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| Field | Value |
|---|---|
| Gene ID | Lj2g3v1549760 |
| Transcript ID | Lj2g3v1549760.1 |
| Related isoforms 2 | |
| Lotus japonicus genome version | MG20 v3.0 |
| Description | PREDICTED: transcription initiation factor TFIID subunit 1-A-like [Glycine max] gi|356529777|ref|XP_003533464.1| |
| Working Lj name | n.a. |
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| PANTHER | 1 | 199 | 199 | 0 | – | |
| PANTHER | 1 | 199 | 199 | 0 | – | |
| PANTHER | 233 | 484 | 252 | 0 | – | |
| PANTHER | 233 | 484 | 252 | 0 | – | |
| MobiDBLite | 252 | 273 | 22 | – | – | |
| Pfam | 370 | 936 | 567 | 4.40E-124 | ||
| MobiDBLite | 378 | 397 | 20 | – | – | |
| SUPERFAMILY | 421 | 521 | 101 | 6.22E-15 | ||
| Gene3D | 445 | 522 | 78 | 3.20E-12 | – | |
| SMART | 451 | 523 | 73 | 1.10E-11 | ||
| ProSiteProfiles | 451 | 521 | 71 | 14.295 | ||
| Pfam | 453 | 523 | 71 | 2.80E-10 | ||
| CDD | 455 | 523 | 69 | 5.16E-08 | – | |
| PANTHER | 546 | 1260 | 715 | 0 | – | |
| PANTHER | 546 | 1260 | 715 | 0 | – | |
| MobiDBLite | 1022 | 1042 | 21 | – | – | |
| Coils | 1052 | 1072 | 21 | – | – | |
| MobiDBLite | 1230 | 1258 | 29 | – | – | |
| MobiDBLite | 1281 | 1302 | 22 | – | – | |
| PANTHER | 1312 | 1494 | 183 | 0 | – | |
| PANTHER | 1312 | 1494 | 183 | 0 | – | |
| Coils | 1456 | 1495 | 40 | – | – | |
| MobiDBLite | 1474 | 1522 | 49 | – | – | |
| PANTHER | 1525 | 1667 | 143 | 0 | – | |
| PANTHER | 1525 | 1667 | 143 | 0 | – | |
| SUPERFAMILY | 1535 | 1655 | 121 | 5.36E-27 | ||
| Gene3D | 1536 | 1628 | 93 | 3.60E-24 | ||
| SMART | 1543 | 1654 | 112 | 2.30E-23 | ||
| CDD | 1553 | 1649 | 97 | 2.15E-24 | – | |
| ProSiteProfiles | 1564 | 1634 | 71 | 19.178 | ||
| Pfam | 1565 | 1631 | 67 | 2.10E-18 | ||
| PRINTS | 1567 | 1580 | 14 | 2.40E-10 | ||
| ProSitePatterns | 1569 | 1626 | 58 | – | ||
| PRINTS | 1581 | 1597 | 17 | 2.40E-10 | ||
| PRINTS | 1597 | 1615 | 19 | 2.40E-10 | ||
| PRINTS | 1615 | 1634 | 20 | 2.40E-10 |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Protein binding | Interacting selectively and non-covalently with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules). |
Expression pattern of Lj2g3v1549760.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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A list of the top 25 highly co-expressed genes of Lj2g3v1549760.1, powered by CORGI.
Loading co-expressed genes from the dataset ljgea-geneid. This will take 20–30 seconds to construct.