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| Field | Value |
|---|---|
| Gene ID | Lj1g3v4701870 |
| Transcript ID | Lj1g3v4701870.2 |
| Related isoforms 1 | |
| Lotus japonicus genome version | MG20 v3.0 |
| Description | PREDICTED: ABC transporter G family member 39-like [Cicer arietinum] gi|502111745|ref|XP_004494154.1| |
| Working Lj name | n.a. |
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| Phobius | 1 | 552 | 552 | – | – | |
| Coils | 121 | 141 | 21 | – | – | |
| Pfam | 124 | 175 | 52 | 2.30E-14 | ||
| ProSiteProfiles | 184 | 457 | 274 | 14.326 | ||
| CDD | 189 | 439 | 251 | 2.79E-71 | ||
| Gene3D | 195 | 282 | 88 | 1.60E-36 | ||
| SUPERFAMILY | 195 | 457 | 263 | 6.61E-34 | ||
| Pfam | 200 | 382 | 183 | 2.70E-16 | ||
| SMART | 209 | 434 | 226 | 1.50E-08 | ||
| PANTHER | 243 | 787 | 545 | 0 | – | |
| PANTHER | 243 | 787 | 545 | 0 | – | |
| Gene3D | 317 | 446 | 130 | 1.60E-36 | ||
| Pfam | 536 | 748 | 213 | 6.70E-36 | ||
| TMHMM | 552 | 574 | 23 | – | – | |
| Phobius | 553 | 574 | 22 | – | – | |
| Phobius | 575 | 588 | 14 | – | – | |
| Phobius | 589 | 612 | 24 | – | – | |
| TMHMM | 595 | 617 | 23 | – | – | |
| Phobius | 613 | 623 | 11 | – | – | |
| Phobius | 624 | 643 | 20 | – | – | |
| TMHMM | 637 | 659 | 23 | – | – | |
| Phobius | 644 | 648 | 5 | – | – | |
| Phobius | 649 | 665 | 17 | – | – | |
| Phobius | 666 | 671 | 6 | – | – | |
| Phobius | 672 | 690 | 19 | – | – | |
| TMHMM | 672 | 691 | 20 | – | – | |
| Phobius | 691 | 695 | 5 | – | – | |
| Phobius | 696 | 719 | 24 | – | – | |
| TMHMM | 696 | 718 | 23 | – | – | |
| Phobius | 720 | 725 | 6 | – | – | |
| TMHMM | 725 | 744 | 20 | – | – | |
| Phobius | 726 | 744 | 19 | – | – | |
| Phobius | 745 | 781 | 37 | – | – | |
| Pfam | 753 | 810 | 58 | 2.80E-22 | ||
| TMHMM | 782 | 804 | 23 | – | – | |
| Phobius | 782 | 804 | 23 | – | – | |
| Phobius | 805 | 821 | 17 | – | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | ATP binding | Interacting selectively and non-covalently with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator. | ||
| Cellular component | Membrane | A lipid bilayer along with all the proteins and protein complexes embedded in it an attached to it. | ||
| Molecular function | ATPase activity | Catalysis of the reaction: ATP + H2O = ADP + phosphate + 2 H+. May or may not be coupled to another reaction. |
Expression pattern of Lj1g3v4701870.2, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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A list of the top 25 highly co-expressed genes of Lj1g3v4701870.2, powered by CORGI.
Loading co-expressed genes from the dataset ljgea-geneid. This will take 20–30 seconds to construct.