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| Field | Value |
|---|---|
| Gene ID | Lj4g3v0485140 |
| Transcript ID | Lj4g3v0485140.1 |
| Lotus japonicus genome version | MG20 v3.0 |
| Description | PREDICTED: succinate dehydrogenase [ubiquinone] gi|502089528|ref|XP_004488937.1| |
| Working Lj name | n.a. |
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| PANTHER | 1 | 178 | 178 | 1.00E-130 | – | |
| PANTHER | 1 | 178 | 178 | 1.00E-130 | – | |
| SUPERFAMILY | 2 | 102 | 101 | 7.34E-30 | ||
| Gene3D | 2 | 102 | 101 | 4.90E-39 | ||
| Pfam | 3 | 107 | 105 | 1.10E-30 | ||
| TIGRFAM | 6 | 179 | 174 | 3.60E-60 | ||
| ProSiteProfiles | 15 | 93 | 79 | 8.891 | ||
| SUPERFAMILY | 103 | 178 | 76 | 1.52E-17 | ||
| Gene3D | 103 | 178 | 76 | 3.10E-27 | – | |
| ProSiteProfiles | 136 | 166 | 31 | 7.76 | ||
| ProSitePatterns | 146 | 157 | 12 | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Biological process | Tricarboxylic acid cycle | A nearly universal metabolic pathway in which the acetyl group of acetyl coenzyme A is effectively oxidized to two CO2 and four pairs of electrons are transferred to coenzymes. The acetyl group combines with oxaloacetate to form citrate, which undergoes successive transformations to isocitrate, 2-oxoglutarate, succinyl-CoA, succinate, fumarate, malate, and oxaloacetate again, thus completing the cycle. In eukaryotes the tricarboxylic acid is confined to the mitochondria. See also glyoxylate cycle. | ||
| Molecular function | Electron transfer activity | Any molecular entity that serves as an electron acceptor and electron donor in an electron transport chain. An electron transport chain is a process in which a series of electron carriers operate together to transfer electrons from donors to any of several different terminal electron acceptors to generate a transmembrane electrochemical gradient. | ||
| Molecular function | Oxidoreductase activity | Catalysis of an oxidation-reduction (redox) reaction, a reversible chemical reaction in which the oxidation state of an atom or atoms within a molecule is altered. One substrate acts as a hydrogen or electron donor and becomes oxidized, while the other acts as hydrogen or electron acceptor and becomes reduced. | ||
| Molecular function | Iron-sulfur cluster binding | Interacting selectively and non-covalently with an iron-sulfur cluster, a combination of iron and sulfur atoms. | ||
| Biological process | Oxidation-reduction process | A metabolic process that results in the removal or addition of one or more electrons to or from a substance, with or without the concomitant removal or addition of a proton or protons. |
Expression pattern of Lj4g3v0485140.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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A list of the top 25 highly co-expressed genes of Lj4g3v0485140.1, powered by CORGI.
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