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| Field | Value |
|---|---|
| Gene ID | Lj1g3v4579410 |
| Transcript ID | Lj1g3v4579410.1 |
| Lotus japonicus genome version | MG20 v3.0 |
| Description | PREDICTED: dnaJ homolog subfamily C member 3 homolog [Glycine max] gi|356572429|ref|XP_003554371.1| |
| Working Lj name | n.a. |
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| Phobius | 1 | 12 | 12 | – | – | |
| TMHMM | 13 | 32 | 20 | – | – | |
| Phobius | 13 | 32 | 20 | – | – | |
| Phobius | 33 | 486 | 454 | – | – | |
| Gene3D | 45 | 131 | 87 | 1.70E-14 | ||
| ProSiteProfiles | 46 | 79 | 34 | 7.287 | ||
| SMART | 46 | 79 | 34 | 5.5 | ||
| ProSiteProfiles | 46 | 346 | 301 | 29.303 | ||
| PANTHER | 48 | 86 | 39 | 8.20E-109 | – | |
| PANTHER | 48 | 86 | 39 | 8.20E-109 | – | |
| SUPERFAMILY | 50 | 231 | 182 | 1.39E-26 | ||
| Pfam | 59 | 113 | 55 | 0.0041 | – | |
| SMART | 80 | 113 | 34 | 0.59 | ||
| ProSiteProfiles | 80 | 113 | 34 | 8.319 | ||
| SMART | 126 | 159 | 34 | 100 | ||
| ProSiteProfiles | 126 | 159 | 34 | 5.458 | ||
| Gene3D | 132 | 248 | 117 | 5.60E-14 | ||
| SMART | 195 | 228 | 34 | 0.0042 | ||
| ProSiteProfiles | 195 | 228 | 34 | 11.122 | ||
| Pfam | 196 | 228 | 33 | 2.50E-05 | ||
| Coils | 238 | 258 | 21 | – | – | |
| ProSiteProfiles | 241 | 274 | 34 | 5.871 | ||
| Gene3D | 249 | 368 | 120 | 1.60E-19 | ||
| ProSiteProfiles | 279 | 312 | 34 | 5.517 | ||
| SMART | 279 | 312 | 34 | 18 | ||
| SUPERFAMILY | 282 | 362 | 81 | 1.39E-26 | ||
| SMART | 313 | 346 | 34 | 14 | ||
| ProSiteProfiles | 313 | 346 | 34 | 7.611 | ||
| PANTHER | 352 | 486 | 135 | 8.20E-109 | – | |
| PANTHER | 352 | 486 | 135 | 8.20E-109 | – | |
| SUPERFAMILY | 360 | 471 | 112 | 9.16E-32 | ||
| SMART | 366 | 425 | 60 | 4.10E-30 | ||
| ProSiteProfiles | 367 | 433 | 67 | 22.305 | ||
| CDD | 367 | 422 | 56 | 9.81E-22 | ||
| Pfam | 367 | 430 | 64 | 5.50E-26 | ||
| Gene3D | 369 | 455 | 87 | 5.70E-33 | ||
| PRINTS | 369 | 387 | 19 | 6.90E-22 | ||
| PRINTS | 387 | 402 | 16 | 6.90E-22 | ||
| Coils | 403 | 423 | 21 | – | – | |
| PRINTS | 405 | 425 | 21 | 6.90E-22 | ||
| ProSitePatterns | 410 | 429 | 20 | – | ||
| PRINTS | 425 | 444 | 20 | 6.90E-22 |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Protein binding | Interacting selectively and non-covalently with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules). |
Expression pattern of Lj1g3v4579410.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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A list of the top 25 highly co-expressed genes of Lj1g3v4579410.1, powered by CORGI.
Loading co-expressed genes from the dataset ljgea-geneid. This will take 20–30 seconds to construct.