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| Field | Value |
|---|---|
| Gene ID | Lj5g3v0540130 |
| Transcript ID | Lj5g3v0540130.1 |
| Lotus japonicus genome version | MG20 v3.0 |
| Description | PREDICTED: pleiotropic drug resistance protein 1-like [Glycine max] gi|356563840|ref|XP_003550166.1| |
| Working Lj name | n.a. |
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| Phobius | 1 | 520 | 520 | – | – | |
| Pfam | 92 | 143 | 52 | 9.60E-09 | ||
| CDD | 150 | 407 | 258 | 4.97E-70 | ||
| ProSiteProfiles | 152 | 425 | 274 | 15.166 | ||
| Gene3D | 162 | 250 | 89 | 6.60E-37 | ||
| SUPERFAMILY | 164 | 425 | 262 | 2.28E-34 | ||
| Pfam | 168 | 350 | 183 | 2.10E-16 | ||
| SMART | 177 | 402 | 226 | 6.70E-09 | ||
| PANTHER | 211 | 752 | 542 | 0 | – | |
| PANTHER | 211 | 752 | 542 | 0 | – | |
| Gene3D | 285 | 414 | 130 | 6.60E-37 | ||
| Pfam | 504 | 716 | 213 | 2.80E-41 | ||
| TMHMM | 520 | 542 | 23 | – | – | |
| Phobius | 521 | 542 | 22 | – | – | |
| Phobius | 543 | 553 | 11 | – | – | |
| TMHMM | 554 | 576 | 23 | – | – | |
| Phobius | 554 | 573 | 20 | – | – | |
| Phobius | 574 | 604 | 31 | – | – | |
| Phobius | 605 | 627 | 23 | – | – | |
| TMHMM | 605 | 627 | 23 | – | – | |
| Phobius | 628 | 638 | 11 | – | – | |
| Phobius | 639 | 658 | 20 | – | – | |
| TMHMM | 640 | 659 | 20 | – | – | |
| Phobius | 659 | 663 | 5 | – | – | |
| Phobius | 664 | 686 | 23 | – | – | |
| TMHMM | 664 | 686 | 23 | – | – | |
| Phobius | 687 | 746 | 60 | – | – | |
| Pfam | 721 | 782 | 62 | 3.20E-26 | ||
| TMHMM | 746 | 768 | 23 | – | – | |
| Phobius | 747 | 771 | 25 | – | – | |
| Phobius | 772 | 1194 | 423 | – | – | |
| MobiDBLite | 803 | 831 | 29 | – | – | |
| PANTHER | 836 | 1399 | 564 | 0 | – | |
| PANTHER | 836 | 1399 | 564 | 0 | – | |
| CDD | 846 | 1084 | 239 | 2.79E-93 | ||
| ProSiteProfiles | 849 | 1101 | 253 | 13.866 | ||
| SUPERFAMILY | 865 | 1079 | 215 | 7.30E-36 | ||
| Gene3D | 872 | 1082 | 211 | 2.90E-40 | ||
| Pfam | 877 | 1029 | 153 | 7.80E-19 | ||
| SMART | 886 | 1078 | 193 | 3.20E-11 | ||
| Pfam | 1175 | 1387 | 213 | 7.50E-57 | ||
| Phobius | 1195 | 1213 | 19 | – | – | |
| TMHMM | 1195 | 1217 | 23 | – | – | |
| Phobius | 1214 | 1224 | 11 | – | – | |
| Phobius | 1225 | 1252 | 28 | – | – | |
| TMHMM | 1230 | 1252 | 23 | – | – | |
| Phobius | 1253 | 1271 | 19 | – | – | |
| Phobius | 1272 | 1296 | 25 | – | – | |
| TMHMM | 1272 | 1294 | 23 | – | – | |
| Phobius | 1297 | 1307 | 11 | – | – | |
| TMHMM | 1306 | 1328 | 23 | – | – | |
| Phobius | 1308 | 1332 | 25 | – | – | |
| Phobius | 1333 | 1337 | 5 | – | – | |
| TMHMM | 1338 | 1360 | 23 | – | – | |
| Phobius | 1338 | 1357 | 20 | – | – | |
| Phobius | 1358 | 1368 | 11 | – | – | |
| TMHMM | 1367 | 1389 | 23 | – | – | |
| Phobius | 1369 | 1388 | 20 | – | – | |
| Phobius | 1389 | 1403 | 15 | – | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | ATP binding | Interacting selectively and non-covalently with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator. | ||
| Cellular component | Membrane | A lipid bilayer along with all the proteins and protein complexes embedded in it an attached to it. | ||
| Molecular function | ATPase activity | Catalysis of the reaction: ATP + H2O = ADP + phosphate + 2 H+. May or may not be coupled to another reaction. |
Expression pattern of Lj5g3v0540130.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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A list of the top 25 highly co-expressed genes of Lj5g3v0540130.1, powered by CORGI.
Loading co-expressed genes from the dataset ljgea-geneid. This will take 20–30 seconds to construct.