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| Field | Value |
|---|---|
| Gene ID | Lj4g3v0450230 |
| Transcript ID | Lj4g3v0450230.1 |
| Lotus japonicus genome version | MG20 v3.0 |
| Description | PREDICTED: DNA repair protein RAD5-like [Cicer arietinum] gi|502077783|ref|XP_004485743.1| |
| Working Lj name | n.a. |
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| MobiDBLite | 1 | 20 | 20 | – | – | |
| PANTHER | 1 | 11 | 11 | 0 | – | |
| PANTHER | 1 | 11 | 11 | 0 | – | |
| PANTHER | 307 | 467 | 161 | 0 | – | |
| PANTHER | 307 | 467 | 161 | 0 | – | |
| SUPERFAMILY | 310 | 465 | 156 | 7.14E-46 | ||
| SMART | 320 | 595 | 276 | 5.50E-29 | ||
| Gene3D | 322 | 463 | 142 | 8.10E-27 | ||
| ProSiteProfiles | 339 | 578 | 240 | 14.049 | ||
| Pfam | 345 | 693 | 349 | 1.20E-69 | ||
| CDD | 346 | 560 | 215 | 1.30E-09 | – | |
| Gene3D | 511 | 579 | 69 | 8.10E-27 | ||
| SUPERFAMILY | 515 | 616 | 102 | 7.14E-46 | ||
| PANTHER | 517 | 695 | 179 | 0 | – | |
| PANTHER | 517 | 695 | 179 | 0 | – | |
| SUPERFAMILY | 624 | 696 | 73 | 3.94E-56 | ||
| Gene3D | 727 | 771 | 45 | 2.90E-10 | ||
| SUPERFAMILY | 729 | 789 | 61 | 3.12E-11 | – | |
| Pfam | 731 | 773 | 43 | 2.00E-07 | – | |
| CDD | 732 | 768 | 37 | 9.01E-08 | – | |
| SMART | 732 | 770 | 39 | 1.40E-06 | ||
| ProSiteProfiles | 732 | 771 | 40 | 10.748 | ||
| PANTHER | 747 | 772 | 26 | 0 | – | |
| PANTHER | 747 | 772 | 26 | 0 | – | |
| ProSitePatterns | 747 | 756 | 10 | – | ||
| PANTHER | 813 | 993 | 181 | 0 | – | |
| PANTHER | 813 | 993 | 181 | 0 | – | |
| SUPERFAMILY | 814 | 992 | 179 | 3.94E-56 | ||
| CDD | 819 | 943 | 125 | 1.85E-26 | – | |
| Gene3D | 820 | 964 | 145 | 2.60E-18 | ||
| ProSiteProfiles | 823 | 988 | 166 | 15.095 | ||
| Pfam | 823 | 935 | 113 | 2.80E-17 | ||
| SMART | 852 | 935 | 84 | 2.50E-17 |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | ATP binding | Interacting selectively and non-covalently with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator. |
Expression pattern of Lj4g3v0450230.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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A list of the top 25 highly co-expressed genes of Lj4g3v0450230.1, powered by CORGI.
Loading co-expressed genes from the dataset ljgea-geneid. This will take 20–30 seconds to construct.