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| Field | Value |
|---|---|
| Gene ID | Lj5g3v2062030 |
| Transcript ID | Lj5g3v2062030.1 |
| Lotus japonicus genome version | MG20 v3.0 |
| Description | Cysteine-rich receptor-like protein kinase [Medicago truncatula] gi|358347873|ref|XP_003637975.1| |
| Working Lj name | n.a. |
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| Phobius | 1 | 143 | 143 | – | – | |
| ProSiteProfiles | 15 | 122 | 108 | 20.517 | ||
| Pfam | 29 | 119 | 91 | 4.40E-14 | ||
| PANTHER | 52 | 533 | 482 | 2.60E-275 | – | |
| Gene3D | 131 | 221 | 91 | 1.30E-14 | ||
| Phobius | 144 | 168 | 25 | – | – | |
| TMHMM | 146 | 168 | 23 | – | – | |
| Phobius | 169 | 533 | 365 | – | – | |
| SUPERFAMILY | 194 | 492 | 299 | 1.48E-80 | ||
| SMART | 208 | 483 | 276 | 5.40E-26 | ||
| ProSiteProfiles | 208 | 483 | 276 | 36.485 | ||
| Pfam | 211 | 476 | 266 | 1.20E-50 | ||
| CDD | 214 | 480 | 267 | 1.06E-94 | – | |
| ProSitePatterns | 214 | 236 | 23 | – | ||
| Gene3D | 222 | 285 | 64 | 2.50E-24 | – | |
| Gene3D | 287 | 479 | 193 | 1.40E-44 | – | |
| ProSitePatterns | 329 | 341 | 13 | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Protein kinase activity | Catalysis of the phosphorylation of an amino acid residue in a protein, usually according to the reaction: a protein + ATP = a phosphoprotein + ADP. | ||
| Molecular function | ATP binding | Interacting selectively and non-covalently with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator. | ||
| Biological process | Protein phosphorylation | The process of introducing a phosphate group on to a protein. |
Expression pattern of Lj5g3v2062030.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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A list of the top 25 highly co-expressed genes of Lj5g3v2062030.1, powered by CORGI.
Loading co-expressed genes from the dataset ljgea-geneid. This will take 20–30 seconds to construct.