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| Field | Value |
|---|---|
| Gene ID | Lj2g3v2904830 |
| Transcript ID | Lj2g3v2904830.1 |
| Lotus japonicus genome version | MG20 v3.0 |
| Description | CM0545.400.nc [Lotus japonicus] gi|164605529|dbj|BAF98595.1| |
| Working Lj name | n.a. |
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| Phobius | 1 | 8 | 8 | – | – | |
| PANTHER | 1 | 199 | 199 | 0 | – | |
| SignalP | 1 | 22 | 22 | – | – | |
| PANTHER | 1 | 199 | 199 | 0 | – | |
| Phobius | 1 | 28 | 28 | – | – | |
| TMHMM | 5 | 27 | 23 | – | – | |
| Phobius | 9 | 20 | 12 | – | – | |
| Phobius | 21 | 28 | 8 | – | – | |
| Phobius | 29 | 863 | 835 | – | – | |
| Pfam | 31 | 81 | 51 | 1.10E-09 | ||
| Gene3D | 63 | 210 | 148 | 2.10E-24 | ||
| SUPERFAMILY | 69 | 169 | 101 | 5.78E-49 | ||
| SMART | 110 | 135 | 26 | 200 | ||
| ProSiteProfiles | 112 | 133 | 22 | 5.155 | ||
| ProSiteProfiles | 137 | 159 | 23 | 5.209 | ||
| SUPERFAMILY | 205 | 482 | 278 | 5.78E-49 | ||
| Gene3D | 218 | 422 | 205 | 1.90E-45 | ||
| PANTHER | 228 | 339 | 112 | 0 | – | |
| PANTHER | 228 | 339 | 112 | 0 | – | |
| Pfam | 265 | 281 | 17 | 0.068 | ||
| SMART | 266 | 289 | 24 | 46 | ||
| ProSiteProfiles | 267 | 289 | 23 | 6.957 | ||
| ProSiteProfiles | 291 | 313 | 23 | 4.601 | ||
| SMART | 313 | 337 | 25 | 120 | ||
| ProSiteProfiles | 315 | 337 | 23 | 4.732 | ||
| ProSiteProfiles | 361 | 383 | 23 | 5.463 | ||
| Pfam | 362 | 413 | 52 | 1.30E-07 | ||
| PANTHER | 362 | 907 | 546 | 0 | – | |
| PANTHER | 362 | 907 | 546 | 0 | – | |
| SMART | 383 | 404 | 22 | 78 | ||
| ProSiteProfiles | 385 | 406 | 22 | 7.596 | ||
| PRINTS | 386 | 399 | 14 | 4.00E-06 | – | |
| Gene3D | 434 | 684 | 251 | 4.00E-47 | ||
| SMART | 458 | 481 | 24 | 100 | ||
| PRINTS | 458 | 471 | 14 | 4.00E-06 | – | |
| ProSiteProfiles | 460 | 481 | 22 | 7.065 | ||
| Pfam | 461 | 480 | 20 | 0.44 | ||
| SUPERFAMILY | 507 | 671 | 165 | 1.36E-56 | ||
| ProSiteProfiles | 534 | 555 | 22 | 4.678 | ||
| SMART | 556 | 579 | 24 | 41 | ||
| ProSiteProfiles | 558 | 580 | 23 | 5.271 | ||
| Pfam | 585 | 641 | 57 | 5.50E-07 | ||
| ProSiteProfiles | 606 | 627 | 22 | 6.372 | ||
| Gene3D | 724 | 835 | 112 | 4.90E-29 | ||
| SUPERFAMILY | 726 | 835 | 110 | 1.36E-56 | ||
| Pfam | 739 | 781 | 43 | 1.10E-07 | ||
| ProSiteProfiles | 746 | 769 | 24 | 6.541 | ||
| SMART | 768 | 791 | 24 | 11 | ||
| ProSiteProfiles | 770 | 793 | 24 | 7.235 | ||
| SMART | 792 | 815 | 24 | 120 | ||
| ProSiteProfiles | 794 | 815 | 22 | 5.286 | ||
| Phobius | 864 | 883 | 20 | – | – | |
| Phobius | 884 | 917 | 34 | – | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Protein binding | Interacting selectively and non-covalently with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules). |
Expression pattern of Lj2g3v2904830.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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A list of the top 25 highly co-expressed genes of Lj2g3v2904830.1, powered by CORGI.
Loading co-expressed genes from the dataset ljgea-geneid. This will take 20–30 seconds to construct.