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| Field | Value |
|---|---|
| Gene ID | Lj2g3v1155670 |
| Transcript ID | Lj2g3v1155670.1 |
| Lotus japonicus genome version | MG20 v3.0 |
| Description | PREDICTED: serine/threonine-protein phosphatase 2A 65 kDa regulatory subunit A beta isoform-like [Glycine max] gi|356499699|ref|XP_003518674.1| |
| Working Lj name | n.a. |
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| PANTHER | 1 | 551 | 551 | 0 | – | |
| PANTHER | 1 | 551 | 551 | 0 | – | |
| Phobius | 1 | 488 | 488 | – | – | |
| Gene3D | 3 | 547 | 545 | 1.30E-137 | ||
| SUPERFAMILY | 8 | 545 | 538 | 1.76E-98 | ||
| ProSiteProfiles | 10 | 48 | 39 | 9.899 | ||
| ProSiteProfiles | 87 | 125 | 39 | 8.606 | ||
| ProSiteProfiles | 164 | 202 | 39 | 9.056 | ||
| ProSiteProfiles | 203 | 241 | 39 | 9.674 | ||
| Pfam | 242 | 270 | 29 | 1.80E-04 | ||
| ProSiteProfiles | 242 | 280 | 39 | 13.693 | ||
| CDD | 280 | 378 | 99 | 8.10E-04 | – | |
| ProSiteProfiles | 281 | 319 | 39 | 12.878 | ||
| ProSiteProfiles | 320 | 358 | 39 | 12.147 | ||
| ProSiteProfiles | 359 | 397 | 39 | 12.765 | ||
| Pfam | 361 | 461 | 101 | 8.20E-11 | – | |
| ProSiteProfiles | 398 | 436 | 39 | 11.669 | ||
| Coils | 446 | 466 | 21 | – | – | |
| ProSiteProfiles | 476 | 514 | 39 | 9.871 | ||
| Phobius | 489 | 508 | 20 | – | – | |
| Phobius | 509 | 551 | 43 | – | – | |
| ProSiteProfiles | 515 | 551 | 37 | 9.955 |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Protein binding | Interacting selectively and non-covalently with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules). |
Expression pattern of Lj2g3v1155670.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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A list of the top 25 highly co-expressed genes of Lj2g3v1155670.1, powered by CORGI.
Loading co-expressed genes from the dataset ljgea-geneid. This will take 20–30 seconds to construct.