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| Field | Value |
|---|---|
| Gene ID | Lj5g3v1772520 |
| Transcript ID | Lj5g3v1772520.1 |
| Lotus japonicus genome version | MG20 v3.0 |
| Description | PREDICTED: pleiotropic drug resistance protein 2-like [Cicer arietinum] gi|502118284|ref|XP_004496191.1| |
| Working Lj name | n.a. |
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| Phobius | 1 | 543 | 543 | – | – | |
| Pfam | 117 | 166 | 50 | 1.50E-12 | ||
| ProSiteProfiles | 176 | 449 | 274 | 14.853 | ||
| Gene3D | 189 | 274 | 86 | 1.40E-36 | ||
| SUPERFAMILY | 190 | 449 | 260 | 6.65E-33 | ||
| Pfam | 192 | 374 | 183 | 3.20E-15 | ||
| SMART | 201 | 425 | 225 | 5.60E-10 | ||
| PANTHER | 235 | 779 | 545 | 0 | – | |
| PANTHER | 235 | 779 | 545 | 0 | – | |
| Gene3D | 309 | 438 | 130 | 1.40E-36 | ||
| Pfam | 528 | 740 | 213 | 3.70E-40 | ||
| Phobius | 544 | 566 | 23 | – | – | |
| TMHMM | 544 | 566 | 23 | – | – | |
| Phobius | 567 | 580 | 14 | – | – | |
| Phobius | 581 | 605 | 25 | – | – | |
| TMHMM | 587 | 609 | 23 | – | – | |
| Phobius | 606 | 616 | 11 | – | – | |
| Phobius | 617 | 635 | 19 | – | – | |
| TMHMM | 629 | 651 | 23 | – | – | |
| Phobius | 636 | 640 | 5 | – | – | |
| Phobius | 641 | 657 | 17 | – | – | |
| Phobius | 658 | 663 | 6 | – | – | |
| Phobius | 664 | 683 | 20 | – | – | |
| TMHMM | 664 | 683 | 20 | – | – | |
| Phobius | 684 | 688 | 5 | – | – | |
| TMHMM | 688 | 710 | 23 | – | – | |
| Phobius | 689 | 711 | 23 | – | – | |
| Phobius | 712 | 773 | 62 | – | – | |
| Pfam | 756 | 811 | 56 | 1.10E-25 | ||
| Phobius | 774 | 801 | 28 | – | – | |
| TMHMM | 776 | 798 | 23 | – | – | |
| Phobius | 802 | 1214 | 413 | – | – | |
| PANTHER | 857 | 1470 | 614 | 0 | – | |
| PANTHER | 857 | 1470 | 614 | 0 | – | |
| CDD | 866 | 1104 | 239 | 1.69E-99 | ||
| ProSiteProfiles | 869 | 1122 | 254 | 13.986 | ||
| SUPERFAMILY | 892 | 1108 | 217 | 6.51E-38 | ||
| Gene3D | 893 | 1111 | 219 | 3.40E-42 | ||
| Pfam | 897 | 1049 | 153 | 2.00E-18 | ||
| SMART | 906 | 1098 | 193 | 4.80E-13 | ||
| Pfam | 1194 | 1408 | 215 | 1.10E-52 | ||
| Phobius | 1215 | 1233 | 19 | – | – | |
| TMHMM | 1216 | 1233 | 18 | – | – | |
| Phobius | 1234 | 1244 | 11 | – | – | |
| TMHMM | 1245 | 1267 | 23 | – | – | |
| Phobius | 1245 | 1262 | 18 | – | – | |
| Phobius | 1263 | 1301 | 39 | – | – | |
| TMHMM | 1301 | 1323 | 23 | – | – | |
| Phobius | 1302 | 1323 | 22 | – | – | |
| Phobius | 1324 | 1329 | 6 | – | – | |
| Phobius | 1330 | 1352 | 23 | – | – | |
| TMHMM | 1330 | 1352 | 23 | – | – | |
| Phobius | 1353 | 1357 | 5 | – | – | |
| TMHMM | 1356 | 1378 | 23 | – | – | |
| Phobius | 1358 | 1378 | 21 | – | – | |
| Phobius | 1379 | 1384 | 6 | – | – | |
| TMHMM | 1385 | 1404 | 20 | – | – | |
| Phobius | 1385 | 1404 | 20 | – | – | |
| Phobius | 1405 | 1436 | 32 | – | – | |
| Phobius | 1437 | 1460 | 24 | – | – | |
| TMHMM | 1438 | 1460 | 23 | – | – | |
| Phobius | 1461 | 1470 | 10 | – | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | ATP binding | Interacting selectively and non-covalently with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator. | ||
| Cellular component | Membrane | A lipid bilayer along with all the proteins and protein complexes embedded in it an attached to it. | ||
| Molecular function | ATPase activity | Catalysis of the reaction: ATP + H2O = ADP + phosphate + 2 H+. May or may not be coupled to another reaction. |
Expression pattern of Lj5g3v1772520.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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A list of the top 25 highly co-expressed genes of Lj5g3v1772520.1, powered by CORGI.
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