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| Field | Value |
|---|---|
| Gene ID | Lj5g3v1358170 |
| Transcript ID | Lj5g3v1358170.1 |
| Related isoforms 2 | |
| Lotus japonicus genome version | MG20 v3.0 |
| Description | Cell division protease ftsH-like protein [Medicago truncatula] gi|357441419|ref|XP_003590987.1| |
| Working Lj name | n.a. |
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| MobiDBLite | 1 | 40 | 40 | – | – | |
| Phobius | 1 | 605 | 605 | – | – | |
| Coils | 162 | 182 | 21 | – | – | |
| Coils | 226 | 246 | 21 | – | – | |
| Coils | 351 | 382 | 32 | – | – | |
| PANTHER | 387 | 648 | 262 | 0 | – | |
| PANTHER | 387 | 648 | 262 | 0 | – | |
| TMHMM | 514 | 536 | 23 | – | – | |
| Phobius | 606 | 625 | 20 | – | – | |
| TMHMM | 606 | 625 | 20 | – | – | |
| Phobius | 626 | 927 | 302 | – | – | |
| PANTHER | 672 | 893 | 222 | 0 | – | |
| PANTHER | 672 | 893 | 222 | 0 | – | |
| Gene3D | 680 | 898 | 219 | 3.90E-47 | ||
| SUPERFAMILY | 686 | 897 | 212 | 2.61E-41 | ||
| CDD | 701 | 862 | 162 | 1.07E-12 | – | |
| SMART | 725 | 865 | 141 | 5.80E-14 | ||
| Pfam | 729 | 862 | 134 | 4.00E-31 | ||
| Phobius | 928 | 946 | 19 | – | – | |
| Phobius | 947 | 1229 | 283 | – | – | |
| PANTHER | 959 | 1222 | 264 | 0 | – | |
| PANTHER | 959 | 1222 | 264 | 0 | – | |
| SUPERFAMILY | 999 | 1196 | 198 | 4.45E-32 | – | |
| Pfam | 1011 | 1185 | 175 | 5.30E-12 | ||
| MobiDBLite | 1207 | 1229 | 23 | – | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Metalloendopeptidase activity | Catalysis of the hydrolysis of internal, alpha-peptide bonds in a polypeptide chain by a mechanism in which water acts as a nucleophile, one or two metal ions hold the water molecule in place, and charged amino acid side chains are ligands for the metal ions. | ||
| Molecular function | ATP binding | Interacting selectively and non-covalently with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator. | ||
| Biological process | Proteolysis | The hydrolysis of proteins into smaller polypeptides and/or amino acids by cleavage of their peptide bonds. |
Expression pattern of Lj5g3v1358170.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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A list of the top 25 highly co-expressed genes of Lj5g3v1358170.1, powered by CORGI.
Loading co-expressed genes from the dataset ljgea-geneid. This will take 20–30 seconds to construct.