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| Field | Value |
|---|---|
| Gene ID | Lj4g3v2249150 |
| Transcript ID | Lj4g3v2249150.1 |
| Lotus japonicus genome version | MG20 v3.0 |
| Description | PREDICTED: pleiotropic drug resistance protein 3-like [Glycine max] gi|356565445|ref|XP_003550950.1| |
| Working Lj name | n.a. |
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| Phobius | 1 | 541 | 541 | – | – | |
| Pfam | 114 | 164 | 51 | 1.30E-09 | ||
| ProSiteProfiles | 173 | 446 | 274 | 12.885 | ||
| Gene3D | 183 | 271 | 89 | 3.00E-32 | ||
| SUPERFAMILY | 184 | 277 | 94 | 7.09E-28 | ||
| CDD | 184 | 428 | 245 | 2.86E-69 | ||
| Pfam | 190 | 372 | 183 | 1.30E-13 | ||
| SMART | 198 | 431 | 234 | 9.60E-04 | ||
| PANTHER | 232 | 770 | 539 | 0 | – | |
| PANTHER | 232 | 770 | 539 | 0 | – | |
| SUPERFAMILY | 305 | 441 | 137 | 7.09E-28 | ||
| Gene3D | 306 | 433 | 128 | 3.00E-32 | ||
| Pfam | 525 | 736 | 212 | 1.50E-33 | ||
| Phobius | 542 | 563 | 22 | – | – | |
| TMHMM | 542 | 564 | 23 | – | – | |
| Phobius | 564 | 574 | 11 | – | – | |
| TMHMM | 571 | 593 | 23 | – | – | |
| Phobius | 575 | 593 | 19 | – | – | |
| Phobius | 594 | 624 | 31 | – | – | |
| Phobius | 625 | 647 | 23 | – | – | |
| TMHMM | 625 | 647 | 23 | – | – | |
| Phobius | 648 | 658 | 11 | – | – | |
| Phobius | 659 | 678 | 20 | – | – | |
| TMHMM | 660 | 679 | 20 | – | – | |
| Phobius | 679 | 683 | 5 | – | – | |
| Phobius | 684 | 705 | 22 | – | – | |
| TMHMM | 684 | 706 | 23 | – | – | |
| Phobius | 706 | 716 | 11 | – | – | |
| Phobius | 717 | 737 | 21 | – | – | |
| Phobius | 738 | 764 | 27 | – | – | |
| Pfam | 741 | 802 | 62 | 1.30E-22 | ||
| Phobius | 765 | 792 | 28 | – | – | |
| TMHMM | 765 | 787 | 23 | – | – | |
| Phobius | 793 | 1145 | 353 | – | – | |
| PANTHER | 839 | 1145 | 307 | 0 | – | |
| PANTHER | 839 | 1145 | 307 | 0 | – | |
| CDD | 848 | 1086 | 239 | 2.75E-87 | ||
| SUPERFAMILY | 863 | 1092 | 230 | 3.71E-38 | ||
| ProSiteProfiles | 864 | 1104 | 241 | 14.333 | ||
| Gene3D | 865 | 1091 | 227 | 7.70E-44 | ||
| Pfam | 879 | 1031 | 153 | 1.50E-20 | ||
| SMART | 888 | 1080 | 193 | 1.60E-08 |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | ATP binding | Interacting selectively and non-covalently with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator. | ||
| Cellular component | Membrane | A lipid bilayer along with all the proteins and protein complexes embedded in it an attached to it. | ||
| Molecular function | ATPase activity | Catalysis of the reaction: ATP + H2O = ADP + phosphate + 2 H+. May or may not be coupled to another reaction. |
Expression pattern of Lj4g3v2249150.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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A list of the top 25 highly co-expressed genes of Lj4g3v2249150.1, powered by CORGI.
Loading co-expressed genes from the dataset ljgea-geneid. This will take 20–30 seconds to construct.