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| Field | Value |
|---|---|
| Gene ID | Lj3g3v1403990 |
| Transcript ID | Lj3g3v1403990.3 |
| Related isoforms 2 | |
| Lotus japonicus genome version | MG20 v3.0 |
| Description | Serine/threonine protein kinase Nek9 [Medicago truncatula] gi|357470133|ref|XP_003605351.1| |
| Working Lj name | n.a. |
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| MobiDBLite | 1 | 30 | 30 | – | – | |
| PANTHER | 1 | 811 | 811 | 0 | – | |
| PANTHER | 1 | 811 | 811 | 0 | – | |
| Gene3D | 33 | 419 | 387 | 7.10E-96 | ||
| SUPERFAMILY | 34 | 420 | 387 | 5.36E-90 | ||
| ProSiteProfiles | 35 | 93 | 59 | 9.077 | ||
| ProSiteProfiles | 94 | 144 | 51 | 13.137 | ||
| Pfam | 94 | 141 | 48 | 5.60E-08 | ||
| PRINTS | 96 | 112 | 17 | 2.70E-13 | ||
| PRINTS | 145 | 161 | 17 | 2.70E-13 | ||
| ProSiteProfiles | 145 | 199 | 55 | 13.64 | ||
| Pfam | 146 | 195 | 50 | 5.80E-09 | ||
| PRINTS | 186 | 202 | 17 | 2.70E-13 | ||
| Pfam | 199 | 248 | 50 | 5.60E-14 | ||
| ProSiteProfiles | 200 | 251 | 52 | 13.459 | ||
| PRINTS | 202 | 216 | 15 | 2.70E-13 | ||
| ProSitePatterns | 238 | 248 | 11 | – | ||
| ProSiteProfiles | 263 | 314 | 52 | 13.439 | ||
| Pfam | 265 | 311 | 47 | 3.50E-11 | ||
| PRINTS | 304 | 322 | 19 | 2.70E-13 | ||
| Pfam | 314 | 363 | 50 | 2.30E-06 | ||
| ProSiteProfiles | 315 | 366 | 52 | 13.117 | ||
| PRINTS | 362 | 383 | 22 | 2.70E-13 | ||
| ProSiteProfiles | 367 | 418 | 52 | 13.78 | ||
| Pfam | 368 | 415 | 48 | 1.40E-11 | ||
| SMART | 417 | 486 | 70 | 1.90E-17 | ||
| Pfam | 419 | 484 | 66 | 4.30E-13 | ||
| SUPERFAMILY | 419 | 485 | 67 | 2.54E-16 | ||
| Gene3D | 420 | 485 | 66 | 1.10E-16 | ||
| ProSiteProfiles | 423 | 485 | 63 | 11.523 | ||
| MobiDBLite | 575 | 612 | 38 | – | – | |
| Coils | 618 | 645 | 28 | – | – | |
| MobiDBLite | 871 | 894 | 24 | – | – | |
| MobiDBLite | 954 | 1000 | 47 | – | – | |
| ProSiteProfiles | 1007 | 1062 | 56 | 20.665 | ||
| Pfam | 1007 | 1061 | 55 | 5.20E-19 | ||
| PANTHER | 1009 | 1073 | 65 | 0 | – | |
| PANTHER | 1009 | 1073 | 65 | 0 | – | |
| Coils | 1090 | 1090 | 1 | – | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Metal ion binding | Interacting selectively and non-covalently with any metal ion. |
Expression pattern of Lj3g3v1403990.3, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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A list of the top 25 highly co-expressed genes of Lj3g3v1403990.3, powered by CORGI.
Loading co-expressed genes from the dataset ljgea-geneid. This will take 20–30 seconds to construct.