327 | 1337 | 11 | – | – | |
| TMHMM | 1338 | 1360 | 23 | – | – | |
| Phobius | 1338 | 1358 | 21 | – | – | |
| Phobius | 1359 | 1369 | 11 | – | – | |
| Phobius | 1370 | 1389 | 20 | – | – | |
| Phobius | 1390 | 1418 | 29 | – | – | |
| Phobius | 1419 | 1442 | 24 | – | – | |
| TMHMM | 1420 | 1442 | 23 | – | – | |
| Phobius | 1443 | 1450 | 8 | – | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | ATP binding | Interacting selectively and non-covalently with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator. | ||
| Cellular component | Membrane | A lipid bilayer along with all the proteins and protein complexes embedded in it an attached to it. | ||
| Molecular function | ATPase activity | Catalysis of the reaction: ATP + H2O = ADP + phosphate + 2 H+. May or may not be coupled to another reaction. |
Expression pattern of Lj1g3v4528450.3, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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A list of the top 25 highly co-expressed genes of Lj1g3v4528450.3, powered by CORGI.
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