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Lj2g3v0878940.1

Overview

Field Value
Gene ID Lj2g3v0878940
Transcript ID Lj2g3v0878940.1
Lotus japonicus genome version MG20 v3.0
Description PREDICTED: phosphoinositide 3-kinase regulatory subunit 4-like [Glycine max] gi|356497575|ref|XP_003517635.1|
Working Lj name n.a.

Sequence information

Domain prediction

Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.

Merging data from EBeye. Please wait…

Domains

Sorting

Prediction algorithm Identifier Start End Length E-value InterPro ID
PANTHER
PTHR17583
2 338 337 0 –
CDD
cd13980
16 303 288 5.57E-153 –
SUPERFAMILY
SSF56112
26 325 300 4.45E-38
IPR011009
Gene3D
G3DSA:3.30.200.20
26 133 108 7.10E-09 –
ProSiteProfiles
PS50011
27 307 281 23.015
IPR000719
SMART
SM00220
27 303 277 2.00E-12
IPR000719
Pfam
PF00069
29 292 264 1.20E-22
IPR000719
Gene3D
G3DSA:1.10.510.10
134 277 144 3.50E-21 –
ProSitePatterns
PS00108
145 157 13 –
IPR008271
Gene3D
G3DSA:1.25.10.10
278 367 90 2.40E-61
IPR011989
SUPERFAMILY
SSF48371
281 366 86 3.25E-33
IPR016024
PANTHER
PTHR17583
390 1478 1089 0 –
SUPERFAMILY
SSF48371
430 826 397 3.25E-33
IPR016024
Gene3D
G3DSA:1.25.10.10
488 827 340 2.40E-61
IPR011989
Pfam
PF02985
530 558 29 0.001
IPR000357
ProSiteProfiles
PS50077
698 736 39 9.14
IPR021133
MobiDBLite
mobidb-lite
1068 1091 24 – –
Gene3D
G3DSA:2.130.10.10
1113 1442 330 2.90E-32
IPR015943
SMART
SM00320
1114 1153 40 7.10E-09
IPR001680
SUPERFAMILY
SSF50978
1115 1368 254 5.07E-33
IPR017986
Pfam
PF00400
1117 1153 37 2.50E-06
IPR001680
ProSiteProfiles
PS50082
1121 1153 33 14.953
IPR001680
ProSiteProfiles
PS50294
1121 1311 191 14.107
IPR017986
SMART
SM00320
1164 1201 38 9.8
IPR001680
SMART
SM00320
1261 1302 42 0.36
IPR001680
SMART
SM00320
1408 1442 35 55
IPR001680
SUPERFAMILY
SSF50978
1413 1442 30 5.07E-33
IPR017986

Gene function (GO predictions)

GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .

GO term Namespace Name Definition Relationships
GO:0004672
Molecular function Protein kinase activity Catalysis of the phosphorylation of an amino acid residue in a protein, usually according to the reaction: a protein + ATP = a phosphoprotein + ADP.
Subterm of
GO:0005515
Molecular function Protein binding Interacting selectively and non-covalently with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules).
Subterm of
GO:0005524
Molecular function ATP binding Interacting selectively and non-covalently with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator.
Subterm of
GO:0006468
Biological process Protein phosphorylation The process of introducing a phosphate group on to a protein.
Subterm of

Genome browser

LORE1 insertions 8

Expression data

Expression pattern

Expression pattern of Lj2g3v0878940.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.

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Co-expressed genes

A list of the top 25 highly co-expressed genes of Lj2g3v0878940.1, powered by CORGI.

Loading co-expressed genes from the dataset ljgea-geneid. This will take 20–30 seconds to construct.