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Lj4g3v0071120.1

Overview

Field Value
Gene ID Lj4g3v0071120
Transcript ID Lj4g3v0071120.1
Lotus japonicus genome version MG20 v3.0
Description PREDICTED: probable leucine-rich repeat receptor-like protein kinase At5g49770-like [Cicer arietinum] gi|502079954|ref|XP_004486417.1|
Working Lj name n.a.

Sequence information

Domain prediction

Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.

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Domains

Sorting

Prediction algorithm Identifier Start End Length E-value InterPro ID
Phobius 1 8 8
PANTHER 1 168 168 0
Phobius 1 24 24
SignalP 1 24 24
PANTHER 1 168 168 0
Phobius 9 20 12
Phobius 21 24 4
Phobius 25 568 544
Gene3D 40 287 248 7.00E-57
SUPERFAMILY 55 408 354 4.76E-49
Gene3D 288 380 93 1.20E-13
Gene3D 561 655 95 3.30E-11
PANTHER 569 947 379 0
Phobius 569 592 24
PANTHER 569 947 379 0
TMHMM 570 592 23
Phobius 593 954 362
MobiDBLite 600 620 21
SUPERFAMILY 616 914 299 2.46E-74
SMART 642 913 272 4.60E-28
ProSiteProfiles 642 913 272 38.534
Pfam 643 907 265 4.60E-46
ProSitePatterns 648 670 23
CDD 648 912 265 7.87E-91
Gene3D 656 703 48 3.40E-26
Gene3D 704 926 223 6.00E-45
ProSitePatterns 762 774 13

Gene function (GO predictions)

GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .

GO term Namespace Name Definition Relationships
Molecular function Protein kinase activity Catalysis of the phosphorylation of an amino acid residue in a protein, usually according to the reaction: a protein + ATP = a phosphoprotein + ADP.
Molecular function ATP binding Interacting selectively and non-covalently with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator.
Biological process Protein phosphorylation The process of introducing a phosphate group on to a protein.

Expression data

Expression pattern

Expression pattern of Lj4g3v0071120.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.

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Co-expressed genes

A list of the top 25 highly co-expressed genes of Lj4g3v0071120.1, powered by CORGI.

Loading co-expressed genes from the dataset ljgea-geneid. This will take 20–30 seconds to construct.