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| Field | Value |
|---|---|
| Gene ID | Lj2g3v0636320 |
| Transcript ID | Lj2g3v0636320.1 |
| Lotus japonicus genome version | MG20 v3.0 |
| Description | PREDICTED: receptor-like protein 12-like [Glycine max] gi|356495069|ref|XP_003516403.1| |
| Working Lj name | n.a. |
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| SignalP | 1 | 30 | 30 | – | – | |
| Phobius | 1 | 9 | 9 | – | – | |
| Phobius | 1 | 30 | 30 | – | – | |
| PANTHER | 4 | 190 | 187 | 0 | – | |
| PANTHER | 4 | 190 | 187 | 0 | – | |
| TMHMM | 7 | 29 | 23 | – | – | |
| Phobius | 10 | 22 | 13 | – | – | |
| Phobius | 23 | 30 | 8 | – | – | |
| Phobius | 31 | 975 | 945 | – | – | |
| Gene3D | 32 | 330 | 299 | 2.10E-45 | ||
| Pfam | 34 | 75 | 42 | 1.10E-09 | ||
| SUPERFAMILY | 60 | 168 | 109 | 3.15E-38 | ||
| SMART | 103 | 126 | 24 | 150 | ||
| ProSiteProfiles | 105 | 126 | 22 | 5.055 | ||
| Pfam | 105 | 161 | 57 | 2.10E-07 | ||
| SUPERFAMILY | 201 | 366 | 166 | 3.15E-38 | ||
| PANTHER | 218 | 290 | 73 | 0 | – | |
| PANTHER | 218 | 290 | 73 | 0 | – | |
| SMART | 231 | 254 | 24 | 0.53 | ||
| ProSiteProfiles | 233 | 254 | 22 | 5.602 | ||
| ProSiteProfiles | 257 | 279 | 23 | 5.032 | ||
| Pfam | 330 | 351 | 22 | 0.56 | ||
| Gene3D | 331 | 467 | 137 | 6.80E-31 | ||
| SUPERFAMILY | 332 | 505 | 174 | 7.77E-57 | – | |
| PANTHER | 334 | 376 | 43 | 0 | – | |
| PANTHER | 334 | 376 | 43 | 0 | – | |
| SMART | 351 | 373 | 23 | 91 | ||
| Pfam | 353 | 366 | 14 | 0.78 | ||
| ProSiteProfiles | 353 | 375 | 23 | 5.679 | ||
| ProSiteProfiles | 376 | 398 | 23 | 4.562 | ||
| SMART | 399 | 423 | 25 | 13 | ||
| ProSiteProfiles | 401 | 423 | 23 | 6.334 | ||
| ProSiteProfiles | 425 | 446 | 22 | 4.878 | ||
| ProSiteProfiles | 449 | 471 | 23 | 6.334 | ||
| PANTHER | 450 | 1028 | 579 | 0 | – | |
| PRINTS | 450 | 463 | 14 | 2.80E-05 | – | |
| PANTHER | 450 | 1028 | 579 | 0 | – | |
| Gene3D | 468 | 604 | 137 | 7.90E-28 | ||
| ProSiteProfiles | 498 | 519 | 22 | 4.716 | ||
| SMART | 523 | 545 | 23 | 8.6 | ||
| Pfam | 524 | 583 | 60 | 2.00E-09 | ||
| ProSiteProfiles | 525 | 546 | 22 | 5.548 | ||
| SUPERFAMILY | 533 | 578 | 46 | 7.77E-57 | – | |
| SMART | 547 | 569 | 23 | 99 | ||
| ProSiteProfiles | 548 | 569 | 22 | 7.158 | ||
| SMART | 570 | 592 | 23 | 15 | ||
| ProSiteProfiles | 572 | 593 | 22 | 6.272 | ||
| SMART | 596 | 623 | 28 | 54 | ||
| ProSiteProfiles | 598 | 620 | 23 | 6.665 | ||
| Gene3D | 605 | 656 | 52 | 1.40E-06 | ||
| SUPERFAMILY | 626 | 758 | 133 | 7.77E-57 | – | |
| ProSiteProfiles | 643 | 665 | 23 | 4.947 | ||
| SMART | 669 | 693 | 25 | 150 | ||
| Gene3D | 671 | 797 | 127 | 3.20E-52 | ||
| ProSiteProfiles | 671 | 693 | 23 | 6.164 | ||
| ProSiteProfiles | 694 | 716 | 23 | 5.363 | ||
| Pfam | 695 | 753 | 59 | 1.70E-06 | ||
| ProSiteProfiles | 718 | 740 | 23 | 5.148 | ||
| SUPERFAMILY | 835 | 953 | 119 | 5.10E-24 | ||
| Pfam | 841 | 897 | 57 | 8.50E-07 | ||
| Gene3D | 842 | 952 | 111 | 3.20E-52 | ||
| SMART | 860 | 883 | 24 | 260 | ||
| ProSiteProfiles | 862 | 884 | 23 | 6.349 | ||
| PRINTS | 884 | 897 | 14 | 2.80E-05 | – | |
| SMART | 884 | 908 | 25 | 23 | ||
| ProSiteProfiles | 886 | 909 | 24 | 6.264 | ||
| ProSiteProfiles | 910 | 931 | 22 | 5.594 | ||
| TMHMM | 976 | 998 | 23 | – | – | |
| Phobius | 976 | 999 | 24 | – | – | |
| Phobius | 1000 | 1040 | 41 | – | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Protein binding | Interacting selectively and non-covalently with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules). |
Expression pattern of Lj2g3v0636320.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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A list of the top 25 highly co-expressed genes of Lj2g3v0636320.1, powered by CORGI.
Loading co-expressed genes from the dataset ljgea-geneid. This will take 20–30 seconds to construct.