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| Field | Value |
|---|---|
| Gene ID | Lj2g3v3223910 |
| Transcript ID | Lj2g3v3223910.1 |
| Lotus japonicus genome version | MG20 v3.0 |
| Description | PREDICTED: receptor-like protein 12-like [Glycine max] gi|356561446|ref|XP_003548992.1| |
| Working Lj name | n.a. |
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| SignalP | 1 | 24 | 24 | – | – | |
| Phobius | 1 | 28 | 28 | – | – | |
| SignalP | 1 | 24 | 24 | – | – | |
| Phobius | 1 | 3 | 3 | – | – | |
| PANTHER | 2 | 201 | 200 | 0 | – | |
| PANTHER | 2 | 201 | 200 | 0 | – | |
| Phobius | 4 | 16 | 13 | – | – | |
| Phobius | 17 | 28 | 12 | – | – | |
| Phobius | 29 | 944 | 916 | – | – | |
| Pfam | 32 | 86 | 55 | 1.60E-10 | ||
| SUPERFAMILY | 68 | 335 | 268 | 5.89E-44 | ||
| Gene3D | 69 | 195 | 127 | 1.10E-25 | ||
| Pfam | 114 | 129 | 16 | 0.5 | ||
| SMART | 115 | 140 | 26 | 17 | ||
| ProSiteProfiles | 117 | 137 | 21 | 4.816 | ||
| SMART | 164 | 190 | 27 | 220 | ||
| SMART | 164 | 193 | 30 | 320 | – | |
| ProSiteProfiles | 166 | 188 | 23 | 4.67 | ||
| ProSiteProfiles | 193 | 214 | 22 | 4.647 | ||
| Gene3D | 196 | 338 | 143 | 1.60E-22 | ||
| PANTHER | 224 | 511 | 288 | 0 | – | |
| PANTHER | 224 | 511 | 288 | 0 | – | |
| SMART | 237 | 258 | 22 | 180 | ||
| ProSiteProfiles | 239 | 262 | 24 | 5.602 | ||
| SUPERFAMILY | 260 | 572 | 313 | 4.16E-52 | – | |
| Pfam | 264 | 323 | 60 | 4.60E-07 | ||
| ProSiteProfiles | 288 | 311 | 24 | 6.21 | ||
| SMART | 310 | 334 | 25 | 17 | ||
| ProSiteProfiles | 312 | 334 | 23 | 6.911 | ||
| PRINTS | 313 | 326 | 14 | 1.50E-05 | – | |
| SMART | 334 | 360 | 27 | 700 | – | |
| ProSiteProfiles | 336 | 357 | 22 | 4.724 | ||
| Pfam | 338 | 395 | 58 | 2.20E-08 | ||
| Gene3D | 339 | 565 | 227 | 5.70E-54 | ||
| SMART | 358 | 381 | 24 | 160 | ||
| ProSiteProfiles | 360 | 382 | 23 | 4.516 | ||
| SMART | 382 | 406 | 25 | 5 | ||
| ProSiteProfiles | 384 | 406 | 23 | 5.925 | ||
| SMART | 406 | 432 | 27 | 20 | – | |
| Pfam | 408 | 467 | 60 | 1.40E-06 | ||
| SMART | 430 | 454 | 25 | 72 | ||
| ProSiteProfiles | 432 | 453 | 22 | 4.793 | ||
| ProSiteProfiles | 456 | 477 | 22 | 5.394 | ||
| Pfam | 477 | 491 | 15 | 0.75 | ||
| SMART | 477 | 500 | 24 | 45 | ||
| ProSiteProfiles | 478 | 500 | 23 | 7.442 | ||
| SMART | 500 | 527 | 28 | 250 | – | |
| ProSiteProfiles | 502 | 523 | 22 | 6.426 | ||
| ProSiteProfiles | 527 | 548 | 22 | 4.555 | ||
| ProSiteProfiles | 553 | 574 | 22 | 5.741 | ||
| Gene3D | 566 | 750 | 185 | 6.50E-44 | ||
| SUPERFAMILY | 569 | 755 | 187 | 5.44E-64 | ||
| PANTHER | 575 | 988 | 414 | 0 | – | |
| PANTHER | 575 | 988 | 414 | 0 | – | |
| PRINTS | 580 | 593 | 14 | 1.50E-05 | – | |
| SMART | 580 | 604 | 25 | 13 | ||
| SMART | 580 | 606 | 27 | 30 | – | |
| ProSiteProfiles | 582 | 604 | 23 | 6.642 | ||
| Pfam | 582 | 641 | 60 | 1.60E-08 | ||
| ProSiteProfiles | 606 | 629 | 24 | 5.54 | ||
| SMART | 628 | 651 | 24 | 220 | ||
| ProSiteProfiles | 630 | 651 | 22 | 4.901 | ||
| ProSiteProfiles | 654 | 677 | 24 | 5.078 | ||
| Pfam | 675 | 691 | 17 | 0.7 | ||
| SMART | 676 | 702 | 27 | 89 | – | |
| ProSiteProfiles | 678 | 701 | 24 | 6.695 | ||
| SMART | 700 | 723 | 24 | 180 | ||
| ProSiteProfiles | 702 | 723 | 22 | 4.601 | ||
| Gene3D | 803 | 914 | 112 | 1.40E-28 | ||
| SUPERFAMILY | 805 | 914 | 110 | 5.44E-64 | ||
| ProSiteProfiles | 825 | 844 | 20 | 5.048 | ||
| Pfam | 826 | 884 | 59 | 2.10E-07 | ||
| SMART | 847 | 871 | 25 | 52 | ||
| SMART | 847 | 873 | 27 | 97 | – | |
| ProSiteProfiles | 849 | 871 | 23 | 6.072 | ||
| ProSiteProfiles | 873 | 894 | 22 | 5.664 | ||
| TMHMM | 944 | 966 | 23 | – | – | |
| Phobius | 945 | 965 | 21 | – | – | |
| Phobius | 966 | 1002 | 37 | – | – | |
| MobiDBLite | 981 | 1002 | 22 | – | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Protein binding | Interacting selectively and non-covalently with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules). |
Expression pattern of Lj2g3v3223910.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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A list of the top 25 highly co-expressed genes of Lj2g3v3223910.1, powered by CORGI.
Loading co-expressed genes from the dataset ljgea-geneid. This will take 20–30 seconds to construct.